Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                             <-------                                                                                            <-------- ---->ZmHOX2a(1)                                                                           --------->ARR11(3) ------>TOE2(3)                <----------DOF2                                             <---------ARR11(3) -->ZmHOX2a(2)                <---------DAG2                                              --------->YAB1 --ZmHOX2a(2)              <-----------GT1                                               <---------YAB1 --->ARR11(3)           <---------------AtSPL8                                         --------->YAB1 --->ARR14(2)           <---------------AtSPL3                                         <---------ICU4 ----ARR11(3)           --------------->AtSPL8                 --------->At5g28300    <---------ATHB51 ----ARR14(2)        <---------TOE2(3)                        ----------->GT1         --------->ICU4-   cctcaaatgccaaatgtcaaattaagttagtacctttccatgtttacaaatttgaatttgaagatggtaaattagaagaaaaaatgaaattatgatcatt  2497500                                                                        --------->AHL20(2)    <------                                                                        <---------AHL20(2)    -------              <-------TEIL                                        ----------->GT1            -------- ------>ZmHOX2a(1)                                               --------->DAG2         ----------->GT1 -------->TOE2(3)           <---------AHL20(2)                  ---------->DOF2   --------->DAG2 --ICU4      --------->CCA1(2)     <-----------GT1        ---------->DOF2<---------ICU4----------->GT1 -YAB1--------->YAB1        --------->AHL20(2)       --------------->AGL15       ---------->DOF2 -------->TOE1(3)      <---------YAB1                <---------------AGL15       ====================   ttccttaatcaaaagattcaaaactatcatttaaaatttacttcttcattttttgctcttaaaagaaaaagtaaaaaattacaaaaagaggggaaaaaaa  2497600                             --------->ARR14(2)                             <---------ARR14(2)                           <----------DOF2                          <---------ANAC46                               <---------TGA1a                         <------NtERF2                                   --------->O2                        ------>NtERF2                                    --------->TGA1a                       <---------DEAR3(1)                                <---------O2                    <---------O2                                      <---------DEAR3(1)                    <---------TGA1a                                   --------->DEAR3(1)                    --------->TGA1a                                   ----------->HVH21                    ==================bZIP_DOF                       --------->RAP2.3(1)       ------                    ==================bZIP_DOF       <---------AHL20(2)------>NtERF2           ------                    --------->O2  <---------AtLEC2 <---------RVE1(1) <------NtERF2          ------>MYB46(1)                    --------->ANAC58               <---------CCA1(1)--------->LBD16       --------->AtMYB61       --------->DAG2 --------->RAP2.6(3)         <---------GLK1(2)<---------LBD16        <---------MYB111(2)      ========================bZIP_DOF            --------->ARR11(3)<---------ATERF1(1)   <---------MYB55(2)      ---------->DOF2--------->MYB52(1)           <---------ARR11(3)------>NtERF2         <---------MYB111(1) ---AHL20(2)        --------->ANAC46        <---------At5g28300    --------->LBD16        --------->MYB46(3) -->AHL20(2)        ----------->HVH21    <-----------HVH21        <---------LBD16         <---------MYB46(2) ->AHL20(2)         --------->ANAC58    <----------DOF2  <-----------GT1<------NtERF2    --------->ANAC46 =============================bZIP_DOF  ===========================================bZIP_DOF ------>MYB83   tttagagagaaagtgaccagacacgacggcgtttttgcatcactttcaccgagattttttttctgcatcccggcgacgagactgtgactccaccaaaccc  2497700                                                          --------->ZAT14                                                          --------->LBD16                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58                                                        --------->ANAC46                                                        <---------LBD16                    <---------GLK1(2)                                                  <---------HSFC1(2)                  --------->MYB52(1)       <------------CBF                           --------->HSFB2a(1)              --------->ANAC46      <---------ICU4                     --------->ARR14(2)                      <---------ALFIN1     <---------YAB1                      <---------ARR14(2)                    ------->GAMYB   --------->YAB1                   <---------ANAC46<-----------GT1           --------->ANAC46 --->TOE2(3)                      <---------ANAC46--------->HSFC1(2)        <---------DOF5.7(2) --->TOE1(3)                <---------YAB1        <---------HSFB2a(1)     --------->DOF5.7(2)      <-   taaaatcaaaattgcattttttgttcgattttgattttgtggggattttggaattttccccgcactaagtcgtctcgttaaccccacttaacagtttctc  2497800                                             ------------>CBF                                          <------NtERF2                                      <-----------HVH21                                 <----------DOF2                                <---------ANAC58                                                <----                                <---------ANAC58                                               ------                        ------->GAMYB<-----------RAV1(1)         <---------ALFIN1             -------       <----------DOF2 --------->ANAC58  ------>NtERF2  <---------DAG2                      --------- ---------DOF2         --------->ANAC58---------->ID1   <----------DOF2     <----------DOF2 <--------   actttgacactttctctctctctcaacgcacagtgctttctgtcgccttcaatcgcgactttttgtcacacttgccctcttttctccgatttttctataa  2497900                                                                    ---------->DOF2                                                                   <---------ICU4                                                                   -------->HAHB4      --------->YAB1                                                                   --------->YAB1     <---------HSFB2a(1)                                                                  <---------YAB1      <---------HSFC1(2)                             ------->TEIL                      >>>>>>>>>GT-1       <------ZmHOX2a(1)  <---------TOE2(3)  --------->WRKY12                       ----------->GT1   <---------ANAC46  <---------TOE1(3)  ----------->HVH21                   <----------DOF2    <---------MYB46(3) -----AHL20(2)     <-------GAMYB                    <---------HSFB2a(1)     --------->MYB55(2) --->AHL20(2)     <---------ANAC46                  <---------HSFC1(2)     <---------DEAR3(1) ---->TBP      <----------DOF2                      --------->HSFC1(2)     --------->ALFIN1   ------- >HSFB2a(2)   <---------ANAC58                 >>>>>>>>>TBF1<---------MYB46(3)--------->ALFIN1------- -HSFB2a(2)   <---------ANAC58   --------->At4g35610--------->HSFB2a(1)    <---------AtMYB61  <------   atttagggttttgtttgctttcgttgacatgaatcagcaaaacccagaagaagaagtttctttggttaataatagcggtggtggaggaatcatcgaagct  2498000                                                                                    <-------GAMYB                                                                                   <---------MYB46(3)                                                                                  <------NtERF2                                                                         --------->GLK1(2)                                                                        <---------GLK1(2)                                                                        --------->ARR14(2)                                                                        <---------ARR14(2)                                                                     ============================HOX2a_HOX2a                                                                     ------>ZmHOX2a(2)                                                                    <------ZmHOX2a(2)                                             ==============================HOX2a_HOX2a                                             ===============================HOX2a_HOX2a            <------ZmHOX2a(1)      <---------At4g35610              =============================HOX2a_HOX2a -->ZAT2  <---------ANAC46  <------ZmHOX2a(1)<------ZmHOX2a(1)     <---------ARR14(2)     <------ZmHOX2a(1) -->At4g35610        <------ZmHOX2a(1)--------->At4g35610          --------->ARR14(2)   <---------ANAC46 ---At4g35610  ---------->DOF2     --------->At4g35610       <---------ZAT14    <---------DEAR3(1)   ccagctatagtggaggagaaagaggaagaaggattacagcagaagcaggaagagactattgagtctaccgatccgattctcgtcgtcgttgaggagaaat  2498100                                                                            --------->LBD16                                                                           <---------RAP2.6(2)                                                                          <---------LBD16                                                                    <-----------HVH21             --------->ZAT14       --------->YAB1                  ------>ZmHOX2a(1)             <---------ZAT14      <---------YAB1                  --------->TOE1(2)           --------->At4g35610   <<<<<<<<<<GATA-1                ------>ZmHOX2a(2)                ---      <---------GLK1(1)        ----------->GT1 ----------->GT1 --------->ARR11(3)               <----      --------->GLK1(1)---------->DOF2--------->YAB1        <---------WOX13(1)                  <----   tgttagagaaatcagtagacggagagaaagaagacgataatagtagtagtagtaacatggagattgatcctgtgagtccggctacagttttctgtgttaa  2498200                                                       <---------ARR14(2)                                                       --------->ARR14(2)                                                      <---------MYB52(1)                                                     <---------RAP2.6(3)                                                     --------->LBD16                                                     --------->At5g28300                                                    ----------->GT1                                                    <---------bZIP60(1)                                                    <---------ANAC58                                                    --------->bZIP60(1)      --------->At4g35610                           <---------ANAC55(2)                      --------   <---------At4g35610                              <---------ANAC58                         <-------   --------->At4g35610                              <---------ANAC46                       <--------- ------>TOE1(3)                           ------>ZmHOX2a(1)  <---------TOE1(3)          --------->ARR11(3) -----TOE2(3)                             --------->LBD16   <-----------RAV1(2)         --------->GLK1(2) -----TOE1(3)                       <---------ZAT6  --------->ANAC55(2)                 <---------ARR11(3)   gcttaagcagcccaattccaatttgcttcataagatgagtgttcctgaattgtgccgtaacttcaggtttgactctctctcccatcggaaaatctttaaa  2498300                                                     <---------REM1(1)                                                     <---------ANAC58                                                     <---------bZIP60(2)                                                     <---------ANAC46                                                     <---------ANAC58                                                     --------->ALFIN1                                                   <---------ANAC46                                                  --------->ALFIN1                                                <---------ANAC46                                                <---------ANAC55(1)                                                --------->ANAC55(2)                                                <---------AtLEC2                                                <---------ANAC58                                            <-------GAMYB                                           <---------MYB46(3)                         --------->LBD16                         <----------DOF2   <----------DOF2                       <---------ANAC58                      ---------->ID1       <-----------RAV1(1)                   <---------ANAC58 ->AHL20(2)          <-----------GT1     <---------ZAT18----------->GT1    <---------ANAC58         < --AHL20(2)  ---------->DOF2      <---------ZAT6<---------ANAC58           <---------ANAC58      <--- -DOF2    ------>ZmHOX2a(1)   <----------DOF2<---------MYB52(1)            <---------ANAC46   -------   tttcatcaattcctgtaaagttttctccttttctttgtgttagtgctgttgcgtggtgtggcaaattgaatgctattgcttgtgcttccgagacctgtgc  2498400  Previous    Next  AGI:  At4g04920.1    Description:  similar to hypothetical protein OsI_033047 [Oryza sativa (indica cultivar-group)] (GB:EAY79088.1); similar to putative glycine-rich protein [Oryza sativa (japonica cultivar-group)] (GB:AAM93675.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16919.1) Range:  from: 2497929    to: 2504798    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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