Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->YAB1                              <---------YAB1                            --------->YAB1                         -------->ATHB1                         <--------HAHB4                         --------->YAB1                         <---------ICU4                      --------->WOX13(1)                    <---------ATHB12                                                                -                  --------->WOX13(1)                                        ----------->GT1         <                <------ZmHOX2a(2)                 <------NtERF2            --------->MYB59     <----- >MYB83  <---------YAB1 <---------ATHB12     --------->DAG2         <------ZmHOX2a(2)     --------->ICU4 >MYB46(1)--------->YAB1--------->ICU4      ---------->DOF2        --------->ARR11(3)    --------->At5g28300 --MYB59 <------ZmHOX2a(2) <---------YAB1--------->YAB1<-------TEIL<---------ARR11(3)   ----------->GT1   cttgtactacgatcatagatcaatcaatcattataagaaccattcataaggccgagattcaaattcgaagatcgattttggtaaatttagcagtaattag  2495400                            ------>ZmHOX2a(2)                       <---------TOE1(2)                       <---------TOE2(2)                      ------>ZmHOX2a(1)                      =============HOX2a_HOX2a              <---------ATHB12             --------->ANAC58                                                     <---------GLK1(1)             --------->ANAC58                                                    --------->ARR11(3)     <---------ANAC55(2) <------ZmHOX2a(1)                         ----------->GT1--------->GLK1(1) -------->bZIP60(2)   --------->HSFB2a(2)                  --------->YAB1        <---------ARR11(3) ---------CCA1(2)    --------->TOE1(2)                     ----------->GT1      <------ZmHOX2a(1) ------GT1  --------->WOX13(1)                           ------->TEIL       ---------->DOF2 ---------   ccatatcacataaacaatcaactcctaggatcgcatttcgcattgcaatgtaagaaatgaatcgtaaaatggaaataagaaaggatatcagagagaaaga  2495500                                            ----------->GT1                                         -                                  <---------ARR14(2)         ------>ZmHOX2a(2)                     --                       <------ZmHOX2a(1) --------->MYB52(1) <------ZmHOX2a(2)                      <-                       ===============HOX2a_HOX2a          <---------ARR14(2)                     <--                   <---------ANAC58   --------->LBD16      --------->ARR14(2)                     <--                   <---------ANAC46  <---------LBD16      <---------GLK1(1)                       ---                   <---------ANAC58 <---------LBD16       --------->GLK1(1)                       ---                  <------NtERF2------>ZmHOX2a(2)      <---------ANAC46                            <--           <---------DOF5.7(2)<------ZmHOX2a(2)      <---------LBD16                              ---     --------->MYB52(1)==============HOX2a_HOX2a     <-----------------------TaNAC69(2)   ---------->DOF2 ------->TEIL   <---------DEAR3(1)--------->ARR14(2)--------->MYB52(1)              <--------P  ----- ->DOF2 --------->ANAC46    <---------GLK1(1)      ----------->HVH21   --------->ZAT18----------->GT1   atgaagctatcggcaacgttggcgaggaagagatcggaaccgggaacggagaattgacggagatcggaagaagagcagtaagcgaggttagtaaaagcta  2495600                                                       --------->ANAC58                                                       --------->ANAC46                                                       --------->ANAC58      --------->SPL7                               ------->GAMYB     ------>NtERF2                                --------->MYB46(3)    <---------SPL7                                <---------MYB52(2)    ----------->HVH21                           --------->MYB52(1)  <---------At4g35610                        --------->ANAC55(2)  --------->At4g35610                       ------>ZmHOX2a(2)  <---------LBD16                          <------ZmHOX2a(2) ----->ZmHOX2a(2)                         <---------ARR14(2) ------->CCA1(2)                          --------->ARR14(2) -----ZmHOX2a(2)                        <---------ANAC58       <---------ANAC58 -------ARR11(3)                    <---------ANAC58  <---------MYB55(2) -------ARR14(2)                    <---------ANAC58  --------->MYB46(3) ------>AGP1                   <---------ICU4--------->ANAC46  <---------ANAC46 ------>ARR11(3)             <-----------TGA1<---------ANAC55(2)               <---------TOE2(2) -------AGP1                 <-----------HVH21--------->LBD16  <---------ANAC58<---------TOE1(2) ------>ARR14(2)         --------->YAB1 <---------ANAC58------>NtERF2         <-----------RAV1(2) ------>ARR10    <-----------HVH21 <-----------------------TaNAC69(2)       ------>ZmHOX2a(2) <------   gatctgcggacggagtattggtcacagtcatcgtcatgacttgcgatccgtaacgacccgccatggctggggtttcgatctcaggtttcttcgagtcttt  2495700                                                                                          <---------AHL20(2)                                                                                        <----------DOF2                                                                                       ==============                                                                                      <---------RVE1(1)                                                                                     <---------ARR14(3)                                                                                     --------->ARR11(3)                                                                                     <---------ARR14(2)                                                                                     <---------ARR11(3)                                                                                     --------->AGP1                                                                                     --------->ARR14(2)                           --------->AHL20(1)                                  --------->YAB1                           <---------ARR11(3)                                 <---------YAB1                           --------->ARR11(3)                         --------->TOE2(3)------>ZmHOX2a(2)                           <---------AHL20(1)                         <---------ANAC58<------ZmHOX2a(2)                     --------->YAB1                               <---------ANAC58   --------->ARR14(3)              --------->MYB52(1)                                  <---------ANAC58 ----------->ARR10           --------->TOE1(3)             --------->ANAC58       *TSS  <---------ANAC58===============        <-----------GT1 --------->AHL20(2)                   --------->ATHB12<---------AHL20(2) ----DOF2  --------->TOE2(3)             --------->ANAC58   <---------YAB1   --------->AHL20(2) <----   ttgatttttgtaaccttaacgaataagaaaatatttgagggagaagcaataaacagaagactacgattgcttccttgattttaataagatcttttatttt  2495800                                          --------->SPL7                                         --------->ARR14(2)                                 <---------ICU4                 --------->HSFB2a(2)   --------->LBD16        <---------YAB1           --------->HSFB2a(1)                                <---------AHL20(2)        ------------>CBF        <---------ATHB12                                   <---------AHL20(2)     --------->ICU4            ------>MYB83                                  --------->At5g28300     ------>ZmHOX2a(1)         ------>MYB46(1)                          --------->DAG2 ===========HOX2a_HOX2a      --------->AtMYB61 --------->AtMYB61       ---------->DOF2 ===========HOX2a_HOX2a      <---------MYB59  ------------>CBF --------->AHL20(2)  --------->AHL20(2) -------GT1      <---------HSFB2a(2) <---------LBD16   <---------RAP2.6(3)  ----------->GT1<---------   tcgagtcctgatcaatgttttggaaaccagaccaaacattccggttcgaccaatagccgtctgaattaaaccaaaaagcggtaaattaaatctggtcata  2495900                       <---------MYB52(1)   <---------AHL20(2)                  <---------ARR14(2)     <---------ICU4        <------------------------ANAC81                  --------->ARR14(2)    --------->ICU4        <----------DOF2                  --------->GLK1(2)     <---------YAB1  ---------->ID1     <---------ZAT2   --------->LBD16 --------->YAB1   <------------------------ANAC81     --------->ZAT2 <---------LBD16  <---------ATHB12 <-----------RAV1(1)            <-----------GT1 --HVH21      --------->YAB1 ----------->RAV1(1) <---------AHL20(2)     <---------AHL20(2)   ccctctcggctcggtattagaatccggtttgcaacacaaatcataattcattttttttgttgttcttttcttatttttttttttttttttcagtctaaat  2496000                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                        <---------AHL20(2)                  <---------YAB1                                                     --------->AHL20(2)                --------->YAB1                                                       <---------AHL20(2)           --------->ZAT18         --------->AtLEC2                            ------->GAMYB      <---------ANAC58        --------->ANAC58                                --------->MYB46(3)      <---------ANAC58        --------->ANAC58     ------>ZmHOX2a(1)        <-----------GT1        --   tttagaatacttgctcactgattattttgagcaagtcatgcatgagacacatcctcacaattcaatttgagttcggattaaccacatttatttatttttc  2496100                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)                                                                      <---------ARR14(2)                                                                      <---------AGP1                                                                      --------->AGP1                                 <---------ANAC55(2)                  --------->ARR14(3)       <-----                                 <---------ANAC46                     --------->ARR14(2)     <-------                               --------->YAB1                         <---------ARR11(3)     --------                              <---------ATHB12                        --------->ARR11(3)     --------                              <---------ATHB51            ---------->DOF2       <-----------HVH21                            --------->WOX13(1)   <---------WRKY38(1)  <---------ARR14(3)    <--------                        --------->YAB1           <---------WRKY12 ---------->DOF2           <-------- ------->MYB46(3)  <---------ATHB12             --------->WRKY18(1)  --------->RVE1(1)      ---------   aacaaatagttcaaaacttcaatcgatgatcaattatgtgaaactagaaggtcaacacataaaagctcaaaagatcttggactgtcacagagcaatgata  2496200   <---------MYB46(3)  <---------WOX13(1)                                                                --------->MYB46(3) ----WOX13(1)                                                          <---------RVE1(1) -ATHB1                  --------->ANAC46                <-----------HVH21  <---------AHL20(2) ->ATHB12           <---------KAN4(2)                   --------->TOE2(3)  --------->AHL20(2) ->YAB1          ----------->GT1                        --------->TOE1(3)  <---------AHL20(2) -YAB1       --------->ATHB12           --------->At4g35610           <---------ARR11(3)       ------ -ATHB12    <---------YAB1              <---------At4g35610           --------->ARR11(3)       ------ >ICU4      <---------ATHB12   --------->YAB1----------->GT1        ----------->ARR10     --------->At4g35610   gatgatggatgctaatgaatggaataaacacaatgagaaggaagatgaggcaaaacaaccttcacatagggagatttttaaattgaacaactagctcaag  2496300  Previous    Next  AGI:  At4g04910.1    Description:  NSF (N-ETHYLMALEIMIDE SENSITIVE FACTOR); ATP binding / binding / nucleoside-triphosphatase/ nucleotide binding. Identical to Vesicle-fusing ATPase (NSF) [Arabidopsis Thaliana] (GB:Q9M0Y8;GB:Q9ZPH6); similar to CDC48 (CELL DIVISION CYCLE 48), ATPase [Arabidopsis thaliana] (TAIR:AT3G09840.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70797.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39274.1); similar to N-ethylmaleimide sensitive fusion protein [Nicotiana tabacum] (GB:BAA13101.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Cell division protein 48, CDC48, Range:  from: 2489415    to: 2495764    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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