Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                      <---------GLK1(2)                                                                                   --------->At4g35610                                                                                   <---------At4g35610                                                                                <---------At4g35610                                                                                <---------ZAT2                                                                               --------->ANAC46                                                                              <---------HSFB2a(2)                                                                         <---------ICU4                                                                         <--------ATHB1                                                                         --------->ATHB12                             --------->ANAC58                            -------->HAHB4                             --------->ANAC58                           <---------ATHB12                         <---------ALFIN1                               <---------YAB1        <----------DOF2<-----------HVH21                              ------>MYB83 <---------HSFC1(2) -----ARR11(3)       <-------TEIL                                     ------>MYB46(1)          ------ -->ANAC58    <------ZmHOX2a(2)                           --------->YAB1--------->ICU4  <----------DOF2 -->ANAC58   --------->ARR11(3)                    --------->ANAC46 <---------MYB59--------->HSFC1(2)   aattctcaggctttagatcacgatgcatcacacccatgtaatggcaattcttcacaacattcacaatcgacctaatgattccagcagcttctttctccga  2387600                                          --------->ZAT6                                   <---------ANAC46                              ------>ZmHOX2a(2)                             <------ZmHOX2a(2)                            --------->ARR11(3)                            <-----------ARR10                                                   -----                            <---------ARR11(3)                                                  -----                            --------->ARR14(2)    --------->DEAR3(1)                        ---------                            <---------ARR14(3)    --------->AtMYB61                         ---------                            <---------ARR14(2)    <---------ALFIN1                          ---------                            --------->ARR14(3) <---------ALFIN1                            ------>ZmHOX2a(1)                           <------ZmHOX2a(1)   --------->ANAC46   --------->YAB1        ---------->ID1                       --------->TOE1(2)<-----------GT1   <---------KAN4(1)      --------->GLK1(2)                   ---------->DOF2 <---------ANAC58  --------->AtMYB61           <---------ARR11(3)              --------->TOE1(1)    <---------ANAC58----------->RAV1(1)           <-----------ARR10 --->LBD16    --------->TOE2(1)   ---------->ID1 --------->MYB46(3)             <---------GLK1(2)   gtaagacttcccaacatcgtacaaagctaggatcttgtcgtataactctccaccaccacaatattccataacaatatgtacagaatctttgtcctcgtaa  2387700                                                                --------->ANAC55(2)                                                                --------->ANAC46                                                                --------->TGA1a                                                   --------->GLK1(2)                                                   <---------ARR14(2)                                                   <---------ARR11(1)                                                   --------->ARR14(2)                                                   <-----------ARR10                                                   ------->TEIL <---------O2                      <--                                                  <---------ARR14(1)                         <------- ---->ANAC58                                      <---------GLK1(2)                     <---------MYB52(1) ---->ANAC58         <------MYB46(1)              <---------CCA1(2)                    ------>ZmHOX2a(1) >TOE2(1)            <------MYB83        --------->YAB1         --------->O2           <----------DOF2 >ANAC46            --------->MYB59   <---------ANAC58          ==================================bZIP_DOF >TOE1(1)        --------->ATHB12     <---------ANAC58       <---------REM1(2)      ---------->ID1<--   gcattcttgaactcgacaatgtttggttctccagacaattgcttcataatccgaatctctctcttcacgtcttcttcacattcttcgtcctttagctttg  2387800                                                     <---------ANAC58                             <--                                                     <---------ANAC58                           -----                                                     <---------ANAC46                          ------                                                  <----------DOF2                          --------->LBD16                                                ------->TEIL                              --------->LBD16                             <---------ANAC46 ------->GAMYB                              --------->HSFB2a(2)                            -------->P        <---------ZAT18                     --------->ARR14(2)                         <---------ANAC58    --------->ANAC58                 <---------MYB59  <----- -------ANAC58           <---------ANAC58    --------->ANAC46                --------->ANAC46 <------ZmHOX2a(1) ---DOF2               <---------ARR11(3)    --------->ANAC58           --------->ZAT6   <---------HSFB2a(2) -------ANAC58<-----------RAV1(2)    <---------GLK1(1)   <--------P  <-----------GT1  ------>ZmHOX2a(1)   tcttgagaatggttttgcaggcgaatgtcttacctgtagatttctcaacgcactttcgggttagaccgaaattacctctacccaattcctccccgaggat  2387900           <---------bZIP60(1)                                                      <----------DOF2           --------->bZIP60(1)                                             --------->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR3932A/B                                       --------->ANAC58 <---------ARR11(3)                                               --------->At4g35610 --------->ARR11(3)  <---------TOE2(3)                            <---------At4g35610 -------AHL20(2)   ---------->DOF2                           ------>ZmHOX2a(1)  <---------CCA1(2) ---->CCA1(2)      --------->MYB52(1)               <---------REM1(1)  --------->ANAC58 --->ARR14(2)    <---------MYB52(2)              <---------MYB46(3)    --------->ANAC58           --- ----ARR14(2)   --------->At4g35610      <----------DOF2<---------At4g35610-------->P             ---   