Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->ANAC58                                       --------->ANAC58                                   <---------ALFIN1                                           <------                                --------->YAB1                                     --------->ATHB12                  <----------DOF2<-----------HVH21                                 <---------ICU4      <---------ARR11(3)   --------->ANAC46                                       <---------YAB1    --------->ANAC58    <------ZmHOX2a(2)                                         <---------ATHB12    --------->ANAC58   --------->ARR11(3)        --------->YAB1     --------->YAB1--------->ICU4  <--   gagagcaagaaattctcaggctttagatcacgaagcatcacacccatgtaatgacaattcttgacaacattcacaatcggcctaatgatttcaacagctt  2383600                                                               --------->AtMYB61                                                             ----------->RAV1(1)                                      <---------ARR11(3)    --------->AtMYB61                                      --------->ARR11(3)    <---------ALFIN1                 <-----------------AGL1                     --------->DEAR3(1)  <---------LBD16<-----------------AGL2  <----------DOF2   --------->MYB46(3)  <---------HSFB2a(2)           <---------HSFC1(2)       <---------ALFIN1  --------->HSFB2a(2)           --------->HSFC1(2)  --------->ZAT6 ---GLK1(2)      ----------------->AGL1 ------>ZmHOX2a(2)--------->ANAC46   --------->YAB1 --------->GLK1(2) --------DOF2 <----------DOF2---------->DOF2      <-----------GT1   <---------KAN4(1)     <---------GLK1(2)   ctttctcggagtaagactttccatctttggacaaagcttcgatctttttgaataactctccaccaccacaatattccataacaatatgtacagaatctct  2383700            <---------ANAC58                                 ------->TEIL            <---------ANAC58                                 --------->GLK1(2)         <----------DOF2                                    <---------GLK1(2)       <---------At4g35610                                --------->ANAC58       --------->At4g35610       --------->ARR14(2)       <---------ANAC55(2)  --------->TOE1(1)              <---------ARR14(2)       --------->ANAC55(2)  --------->ANAC46             <------MYB83               --------->ANAC58--------->ANAC46  --------->TOE2(1)            <------MYB46(1)          --------->CCA1(2)<---------LBD16 ------>ZmHOX2a(1)            --------->MYB59        <---------YAB1    <---------REM1(2)         <---   gtcctcgtaagctttcttgaactcaacaatgttcggttctccagacaaatgcttcatgatacgaatctctctcttcacggcttcttcatcttctctactc  2383800                                                                                    --------->WRKY12                                                                                    ----------->HVH21                                                                                    --------->WRKY38(1)                                       ----------->RAV1(2)                  <---------ARR14(2)                            <---------ANAC58                          <-----------GT1<---------WRKY18(1)    <-------TEIL            <---------ANAC58           --------->ANAC58     --------->ARR14(2)  <---------GLK1(2)     <-----------RAV1(2)            --------->ANAC58  <---------MYB59            - -------DOF2      --------->ARR11(3)  -------->P       --------->ANAC46 --------->ANAC46<---------MYB59   tttagattcgtcttgagaatggtcttgcaggcgtaagtcttacctgaagtcttctcaacgcattttcgagttataccgaattggccttgacccaattcat  2383900                                                                 <---------TOE1(3)                                                                 <---------TOE2(3)                                                                 --------->MYB59     -------->P              <----------DOF2                             <---------WOX13(1)         --------->ANAC58             <---------DAG2                              >>>>>>>>>ARR2        <---------REM1(1)    <------ZmHOX2a(1)      --------->MYB46(3)           --------->ATHB12    --------->At4g35610 --------->LBD16        <---------WRKY12               <---------YAB1       <---------At4g35610 -------->LBD16       <-----------HVH21            <----------DOF2   <-------TEIL    --------->ANAC58   ccccgaggatgtaaacctttccgatgtcaacgaatggtttctcaagaatggttctttttgattgttttaggttcttactgctgtagcaacccattgagag  2384000                                                                               <----------DOF2                                                ----------->GT1             <---------TOE2(3)     ---                                              <---------GLK1(2)     <---------At4g35610         -----                                      <------ZmHOX2a(1)           <---------HSFB2a(2)         <------                                   --------->HSFB2a(2)         <---------GLK1(1)           --------->YAB1                   ---------->DOF2 <---------HSFB2a(2)        <---------ARR11(3)           <---------ICU4        <----------DOF2       ------->TEIL    <------------CBF--------->ARR11(3)         --------->GLK1(2)   ttttcagagacttttctggtttaaagaagatgaacttcgaggaagtcagattgtcaaaatgtaagatttcagaagatggaggtttatggagaatcatcat  2384100                                                          <---------AHL20(2)                                      ------------>CBF    --------->AHL20(2)                            <------MYB83              --------->AHL20(2)        --------->ANAC58                            <------MYB46(1)          <---------AHL20(2)         --------->ANAC58  ---      --------->ZAT14      --------->MYB59           --------->AHL20(1)       ---------->DOF2     <-- --------->CBF          --------->ARR14(2)           <---------AHL20(1)  <------MYB46(1)          --- ---->At4g35610         <---------ARR14(2)        --------->AHL20(2)     <------MYB83             <-- ---ICU4      <---------TOE1(2) <----------DOF2<----------DOF2           ----------->GT1   <---------   ctcaattctgaactcgtacatttgtggatttggtctttaagtcaatgttctttaaaatatttaaattcacatagttggtcaaaagcaaacactctggtgc  2384200                                                                                  --------->GLK1(1)                        <----------DOF2                                          <---------MYB52(1)                    <------MYB46(1)                                             <-------GAMYB               <--------ATHB1                                               <---------MYB52(1)               --------->ATHB12                                            xxxxxxxxxxxxxxxx>smallRNA(s)              --------->ICU4                                               <---------SPL7 ------>At4g35610   <------MYB83                               <---------YAB1  <------MYB46(1) -------At4g35610  --------->MYB59                            <-----------GT1  <------MYB83 ------>ZAT2  <---------ATHB12         <----------DOF2 <-------TEIL       <---------ANAC58         <- -------ZAT2  <---------YAB1   <---------WRKY12   <---------AHL20(2)      <---------ANAC58   <------- --RAV1(1)------------>CBF    ------------>CBF    --------->AHL20(2)  ------>ZmHOX2a(1)     <-------GAMYB   agctagagggtttacaatgatttggtctttaagtcaatggtctttagaatatttaaattcatattatcagtcctaggcgttcggttatccattcggttat  2384300                                                <------MYB46(1)                                       <---------YAB1                                 <---------MYB52(1)     --------->ARR14(2)                     <-----    <-----------GT1             <-------GAMYB   <------MYB83                                  <------ --------MYB52(1)              ----------->GT1 --------->MYB59   <----------DOF2             -------- --MYB52(1)            --------->GLK1(2) ---------->DOF2<---------ARR14(2)           <-----------GT1   cgtttttttcggttctaaagtttagaatccattcggttattttgaaagttaggtttcggtttcggttcttttgctcttaaaaaatagtatccattcggtt  2384400                                                                                      <---------AHL20(2)                                                                                 <---------AHL20(2)                                                                                --------->AHL20(2)    <----------DOF2                          <------ZmHOX2a(1)            <-----------GT1 <-----------GT1                            ----------->GT1          --------->ARR11(3)  <---------GLK1(2) ----MYB52(1)               <---------MYB52(1)                       <---------ARR11(3)--------->AHL20(1) -GAMYB         --------->ETT(1)   <---------ANAC46                  <---------AHL20(1)--------->ARR11(3) --->GT1        <---------ANAC46  <---------LBD16 <---------YAB1     --------->AHL20(1)<---------ARR11(3)   attttactttgaatattgtcggataattcagttattttcggataataggataatttttggttattttcgaatatttttactattttatatatattctcaa  2384500  Previous    Next  AGI:  At4g04695.1    Description:  CPK31 (calcium-dependent protein kinase 31); calmodulin-dependent protein kinase/ kinase. similar to CPK27 (calcium-dependent protein kinase 27), kinase [Arabidopsis thaliana] (TAIR:AT4G04700.1); similar to calcium-dependent protein kinase [Solanum lycopersicum] (GB:CAC87494.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048); contains InterPro dom Range:  from: 2381632    to: 2383994    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version