Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->YAB1                                     <---------YAB1                                  <------ZmHOX2a(2)                                 <---------ARR11(3)                                 --------->ARR11(3)                <------ZmHOX2a(2)                                --------->YAB1                    --------->ARR11(3)               <-                  <---------GLK1(1)--------->YAB1                 <---------ARR11(3)----------->GT1--        --------->YAB1       ---------->DOF2  --------->ZAT6  ---------->DOF2  ---------->DOF2    ---       <---------ATHB12<----------DOF2<---------ICU4  ---------->DOF2       >>>>>>>>>MYB2    <-------   atcaggctaatcaaaacttgagttcctttaacaaagatcataatcgtaacacaatccaaagcccaaaagatcgaagaaaaccaaagaagtaaacaactat  2329800                            --------->AtLEC2                            --------->ANAC58                            --------->ANAC58                           --------->WOX13(1)                ---------->DOF2                          ---------->DOF2              ----------->GT1            -------->P                         <---------ATHB12             ------------------------>ANAC81 --------->LBD16 ---------DOF2         --------->WOX13(1)             --------->DAG2             --------->MYB52(1) ---->ZmHOX2a(1)   <---------bZIP60(1)               ---------->DOF2     --------->ANAC58       ----- ------>TOE2(3)    --------->bZIP60(1)          ----------->GT1          --------->ANAC58 <------ZmHOX2a(1) --MYB52(2)     ----------->HVH21              ------------------------>ANAC81 <---------MYB52(2)   cctttaaacgcttatcgagtgacatcaatcaagcaaaaaccctacagaaattgcaaaaagtaaaaaagaagaaacaaggaaactaacccagaggattaga  2329900                         --------->ARR11(1)                       --------->ICU4                       <---------YAB1                     --------->YAB1   --------->TOE1(2)                     <---------ICU4 --------->ARR14(2)          --------->ARR11(3)   <--------P                                                  ----------          <---------ARR11(3)   <---------MYB52(1)                                          --------->LBD16         --------->GLK1(1)    <-------GAMYB  --------->ATHB12                 <---------MYB52(1)         <---------GLK1(1)--------->ARR14(1)<---------YAB1            <---------DAG2      -----------       <------ZmHOX2a(1)--------->ATHB12    --------->ICU4            <----------DOF2    <---------LBD16 ----->DOF2         --------->ICU4  <---------ARR14(2)          --------->ANAC46--------->MYB59   aagcttgaaggagttcttctccatgatgattcggttagtatctacgatgattaagagaaacaaaactcgaaactttatctgttaggctaaatcgggaaaa  2330000                                                              --------->ANAC46                                                              --------->ANAC58                                                              --------->ANAC58            <------ZmHOX2a(1)                                                         ---------->DOF2                 ----------->GT1                                                     --------->ANAC58                  --------->At4g35610    --------->ANAC46                                 --------->ANAC58            --------->ICU4 ->GT1                         --------->ALFIN1     ------->TEIL                 <---------YAB1 >GT1  --------->TOE2(3)   ---------->DOF2      --------------->AtSPL3         --------->YAB1   -----   aaacccaaaccacaaaaactcgaaattgacaaagtggagaggcgaaatcaaacgtacccaaaagacgaaactagggttcgatgatgatcagaggaaaaaa  2330100                                                        --------->AHL20(2)                                                       --------->ARR11(3)                         <--             <---------HSFB2a(2)           ---------->DOF2     <---------TOE2(3)                  *TSS         >>>>>>>>>ARR2                ----------->GT1  <---------AHL20(1)                        <---        --------->ATHB12     <------ZmHOX2a(2)         <---------ARR11(3)                       -----       <---------YAB1       ------------------------>ANAC81  ---------->DOF2          <---------TOE1(3)   ------->TEIL            <------ZmHOX2a(1)--------->DAG2  <---------AHL20(2)        <---------TOE2(3) ---->AHL20(2)     >>>>>>>>>TBF1  --------->AHL20(2) --------->GLK1(2)      <------ZmHOX2a(1)  ------   aaatgaattttgattgtagaagaagaagaggatcaaaaaaatgaaaaaaggagagaatatatataaaggaaacagagaggatggatttagggtttagtga  2330200                                                                 <------NtERF2                                                                 --------->At4g35610                                                               <---------WRKY12                                                              --------->TGA2(2)              --------->ANAC58                               <-----------HVH21              --------->ANAC58                               <-----------TGA1             ------>NtERF2                                  <---------TGA1a         --------->ANAC58                                   --------->TGA1a         --------->ANAC58                                   ===============================MYC_MYB         --------->ANAC46                                   --------->O2       <---------AtLEC2                                     --------->ANAC46       <---------ALFIN1                                     --------->ANAC58   <---------ANAC58                                         <---------bZIP60(1)         <------------CBF   <---------ANAC58                                         --------->ANAC58         <---------TOE1(2)   --------->At4g35610              <---------AHL20(2)      --------->bZIP60(1)     <---------MYB52(1)   ----------->RAV1(2)              --------->AHL20(2)      <---------TGA2(1)      <-------GAMYB   <---------ANAC46        <---------ANAC58                 <---------ANAC55(2)--------->O2 <-----------GT1           <---------ANAC46        <---------ANAC58            <---------O2 -------MYB46(3)      <---------ICU4<---------YAB1 <---------ANAC58         ----------->HVH21  <----- ------WOX13(1)--------->MYB46(3)  --------->AHL20(2)       --------->ANAC55(2)--------->bZIP60(1) ------------------>TaNAC69(2)     <---------AHL20(2)<---------CCA1(2)    --------->CCA1(2)<---------ZAT14 --->ATHB12<---------ZAT18 <---------ANAC58 <-----------GT1 --------->TGA2(1)  <---------bZIP60(1)   ttgttacctgcacggcacccaaacttattacttggattttaattagttacgatgcttatcttacgtcagcgagatgatacgacgtcgttggattgtagtg  2330300                                                     <----------DOF2                                         <---------GLK1(1)                               --------->ZAT18                                        --------->ARR14(2)                              <------NtERF2                  <---------AHL20(2)    <---------AGP1                                <---------ANAC58                  --------->ATHB12      --------->ARR11(3)                            <---------ANAC46          --------->ZAT18               <---------ARR14(2)               <---------ICU4 --------->ALFIN1 --------->ICU4  --------->AHL20(2)    <---------CCA1(2)           --------->ANAC55(2)<---------ANAC58 ----ZAT6 <---------ZAT18  <----------DOF2------>ZmHOX2a(2)<-----------HVH21<------ZmHOX2a(1)     <--   gtcatgagtttgtgaactatttattgggcctttataggtttggatctcgtttgggcttttctgtcatttacatgatcaggactactaggcgtggacaaat  2330400            <-----------GT1           --------->KAN4(2)           <---------ARR14(2)                                        --------->ARR11(3)          <---------KAN4(1)                             --------------->AGL15          <----------TaMYB80                           ----------------->AGL3         ---------->TaMYB80  --------->ANAC58    --------->ANAC58    <---------ARR11(3)   -------->P                --------->ANAC58    --------->ANAC58    <---------AHL20(1)   ------>MYB83<---------MYB59                 ---------->DOF2       --------->AHL20(1)   ------>MYB46(1)         ---------->DOF2<---------AHL20(2)    ----------->GT1 --------->AtMYB61  --------->YAB1       --------->AHL20(2)    ----------->GT1 ---------GT1 --------->ANAC46           <---------AHL20(2) --------->DAG2     ----------->GT1      -   aaaccaactcgaatataccgaatcaaaatcaaagcaaaactaattaaatcaaagcaaaccaaaaattggaaaatattcgaatggatactaaattctataa  2330500                                                                                <---------ARR11(3)                                                                                --------->ARR11(3)                                                                      --------->ATHB12                                                                      --------->ATHB51                                                                      <---------ICU4                                                                      -------->HAHB4                                                                      <--------ATHB1                                              <---------YAB1         --------->ICU4                                            --------->AHL20(2)       <---------AHL20(2)                                            <---------AHL20(2)       --------->AHL20(2)                                        --------->AHL20(2)           <---------ATHB51                                       <---------YAB1                <---------YAB1                                       <---------AHL20(2)      --------->AHL20(2)      <---------AHL20(2)                                     <---------ICU4         <---------ICU4  ---------->DOF2----------         ---------->DOF2            --------->ICU4  --------->ZAT6 --------->YAB1     --------->AHL20(2) --------->DOF2            ----------->GT1 <---------AHL20(2)  <---------AHL20(2)--------->CCA1(2)   atgaaagaaccgaaagaaccaaaactaaatggatactaaatattatttatttttagactacataattaaaaataattgaaaagatatataaaatagtaaa  2330600                                                                                    --------->YAB1                                                                            --------->ANAC58                    <---------ARR11(3)                              --------->ARR11(3)                    --------->ARR11(3)                              --------->AHL20(1)             <-                    <---------AHL20(1)                              <---------AHL20(1)             <-                    --------->AHL20(1)   --------->CCA1(1)          <---------ARR11(3)             --               ------->GAMYB             --------->RVE1(1) --------->CCA1(1)--------->ANAC58      ---            --------->MYB52(1)     ------>ZmHOX2a(2)  ------->GAMYB--------->YAB1 --------->AHL20(2) ->GT1 --------->AHL20(2)    --------->YAB1        --------->MYB52(1)     ---------->DOF2   ---------   aatactcgaaaaaataaccgaaaatattcaaaaatgatcgaaaatatccaaaataaccgaaatatccaaaaatattcaaagcaaaataatagaatggata  2330700  Previous    Next  AGI:  At4g04620.1    Description:  ATG8B (AUTOPHAGY 8B); microtubule binding. Identical to Autophagy-related protein 8b precursor (ATG8B) [Arabidopsis Thaliana] (GB:Q9XEB5); similar to APG8A (autophagy 8A) [Arabidopsis thaliana] (TAIR:AT4G21980.2); similar to APG8A (autophagy 8A) [Arabidopsis thaliana] (TAIR:AT4G21980.1); similar to microtubule-associated protein 1 light chain 3 [Gossypium hirsutum] (GB:AAQ76706.1); similar to Os08g0191600 [Oryza sativa (japonica cultivar-group)] (GB:NP_001061171.1); contains InterPro domain Light chain 3 (LC3) (InterPro:IPR004241) Range:  from: 2328494    to: 2330198    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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