ataaatctttgtgatgtcaactaaaggtttctcaagaatggttcttttcgattgttgtagctccttactgctgaagcaacccatctctttgagaataaaa  2388000            <---------ARR11(3)                                   <---------AHL20(2)            --------->ARR11(3)                            ----------->GT1      --------->ALFIN1                                 <---------GLK1(2)  ---------->DOF2                                      <---------ARR14(2)                  <--------- ------>TOE1(3)                         <----------DOF2--------->ARR14(2)       <-------------------- ------>TOE2(3)                <----------DOF2     <---------At4g35610  <----------DOF2  <---------AHL20(2)   ccttaaaagtgtgagatttttggaaatgggtctctttaatctcttttggctgaagcagatttgttatataatctctttagttcgaatttgttttattgtt  2388100                            <---------ARR11(3)                                                     --                            <---------GLK1(2)                                                     <--   --------->ANAC46       <---------TOE1(3)                                                       ---   --------->ANAC58<---------AHL20(2)                                                            <---   --------->ANAC58--------->AHL20(2)                                                            <---   --------->AtLEC2<---------AHL20(1)  --------->AHL20(2)              <------------CBF         <----  --------->LBD16 --------->AHL20(2)   <---------AHL20(2)           --------->AHL20(2)    --------->ARR11(3) <---------HSFB2a(2)      <---------TOE2(3)                     <-----------TBP     --------->HSFB2a(2) --------->HSFB2a(2)   --------->AHL20(2)   <------------CBF    --------->AHL20(2)  <---------HSFB2a(2) ---CBF         --------->YAB1       <----------DOF2          <----------DOF2       ------>ZmHOX2a(1) ----ANAC81------------>CBF --------->ARR11(3)    <------------CBF  <---------AHL20(2)    <---------ARR11(3)   cttccaggcaagtggcaatattaaatttaagattttggtctttaaatattgaaattggtcatttctttatataaattgacttagtcctcgaagacatttt  2388200                                        <---------ARR14(2)                                        --------->KAN4(2)                                       <----------TaMYB80                                       --------->KAN4(1)                                       <---------KAN4(1)                                       <---------HSFB2a(1)                                       --------->HSFB2a(1)       <--------P                     <---------ARR14(2)                 --------->GLK1(2)  <------------CBF                    --------->ARR14(2)                 --------->ARR14(2) ---------->CBF                       <---------KAN4(2)            <---------ARR14(2) -------------AGL15      <---------WRKY18(1)            --------->MYB52(1)                --------->ATHB12 ------>ANAC46          --------->WRKY38(1)          --------->YAB1--------->ARR14(2)     --------->AHL20(2) --------------AGL1     ----------->HVH21       ----------->GT1 <---------MYB59           --------->ATHB51 --------------AG       --------->WRKY12--------->ARR14(2)    ------->TEIL                <---------AHL20(2) -------GT1   <---------AHL20(2)      ---------->TaMYB80<-----------GT1  <---------ARR14(2)   acacaattggtagtttttaataggccttgaccttgaaccgaatattcgaaccgaaaaataactgaaccgaattcgaatccgaatttttagaattatttga  2388300                                                --------->GLK1(2)<---------ARR14(2)                                                ------->TEIL    <---------GLK1(1)                                    ------>MYB83<---------ARR11(1)                          <---------ARR11(3)    --------->ARR14(2)        --------->AHL20(2)       --                 <---------YAB1   <---------MYB59               --------->GLK1(1)              ------              <---------YAB1      --------->AtMYB61        ------->MYC3   <---------AHL20(2)   <-----           --------->ICU4 --------->GLK1(2)     <---------ARR14(2)        <---------YAB1   <---------AHL20(1)          <---------MYB59--------->RVE1(1)     <---------ARR14(1)--------->ARR14(2)        --------->AHL20(1) --------->ARR11(3) ------>ZmHOX2a(1)     --------->MYB52(1)--------->ALFIN1        --------->TOE2(3) <---------ARR11(3)--------->TOE2(3)------>MYB46(1)        <-------MYC3 --------->YAB1     --------->ARR11(3)   ataggtcttagaccttattatcctaaaaaatctgaaccaaacccaaaccgaatctaatacatgtgggtatccaaatataaatgtaaacttaaaaatattg  2388400                                                                       <---------ATHB51                                                                     --------->YAB1                                                                    <---------AHL20(2)                                                                   <---------AHL20(2)                   <----------DOF2                                 --------->AHL20(2)              --------->YAB1                                    <---------AHL20(2)                <--             <---------YAB1                                   <---------RVE1(1)                   <--           --------->YAB1                             <---------AHL20(2)                          <--          <---------YAB1                              --------->AHL20(1)                    <--------       <---------AHL20(2)                --------->YAB1      --------->ARR11(3)             ---------     <---------AHL20(2)              <---------YAB1   --------->AHL20(2)          <---------AHL20(2)    --------->AHL20(1)   --------->CCA1(1)            <---------AHL20(1)<--------ATHB1     --------->AHL20(2)    <---------AHL20(1)   --------->RVE1(1) <---------YAB1    <---------ARR11(3)  --------->AHL20(1)   <---------AHL20(2)--------->AHL20(2)  --------->AHL20(2)  <---------GLK1(2)   <---------AHL20(1) ------->AHL20(2)  --------->TOE2(3)<---------AHL20(2)--------->ARR11(3)<---------ICU4     <---------AHL20(2) --->ICU4<---------AHL20(2)         --------->AHL20(2)<---------ARR11(3)-------->HAHB4    <---------WOX13(1) ----YAB1--------->AHL20(2)        --------->AHL20(2)--------->AHL20(2)--------->ICU4  <---------YAB1   attatatatatttttataatactttaaatatccaaaattaaaattataaatccaaatatattagatttttttaataattcatatatattttgatttattt  2388500  Previous    Next  AGI:  At4g04700.1    Description:  CPK27 (calcium-dependent protein kinase 27); kinase. similar to CPK31 (calcium-dependent protein kinase 31), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04695.1); similar to CPK21 (calcium-dependent protein kinase 21), calmodulin-dependent protein kinase/ kinase [Arabidopsis thaliana] (TAIR:AT4G04720.1); similar to calcium-dependent protein kinase [Solanum lycopersicum] (GB:CAC87494.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro Range:  from: 2385274    to: 2387984    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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