Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC46                                                  --------->ANAC58                                                  <---------TGA1a                                                  --------->TGA1a                                              ------->GAMYB                                             --------->MYB46(3)                                            ================MYC_MYB                                            -------->P                                            <---------At5g28300                                           --------->MYB52(1)                                   xxxxxxxxxxxxxxxx>smallRNA(s)                                   --------------------->WRI1                                 <---------YAB1 <---------ALFIN1                                <---------At5g28300                                              ----                  <---------ALFIN1--------->ATHB12--------->ANAC58                        <----------ID1               --------->AtMYB61<<<<<<<<<<<<<<<<<LFY                                <---------ANAC58            <---------ALFIN1   <-----------GT1==============MYC_MYB                 <---------ANAC46            --------->REM1(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------GLK1(2)<---------ANAC58  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(s)        <-----------GT1    -----   atgcctcgaaccctacacctccacttgagagatttaccattggactaaccgcacgttagaaaaaattcaaattctcgtttaacaatgcgttgaagacaaa  2238000                                                      <------ZmHOX2a(1)                                             --------->AHL20(2)                                            --------->AHL20(2)       <---------ICU4                                          --------->TOE2(3)--------->TOE2(3)                                         <---------ICU4 --------->GLK1(1)       --------->LBD16                  <---------ATHB12<---------RVE1(1)               <---------TOE2(3)      --------->ANAC46               --------->AHL20(2) <---------GLK1(1)      --------->AHL20(2)      --------->ANAC55(2)            <---------AHL20(2)--------->ARR11(3)      <---------AHL20(2)     <---------LBD16                --------->AHL20(2)==================HOX2a_HOX2a<---------AHL20(2)   <---------ARR14(2)           --------->AHL20(2)---------->DOF2<------ZmHOX2a(2)<---------AHL20(2)   <---------REM1(2)        ----------->GT1<---------YAB1--------->ARR11(3)   <---------AHL20(1) ----->DAG2            <---------AHL20(2)--------->ATHB12<---------ARR11(3)   <---------AHL20(2)   <- ----->DOF2            --------->AHL20(2)--------->YAB1<---------ARR11(3)     --------->AHL20(2)<xxxx   aagtctatacgggataaaaaactatttaaaatgaaaaaataaatcattaaaaaaaaggatatcttagatcaacatcacaatttttttatttagatttgat  2238100                                                                               --------->TOE2(3)                                                                              --------->ATHB12                                                                              <---------ICU4                                       --------->ANAC58  <-----------HVH21    --------->YAB1        <----------DOF2    --------->YAB1  ------------>CBF       --------->YAB1 --------->AHL20(2) -     <-----------GT1      --------->At4g35610           <------MYB83         --------->ICU4         < --------YAB1      <-----------GT1     --------->ANAC58 <------MYB46(1)      <---------ATHB12   ----- xxxxxxxxxxxxxxxxxxxsmallRNA(s2) <---------AHL20(2)    --------->MYB59----------->GT1 --------->MYB52(1)   tatcaattttcttttttaaaatcacctcatcagaatttatcaagaaacaattttagctaggtcacctctaataagtgaaatcattaaacaacgatataaa  2238200                                                      --------->AHL20(1)                                                      <---------AHL20(1)         ----------->GT1                              <---------AHL20(2)         <---------ZAT6     ----------->GT1           --------->AHL20(2)    <---------ALFIN1     ---------->DOF2        --------->YAB1           --------->AHL20(2)   <---------ALFIN1   <---------YAB1         <------------CBF           <---------AHL20(2)   --------->AtMYB61 <---------ICU4         <---------YAB1           <---------YAB1  --------->ARR14(2) --------->YAB1         --------->AHL20(2)      ------------>CBF <---------ARR14(2)      <---------WRKY12 -------->ICU4          --------->AHL20(1)     --------->YAB1    ---------->TaMYB80   <<<<<<<<<<WRKY18 ---------ATHB51        <---------AHL20(2)<---------STY1(2)      <---------KAN4(2)    --------->ANAC58 ------->CBF           --------->AHL20(2) --------->STY1(2)   <---------TOE2(3)       --------->ANAC58   caattatgaaagtgttactccaaaattttattgtaacaagtactagctattacaattaaattttaagaatatgctaccacacctagtcaagtcaactagt  2238300              <---------ANAC55(2)              --------->ANAC55(2)           ----------->HVH21          <-----------HVH21          <-----------TGA1         <---------O2         --------->ANAC58         <---------TGA1a--------->AtLEC2         --------->O2   --------->ANAC58         --------->bZIP60(1)         --------->ANAC58                   <---------AHL20(2)         --------->ANAC46------------>CBF   --------->AHL20(2)                              ---------         <---------ANAC55(2)      ----------->GT1                                       --------->TOE2(3)         --------->TGA1a--------->ANAC58   --------->AHL20(2)                           --------->TOE1(3)         <---------bZIP60(1)    <---------ANAC46                 <------ZmHOX2a(1)   ------->GAMYB         --------->ANAC55(1) ----------->TGA1            --------->YAB1             --------->MYB46(3)         --------->bZIP60(2) <---------ATHB12         <---------------AGL15         <---------MYB111(2)         --------->ANAC55(2) ----------->HVH21        ------>ZmHOX2a(1)           <-----------GT1        <-----------STF1--------->ANAC46--------->AHL20(2)      ----------->GT1 --------->AHL20(2)  <---------CCA1(2) <-----------GT1     <---------AHL20(2) <---------YAB1<-----------GT1<---------DAG2   acccatttctcacgtcacatattaacatgcaatgacgggttataaattaatctatcctataatgagaggaaaaaaaaaccattttaacaaccttatcaat  2238400                                                                                                    -                                                                                                   <-                                                                --------->TOE1(3)                <---                      ----------->GT1                           --------->TOE2(3)  <---------DEAR3(2) --->CBF  ---------->DOF2                       ------>ZmHOX2a(1)           <-------TEIL        -----   ttgtgtaaatgggaaagagttgtgttgtgactagttccttctcgcttctccttctcttccttcaaaccctaaaatatgttcatgccggtttcatttgcta  2238500                                      <-----------ARR10                                      --------->ARR14(2)                                      <---------ARR11(1)                                      ------->TEIL                                        --------->ANAC58                          <------NtERF2                                              <---------HSFB2a(2)                         ------>NtERF2<---------ARR14(2)                             --------->HSFB2a(2)             --------->YAB1<-----------RAV1(2)                                   <---------ARR14(2)    <----------DOF2      <-----------TGA1                                       <-------GAMYB    <---------DAG2      <---------bZIP60(1)                                    <---------DEAR3(2) ------>NtERF2       <---------DEAR3(1)<---------CCA1(2)                       <---------MYB46(3) -------->DEAR3(1)   --------->ANAC46<---------ARR14(1)                       <---------DEAR3(1) --------------------WRI1<-----------HVH21                                  ------->GAMYB --------->ANAC58 ------DEAR3(1)     <---------LBD16  <---------CCA1(2)                      ------------>AtMYB77 <--- ---->SPL7   --------->TOE2(3)    <---------TOE1(2)                      --------->MYB52(1)  ------->TEIL   cggcgactttttcaatgttaactacggcgtcagtcgaacgtatctcttctcttctcttccttctaacgtcgtttctaacggcggtttctacaacgcatcg  2238600                              ------->MYC3                              <-------MYC3                             --------->ANAC46                          <---------WRKY38(1)                     <---------ZAT2                          --------->ZAT18                --------->HSFB2a(2)                  <------                     =====================================MYC_MYB--------->ANAC58           ---------                     ------->GAMYB              <---------TGA1a  --------->ANAC58          <---------YAB1        --------->GLK1(2) <---------ZAT18       <---------O2 --------->ANAC58           --------->TOE1(2)    <------NtERF2 --------->MYB52(1)  <---------DAG2     <---------HSFB2a(2)      --------->HSFB2a(2) ------MYB52(1)   ----------->RAV1(1)----------------->AGL1  --------->ANAC58     <---------HSFB2a(2)   tttggcagagattccaaaaacaacagagtccacgttgttgccttatgcagacgaggctacgagaagcaagcttgtaagacatgtctcgaacatgtgattg  2238700                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            ---------                                                                                           --------->MYB46(3)                                                                                           <---------MYB55(2)                                                                                           <---------ATHB12                                                                                          ------>MYB46(1)                                                                                          ------>MYB83                                                                                          -------->P                                                                                         --------->MYB55(1)                                                                                        --------->DEAR3(1)                                                                                        <---------MYB111(2)                          ---------->DOF2                                               <---------MYB55(2)                    --------->ANAC58                                 <---------ANAC58   --------->AtMYB61                    --------->ANAC58        <-----------HVH21        <---------ANAC58   <---------MYB46(2)                    --------->ANAC46        <---------PCF2          --------->MYB52(2)  --------->MYB46(3)                   ------>ZmHOX2a(1)   <---------ANAC46          --------->HSFC1(2)     <---------MYB111(1) ---WOX13(1)   <---------ZAT18         <---------O2           ------>NtERF2          --------->REM1(1) >ATHB12       --------->ZAT18    <----------DOF2            --------->DEAR3(1) --------->ANAC46   aagacacaaaatccaagtgtcctcgccaaaaagagtctttctcgtgggtcactgatgaattcgacgacgtttcttgctctctacgttacaccaaccactc  2238800                                                --------->ZAT6                                              --------->MYB52(1)                                     --------->TOE1(3)                                    --------->ZAT6                             <---------YAB1--------->TOE2(3) -->ANAC46               ------>MYB83--------->TOE2(3) -->ANAC58               ------>MYB46(1)   --------->TOE1(3)                           XXXXXXXXXXXXXX -->ANAC58             <---------MYB59    --------->ZAT6                               XXXXXXXXXXXXXX >AtMYB61       <---------ARR11(3)<-----------GT1                                     <---------At4g35610   aactcttggcaaactcgagctcttaccaaatactattaaccctaaccctaacagtatagattccaaattcaacaacatggccatgttcagccaagaatgg  2238900  Previous    Next  AGI:  At4g04500.1    Description:  protein kinase family protein. Identical to Cysteine-rich receptor-like protein kinase 37 precursor (CRK37) [Arabidopsis Thaliana] (GB:Q9XEC7); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G04540.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G04490.1); similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT4G04510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70881.1); contains InterPro domain Protein of unknown function DUF26 (InterPro:IPR002902); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein k Range:  from: 2238409    to: 2240863    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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