Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ARR11(3)                                                                         --------->ARR14(2)                                                                         <---------ARR14(2)             --------->ATHB12                                           <------ZmHOX2a(1)           <---------WOX13(1)                                 <---------TOE1(2)         --------->ATHB12                                     <---------TOE2(2)         <---------MYB46(3)          =============================HOX2a_HOX2a       <------MYB83        <---------YAB1               <------ZmHOX2a(1)     ------>ZmHOX2a(2)        <------MYB46(1) ----------DOF2             ---------->DOF2         <---------AtMYB61 <---------TOE2(3) ---------DAG2 <---------WOX13(1) --------->At4g35610      ====================HOX2a_HOX2a   tgcttttttggtgattgattgtttcacatagaaagcagaggacaattgtgagttttggtgatcgtatgttttgaggaacttgaagttggttttgagttat  2309200                                                                                       <----------DOF2                                                        --------->ATHB12              <---------ANAC58                                                       <---------YAB1              <---------WOX13(1)                                             --------->ANAC58                    --------->ATHB12  --                         ---------->DOF2     --------->ANAC46                    <---------ICU4    --                   <---------ANAC46      --------->ANAC58                       <---------YAB1     <-               ------->MYC3              --------->ANAC58                ---------->DOF2 <---------AtMYB61               <-------MYC3 --------->ICU4   --------->ANAC58    <---------ZAT6 --------->ICU4    <--    ----------->RAV1(1) XXXXXXXXXXXXXXXXXXXX>MIR400   <-----------HVH21--------->YAB1 <---------ANAC58   atatagcaacatggacacatggtgtatgaaagtattacatggcaagcaagacacattgtcattggtagagtaatcaaaagacatgattgctttggtttcc  2309300                                                      ----------->GT1                                                      <------MYB46(1)                                   --------->ZAT6     <------MYB83        <---------At4g35610 --------->ZAT14        <---------ARR14(2)        --------->At4g35610 <---------ZAT14        --------->ARR14(2)               <---------YAB1        --------->ZAT2    --------------->AtSPL8  =================================HOX2a_HOX2a ------->AHL20(2)       <-----------GT1           <------ZmHOX2a(1)             <---------GLK1(2) ------->AHL20(1)  --------->ANAC55(2)            --------->ATHB12           --------->YAB1 --------ARR11(3)  <---------ANAC55(2)   --------->YAB1    --------->ZAT6   <------ZmHOX2a(2)  <----- -------CCA1(2)   <-------TEIL     --------->YAB1<---------YAB1       <---------ANAC46         ------   atatattaagagctgagagttacatatcacagtactatcactatcaacatgaggattggtaactctagagctacttggatcatattctgctagaccagat  2309400                                               ------>MYB46(1)                                             --------->AtMYB61                                          ------->GAMYB                                          <---------ALFIN1                                         <---------MYB111(2)                                         --------->MYB46(3)                                         <---------MYB55(2)                                        -------->P                                        ------>MYB46(1)                                        ------>MYB83                                         --------            <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)------>MYB83                                ------>ZmHOX2a(1)        --------->YAB1                <---------MYB111(2)                                  --------->LBD16   <-------TEIL                <---------At4g35610                                   --------->MYB52(2) ----ARR14(2)        <-----------GT1------>ZmHOX2a(1)                                <---------MYB46(3) --->ARR14(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             <---------ANAC46   ttagattcagtcacaataacgtcttaccacttaagctcctccaaccaccttccttctcatgtataccttcgtgattcttcaagttgtttgttcctgaaat  2309500      <----------DOF2     --------->TOE2(3)---------->DOF2     <---------------AGL15     --------------->AGL15     <---------DAG2--------->AtLEC2                <-----------GT1    <-----------------AGL3                 ----------->GT1                                       ----    ----------------->AGL3 ---------->DOF2--------->DAG2                ------------>CBF     <------ZmHOX2a(1) -->DOF2      <------ZmHOX2a(1)          ---------->DOF2       --------->YAB1          <---------ZAT6   cgcataaccttttttaggacaatgcaaagaaaaggaatgagggaaaagtgatattactagttctctcatagttatccaatctaatagaagtgataggaat  2309600                                                                      --------->ANAC46                                                                 <----------DOF2                             <---------ARR14(2)                 <---------ANAC58                             --------->ARR14(2)                 <---------ANAC58                     ------>ZmHOX2a(1)                     <------------CBF                     -----                <---------ZAT2                            --------->ATHB51                     <-----                <---------At4g35610                       --------->ATHB12                  ---------                --------->At4g35610                       -------->ATHB1                --------->AHL20(2)          <----------DOF2    <---------MYB52(1)          <---------YAB1           --------->ANAC55(2) ----->YAB1     --------->ZAT2      <----------DOF2   <-----------------AGL3      <---------ANAC55(2)   aagaaaacaaaactttgcagctcctataccagttatgcctttgtttcaaggcctccactattattggctttcactgcataaaacaggtaatcaaatataa  2309700                                                                                 ------>ZmHOX2a(2)                                                                                ===============HOX2a_HOX2a                                                                                <------ZmHOX2a(2)                                                                                --------->ARR14(1)                                                                               <---------ARR14(2)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                               <-----------ARR10                                                                               --------->ARR14(3)                                                                               <---------ARR14(3)                                             <---------ICU4                    <---------ARR11(3)                                             --------->YAB1                    <---------AGP1     <--                                            ------------>CBF                 ----------->ARR10    ---                                            <---------ATHB12             --------->At4g35610      ---                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->CCA1(2) ---                                          --------->WOX13(1)           <------ZmHOX2a(1)          ---                                        ------------>CBF               =================HOX2a_HOX2a                                        ------>MYB46(1)                ================HOX2a_HOX2a---                                        ------>MYB83              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       ----------->RAV1(1)      <-----------TBP--------->AGP1     ---                             --------->TOE2(3)                --------------->AGL15         ---------                          <-----------GT1--------->MYB46(3)   <---------------AGL15     ------>ZmHOX2a(1) ------->CBF        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ----------->RAV1(1)==============HOX2a_HOX2a ------GT1     <---------ARR14(2)    --------->MYB46(3)      ----------------->AGL3<---------At4g35610 >YAB1         --------->ARR14(2)<-----------HVH21           ----------------->AGL2--------->At4g35610   caatccacatgaaaccagaacttgtaagttacctcagtcaccaacaatcaatactcgaacttagccacatataggagctaagatctgctccttattaaac  2309800                                                               <------ZmHOX2a(2)                                                              <---------ARR11(3)                                                              --------->AGP1                                                              --------->ARR11(3)                                                             --------->GLK1(1)                                                    ------>MYB46(1)                                                    ------>MYB83------>ZmHOX2a(2)      <-----------GT1                              <---------ALFIN1    <---------AHL20(2)                            <---------MYB55(2)    --------->AHL20(2)                            --------->DEAR3(1) -------ANAC55(2)                                 <---------MYB111(2) -------->GT1                                     --------->MYB46(3) ------>ANAC46                                   --------->ANAC58 ------>ANAC55(1)                      --------->YAB1        <---------GLK1(1) ------>ANAC55(2)           --------->ICU4       --------->ANAC58                                   < ------>ANAC58       <---------ICU4  --------->ANAC58   ------>MYB83                  ----------->GT1 ------>ANAC58    --------->YAB1     --------->ANAC58   ------>MYB46(1)             ---------->DOF2 - >AHL20(2)       <-------TEIL      --------->MYB46(3) --------->AtMYB61   --------->At4g35610   -----   acgtaatttaacagtttgattcatcatctcattatcaacaagcacaacatcacccacctacagagatcttaatataagctaagatgtaaagtaaacacat  2309900                                                                                      <---------ICU4                                                                                      --------->ATHB12                                                                              <---------YAB1                                                                            --------->ANAC55(2)                                            <----------DOF2      --------->GLK1(2)   --------->ICU4                                  --------->LBD16               <---------GLK1(2)    <---------YAB1                                 --------->ANAC46      <---------HSFB2a(1)  <---------ANAC55(2)                                 --------->LBD16       --------->HSFB2a(1) <-------TEIL--------->TOE2(3)                  <---------TOE2(3)      --------->ARR11(3)     --------->ARR14(2) --------->YAB1  --------->At4g35610           <---------LBD16        <---------HSFC1(2) --------->CCA1(2)  <---------At4g35610         <---------ARR14(2)       --------->HSFC1(2)--------->ARR14(2) ---------HSFB2a(2)           --------->ARR14(2) --------->At4g35610     <---------ARR14(2) -------->HSFB2a(2)       <---------------AtSPL8 <---------At4g35610   --------->LBD16<--------HAHB4 ---->GLK1(1)     <---------TOE1(3)      <---------ARR11(3)     <---------ARR14(2)<-------TEIL   ttccagatgaaacaaatttcaaggtaagagagtacccggaaaatgtctttgagcagaaatttctcagattctccagatacatgattcatcattagacaga  2310000                                                                                          <----------                                                                         --------->AHL20(2)                           --------->TOE2(3)                           --------->TOE2(3) <-------TEIL                           <---------ANAC58                    --------->MYB52(1)---------->DOF2 ----          --------->AtLEC2 <---------ANAC58                 --------->TOE2(3)--------->YAB1      ----   cttcaaaactccatccaagtttgctacttccttgatgcattgaattggaaactctatggaaaacttaactgaaacttaattagaaaagagattcaccaca  2310100  Previous    Next  AGI:  At4g04601.1    Description:  unknown protein Range:  from: 2309411    to: 2309569    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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