Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    ----------->GT1                                                  --------->AHL20(2)                                                  <---------AHL20(2) --------->ATHB12                                                  --------->AHL20(1)<---------YAB1     --------->YAB1                                                 --------->AHL20(2) --------->ICU4  ---------->DOF2          <---------ATHB12         <---------ARR14(2)        --------->AHL20(2) --------->At4g35610   <---------GLK1(2)               --------->ARR14(2) <---------AHL20(2)        --------->ZAT18 --------->RAV1(2)                <------ZmHOX2a(1)   --------->AHL20(2)        <---------At4g35610--   aacctgattctaatcaatgtagattagaagtccaaaggatactctccaaaaaaaaattaaaaaaaaaatagtgattagagggagcacaaagataaatgta  2166600                                                       --------->ANAC46                                                       --------->ANAC58                                                       --------->ANAC58                                                       <---------ANAC55(2)                                                       --------->ANAC55(2)                                                   ----------->RAV1(1)                                                 --------->LBD16                                                <---------HSFB2a(2)                                                --------->HSFB2a(2)                                                --------->ANAC46                                                --------->ANAC58                                                --------->ANAC58                                                --------->ANAC55(2)             <---------ARR11(3)                <---------LBD16      --------->ZAT14                         ------>MYB46(1)      <---------ZAT14                         ------>MYB83                               --------->DAG2     --------->ALFIN1                <----------DOF2   --------->ANAC55(1)              ---------->DOF2 ------->ANAC46         <----------DOF2  <-----------GT1                           ----------->GT1 --   aacgcgagtgtagaagataactatctctttacaaatagtctttataccttccgcaacaagtaattgttctcatcagtctctctatgagtaaaaagctaag  2166700                                        --------->TOE2(3)                                        <---------MYB59                                        --------->TOE1(3)               <---------At4g35610             <---------ALFIN1          <---------ANAC55(2)   <-----------GT1 <---------ATHB12            --------->ZAT14        --------->YAB1   --------->MYB52(1) --------->ANAC58    --------->TOE2(3)           <---------ALFIN1<-----------RAV1(2)   --------->ANAC58      --------->ANAC58    <--------- -------->DOF2           --------->GLK1(2)       --------->ANAC58    <--------P   ------->GAMYB    <-   cgaaagcgagactccacactctcagcgattcaggcgataatacctaaactcaagtaagggtttttactctggtaagctaatcaacgctctcatctttaac  2166800                                                                                               <-----                                                                                              <------                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                            <--------                                                                                            ---------                             --------->ATHB12  --------------->AGL15                        <--------                 <-----------GT1      ------>ZmHOX2a(1)             <-----------GT1  <---------ANAC46   <---------RAP2.6(2)--------------------->WRI1                <----------DOF2      <---------ANAC58 -DOF2  <----------DOF2     <---------YAB1  XXXXXXXXXXXXXXXXXXXXX>MIR830*            <---------ANAC58 -----------CBF<-----------GT1     ---------->ID1               <---------DAG2    <----------DOF2 <--   aaattgcgacctttatatttctctcttcttatgattcgtcctctatgttctcaaaatagcttagaactttttacaaatttcagactttcttgtaatgatt  2166900                                                     <----------DOF2                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                                              <---------LBD16                                          <---------ARR14(2)                                          --------->ARR14(2)                                         <------ZmHOX2a(1)      ------------>CBF                                         =================HOX2a_HOX2a                               <---------ARR14(2) --------->ARR11(3) ----YAB1                      --------->ARR14(2) <---------ARR14(3) ---GLK1(2)                   <------ZmHOX2a(1)   --------->ARR14(2) >HAHB4                       =============================HOX2a_HOX2a -ATHB1                <---------YAB1    ==================HOX2a_HOX2a --ICU4             <---------YAB1     <---------TOE2(3)    <------MYB46(1) -ATHB12            --------->ICU4     <---------TOE1(3)    <------MYB83 >ICU4        ------->TEIL    ============================HOX2a_HOX2a       ---------->DOF2 <-------- -YAB1        --------->ARR14(2)<---------GLK1(1) <---------ARR11(3)       --------->AHL20(2)     <-- -------YAB1  <---------ARR14(2)--------->GLK1(1) <---------ARR14(2)  ------------>CBF   <---------AHL20(2)   cttatgggtttaaacgtatttgatgatgaataggatttgctaaggatttggggatctttgttcggtttcaatgtcaataaaagaaccatattttatgact  2167000                                                                                             <-------                                                                                            ---------                        --------->At4g35610                                                 <--------              --------->At4g35610                                                         --------->YAB1         --------->YAB1 --------->ZAT2                                                   <---------YAB1        <------ZmHOX2a(2)                                                                --------->ICU4       <---------ARR11(3)                                                              <---------ICU4       <---------ARR14(2)             <------MYB46(1)                                  --------->YAB1       --------->ARR11(3)--------->TOE1(2)                                             -------->HAHB4    <---------TOE2(3)   <---------At4g35610<---------YAB1                             <---------ATHB12 -YAB1<------ZmHOX2a(1) <---------ZAT2<------MYB83                   --------->ATHB12 <---------YAB1 -------TOE2(3)        ------->TEIL  --------->MYB59              <----------DOF2     --------->ICU4   gagattgaggatcatgagatgaatgaagctgcgatgagtttggttatgttttctaaacaagtttatgactttgatttgactcatggtaatgatgatgatt  2167100                     <---------GLK1(2)                 ---------->DOF2 --ICU4      --------->At4g35610                       ----------->GT1 >ICU4       <---------At4g35610             <---------ZAT14                ---------->DOF2 -YAB1    <------ZmHOX2a(2)   <---------ANAC46  --------->LBD16  <---------LBD16 --------->ZAT18    <   ccatggatttagatcagcttaaagattgtgttgagtcgatgctagacttcagggaaatggtttctaactcgggtatggaaaagtctactacttgcagtga  2167200                                                                      <---------ZAT6          -------                                                                    <---------ANAC58       <---------WRKY38(1)                                                                    <---------ANAC46     <-----------HVH21             ----------->GT1                <-----------HVH21       <---------ANAC58    <---------MYB46(3)      --------------->AGL15       --------->ANAC58                <---------YAB1    <---------AtMYB61 -----------RAV1(1)               --------->ANAC58  <-----------RAV1(1)          <----------DOF2   tgttgttgctctgagaagtaaattgcagagtaagtcaagtcatagatgtcaaatatgtggcaagagttttgagtgttatcaagctttaggtggtcaccga  2167300                                                        <---------YAB1                              -                                                      --------->YAB1                            =====                                                     <---------YAB1            <------ZmHOX2a(1)=====                                                   --------->YAB1              ======================                                                ---------->DOF2                ======================                            <---------ANAC46 --------->YAB1   <---------At5g28300               <----                   ----------->GT1          <---------YAB1   <-----------GT1<---------ICU4    <------ -->DEAR3(1)   ---------->DOF2    ---------->DOF2 --------->ICU4        <-------TEIL       --------->ALFIN1   agacttcatagaccgattaaagggaaattagcgcgtaaaagggagtattataaagatgataattcactgtttgattcatcaggaccatcaagagtggagg  2167400    ------>ZmHOX2a(2)   <------ZmHOX2a(2)  <---------AGP1  <---------ARR14(3)  --------->ARR14(2)  --------->ARR11(3)  --------->ARR14(3)  <-----------ARR10  <---------ARR11(3)  <---------ARR14(2) ---------->ARR10                                                    ---------->DOF2 =========HOX2a_HOX2a                                            --------->HSFB2a(2) ==========HOX2a_HOX2a                                  ----------->GT1             <---------At4g35610 =========HOX2a_HOX2a                            <----------DOF2 <---------HSFB2a(2)--------->ZAT2 ==========HOX2a_HOX2a                           --------------->AGL15              --------->At4g35610 --ZmHOX2a(1)                                    <---------------AGL15   <---------ARR11(3) ---ANAC46        <---------ANAC46<---------DEAR3(1)    --------->YAB1   --------->ARR11(3)        <-   agaagatcttagattgtgttgagttgaaacaagacttcggcgaactgcttcctttgaatagtaagtttcagaaaagacctgtgagtagctgcagttatag  2167500  Previous    Next  AGI:  At4g04404.1    Description:  zinc finger (C2H2 type) family protein. similar to zinc finger (C2H2 type) family protein [Arabidopsis thaliana] (TAIR:AT3G29340.1); similar to zinc finger, imprinted 1 [Rattus norvegicus] (GB:NP_001100943.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 2166971    to: 2167978    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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