Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <---------At4g35610                                                                <-----------RAV1(2)                                                               <---------ZAT2                                                           --------->ANAC58                                                           --------->ANAC58          <---------SPL7                                     <---------HSFB2a(2)   --------->ANAC46          ------>NtERF2                                     --------->HSFB2a(2)--------->ARR14(2)           --------->ORA47(1)                                 <---------ANAC58       <---------REM1(2)      --------->ARR14(2)        ------>MYB46(1)          <---------ANAC58       <---------ARR14(2)<---------ZAT14        ------>MYB83             <---------ANAC46     <---------ZAT18     --------->ZAT14 -------->ANAC46             <---------ANAC58         <---------SPL7   <---------At4g35610 -------->bZIP60(2)     <---------DEAR3(1)           <---------ANAC46  --------->At4g35610<---------ALFIN1 ----->ZAT18            <---------MYB46(3)           <---------ANAC58 --------->ALFIN1   ------>ZmHOX2a(1) ------ZAT18          <-----------HVH21              <---------ANAC58--------->ZAT18 <---------RAP2.6(3) ------ZAT14   --------->YAB1<---------ANAC58   ----------->RAV1(2) --------->ALFIN1--------->DEAR3(1)   gcacatcaccttccctataatcgcggtcgatgcttgcttgtggaagtcccccctggcgtacacgctgcaggtgtgctgcagtatcgccgtcctcacttca  2150500                                                       --------->ANAC58                                                       --------->ANAC46                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       --------->ANAC58                                                      <------NtERF2                                                     ------>NtERF2                                                     <---------ATERF1(1)                                                    --------->DEAR3(1)                                                   --------->RAP2.3(1)                                                   --------->ATERF1(1)                                                   --------->DEAR3(2)                                                   <------NtERF2                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                              --------->ALFIN1                                             <-------MYC2                                             ------->PIF5                                             <-------PIF5                                             ------->MYC2                                             ------->MYC3                                             ------->PIF4                                             <-------MYC3                                             <-------PIF4                                             ------->MYC4                                             <-------MYC4                                            --------->ANAC55(2)                                            <---------O2                                            --------->TGA1a                                            <---------TGA1a                                            --------->O2                                 --------->ANAC46 <xxxxxxxxxxxxxxxxsmallRNA(s)             <---------ANAC46                      ---------->ID1        <---------ANAC55(2)                            <---------AtLEC2                  <----------DOF2--------->ANAC58 ------>NtERF2                            <---------ANAC58            --------->At4g35610  --------->ANAC58<---------PCF2       <---------YAB1       <---------ANAC58   --------->ZAT14====================================bZIP_DOF --------->At4g35610 --------->ANAC58 <  <---------MYB52(1)<-----------RAV1(1)    ------------>OsbHLH66    --------->YAB1 --------->ANAC58 <   aaccgttcagtatcatctaactttgttgcataaactcgccatgggcacgtggtgccgacgcaaacagctatcaccatagttggacacgacttggcatgta  2150600           <---------ANAC58           <---------ANAC58        <----------DOF2                                                           --------->ARR11(3)       --------->HSFB2a(1)                                                        <---------ARR11(3)       <---------HSFB2a(1)                   ------->GAMYB                       --------->RVE1(1)       <---------HSFC1(2)                   --------->MYB46(3)                   --------->CCA1(1)       --------->HSFC1(2)                 ----------->RAV1(1)              --------->ANAC58  --------->ALFIN1                   <---------ANAC46                      --------->ANAC58 ---------bZIP60(2)           <---------ANAC58                             --------->ANAC46 ---------ANAC46              <---------ANAC58      <----------DOF2       --------->LBD16   tgaagtggaactttcgtcggatagcatgtattgctagttttgtgcaacagtcgtctttgtttttgaacaatcttcccacgaaaatatcatccccttcgta  2150700                                     --------->YAB1                                  --------->WOX13(1)       --------->ANAC46                               <-----------HVH21         <---------DOF5.7(2)        <---------AHL20(2)  --------->At4g35610          ---------->DOF2      <----------DOF2       <---------At4g35610        --------->DOF5.7(2)    <---------YAB1      --------->TOE2(3)    --------->GLK1(2)   --------->ANAC46        <---------TOE2(3)     --------   gttagcatctttaatcgctcgctggagagcatctgtcaatgacaaaaacacaaaaccattaacgcgatatgttgagatttatcatttagttatacaggtt  2150800                                                                                                   --                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               ------                                                                                             <-------               <---------YAB1                                                                <-------             <---------ICU4                                            --------->YAB1        <-------             --------->ATHB12                                         <------ZmHOX2a(2)      <-------             <--------HAHB4                                          *TSS                    <-------             --------->YAB1                              <---------DEAR3(1)                  <-------            <---------YAB1                  <---------WRKY12 <-------TEIL            <------MYB83 <--            --------->ICU4                  <---------WRKY38(1)------->TEIL          <------MYB46(1)<            <---------ATHB12          <---------LBD16  <------ZmHOX2a(1)  ------------>CBF   <-------   <---------ARR11(3) <---------ARR11(3)--------->LBD16======================HOX2a_HOX2a    xxxxxxxxx ->ANAC46 --------->YAB1  <-----------GT1 <-----------HVH21 --------->ALFIN1     <-----------RAV1(1)-   accctgatattctcatcattactggatattaccttcttcacccgggtcatcgaaataggagggtgcatctcgatcatacaatactgttggtactggcgtg  2150900                                                                                                    -   --------->DEAR3(2)                                                                               -  --------->SPL7                                                                                   --  --------->ARR14(2)                                                                               -- ------->HSFB2a(2)                                                                            ------- ---->ARR14(2)                                                                               xxxxxxxx -----ARR14(2)                              <---------ARR11(3)                             ------->GAMYB ----->HVH21                         <---------WRKY18(1)                                   --------->ANAC46 --->ALFIN1                         ----------->HVH21                                      --------->TOE1(3) --TGA1a                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <xxxxxxxxx --O2                          --------->MYB59                                       <xxxxxxxxxxxxxxx --bZIP60(2)             --------------->AGL15                                      <xxxxxxxxxxxxxxxxsmallRNA(s) --ANAC46                <---------------AGL15                                    <---------MYB52(1)- --ANAC58               <-----------------AGL3           ------->GAMYB       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) --ANAC55(1)            ----------------->AGL3          <------------MYB.PH3(1) ----------->GT1    -- -------LBD16           <-----------------AG--------->GLK1(2)           --------->ARR14(2) <xxxxxxxxx ---------SPL7          ----------------->AGL2         <---------At5g28300<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --ANAC58               ----------------->AGL1        --------->ARR14(2)<---------ARR14(2) --------->TOE2(3) xxxxxxx>smallRNA(s)    <-----------------AGL1    --------->ZAT6     --------->TOE2(3)   <---------At5g28300 -------->LBD16  xxxxxxxxxxxxxxxx>smallRNA(i)   --------->MYB52(1)   --------->TOE1(3)  <-----------GT1   tccggaccgtctaaaacaaaatcgtctccaaattaggcatgaccaaaatctaacagtaaccgtatttcgaaccgtaaccagaccgtttattaaccgtaac  2151000       <------------MYB.PH3(1)     --------->MYB52(1)     <---------ARR14(2)     --------->ARR14(2)  ------->GAMYB                                                                                   ---  --------->TOE1(3)                 <---------MYB52(1)                                            ---  --------->TOE2(3)                 --------->DOF5.7(2)                                         <----  --------->YAB1               --------->ARR14(2)                                       --------->At5g28300  --------->ANAC46             --------->MYB52(1)                                      ----------->GT1 <------------AtMYB77       --------->TOE2(3)                                       --------->ARR14(2) ----->MYB83                --------->TOE1(3)                                       --------->MYB52(1) ------->P                  --------->ANAC46                                        <---------ARR14(2) ------->MYB52(1)  --------->At5g28300                        <-------GAMYB      --------->TOE2(3)--- ---->MYB83       ----------->GT1<------------AtMYB77 <-------TEIL  --------->AHL20(2)<------------MYB.PH3(1) -->SPL7------->GAMYB     <---------At5g28300        <------ZmHOX2a(2)           --------->TOE1(3)--- xxxxxxxxxxxxxx>smallRNA(fl3)  <---------ARR14(2)   <---------ARR11(3)    <-----------GT1--------->DOF5.7(2) xxxxxxxxxsmallRNA(fl3)  <-----------GT1            --------->AGP1<---------TOE2(3) xxxxxxxxxxxxxxxxx xxxxxxxsmallRNA(fl3)    --------->MYB52(1)         --------->ARR11(3)   --------->AHL20(1)    <----- ----->MYB46(1)------------>MYB.PH3(1)<---------DOF5.7(2)   <---------TOE2(3)    --------->YAB1------ ---->MYB46(1) --------->MYB52(1)<------------MYB.PH3(1)    <---------TOE1(3)   ----------------->AG xxxxxxxxxxxxxsmallRNA(se3) ------->GAMYB----------->GT1    <---------ANAC46   -------->P<---------MYB52(1)   ccaaccgtaaccgtataaaacggttaataaccgtaaccgttaactgtgaaaatagatccattacggttaagaaaatatactaaccataaccgttaattaa  2151100                                <-------GAMYB                                --------->At5g28300                               ----------->GT1                             --------->SPL1(2)                             --------->SPL7                            --------->SPL1(1)                            <---------SPL1(1)         --------->YAB1    <---------SPL1(2)      <---------ARR14(1)   <---------SPL7    ------->GAMYB        <---------------AtSPL3   <------------MYB.PH3(1)------->GAMYB  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ARR14(2)      --------------->AtSPL3 <---------ARR14(2)     <---------At5g28300       ------->GAMYB --------->MYB52(1)    <-----------GT1          <---------At5g28300 ------>TOE2(3)      <---------MYB52(1)        <-----------GT1 ------>TOE1(3)     <-------GAMYB          <---------MYB46(3) -----At5g28300    <---------DEAR3(2)    ------->MYC3 ---->GAMYB        <---------MYB46(3)    <-------MYC3 ------>ANAC46   <---------MYB52(1)   ------->GAMYB             --------->TOE1(3)     <---------ANAC46 xxx>smallRNA(se3)<---------DEAR3(1)<---------At5g28300----------->GT1        <---------REM1(1) ------GT1 xxxxxxxxxxxxxxxx>smallRNA(i) <---------ANAC46        --------->TOE2(3)<-----------GT1    - --->MYB52(1)   <-----------HVH21  --------->MYB52(1)  <---------ZAT6 --------->AHL20(2)            <   ccgtaaccgtatcaaaaccgtcggttaaccgtacggttaaccgcgtggttaaccgtattgttaaaaccttaaaaatatagttgtaactgtgtataattct  2151200                 --------->AHL20(2)               <---------------AGL15        --------->AHL20(2)        --------->ATHB51        <---------ICU4        <---------AHL20(2)       <---------YAB1       --------->ICU4     --------->YAB1     <---------ICU4                                                                      --------->WOX13(1)    --------->ICU4                                                                      ---------->DOF2    <---------AHL20(2)                                                               --------->YAB1    <---------ATHB51                                                                 --------->TOE2(3)    --------->AHL20(2)                                    <------ZmHOX2a(2)          --------->TOE1(3) --------->AHL20(2)                           <---------ZAT18                 <----------DOF2      <- -------->AHL20(2)                ----------->GT1      <---------YAB1   --------->MYB46(3)      <---- ---------AHL20(2)    --------->YAB1          --------->ZAT18    <-----------GT1  <-----------GT1----   aaataaataattatttcactaaaatagtaactgaaatcgtttaatatgtccactactacgatcgaagttactcaactactctttttaccataaatcaaat  2151300                                                                                                -----                   --------->AHL20(2)                                                           <----                  <---------YAB1                                                                <----                --------->YAB1                                                              ---------                <---------ICU4                                                              <--------               --------->ICU4                                        <---------YAB1         <--------            --------->AHL20(2)                                      --------->YAB1         --------->AHL20(2) --------YAB1  <---------YAB1                            <---------ARR11(3)                <---------AHL20(1) -----ATHB12<---------YAB1                               --------->ARR11(3)                --------->AHL20(1) ----->YAB1 <---------AHL20(2)            --------->TOE2(3)      <----------DOF2    ----------->GT1   cataaatagttcatattattattatttatactcttaaaactatttcttaatgctcacaacatcttctctttaatattgtttttgtttggaaaatataatt  2151400  Previous    Next  AGI:  At4g04392.1    Description:  transposable element gene. Mutator-like transposase family, has a 4.7e-51 P-value blast match to Q9SHN7 /450-633 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 2148616    to: 2150869    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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