Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                   <---------MYB59                                                --------->AHL20(2)      <---------YAB1                                      <---------ARR14(2)       ------->TEIL<---------TOE2(3)      <--                                 ----------->GT1<---------AHL20(1)      <---------AHL20(2)        ---                                --------->HSFB2a(2)          <---------ZAT14                      ---                                <---------HSFB2a(2)          --------->ZAT18                      <--     --------->ANAC58<------NtERF2    --------->ARR14(2)     --------->ZAT14                     <---     --------->ANAC58<---------At4g35610        <---------AHL20(2)     --------->TOE2(3)    ------->TEIL     --------->ANAC46--------->At4g35610        --------->AHL20(1)   --------->ICU4     <---------TOE2(3) ------->GT1      --------->At4g35610<---------CCA1(2)       <---------ZAT18       <---------ZAT6----   tgtaaataagcaatgcgatgggctgcaaactcttctcgtaaatctgcaaatttattaagacagtgcacctaaatattaatgaagagagttaatgaatcaa  2127700                                               <---------HSFB2a(1)                                               <---------HSFC1(2)     <---------ICU4                           <---------ANAC46    --------->KAN4(1)     --------->ICU4                           <------MYB46(1)     --------->HSFB2a(1)   <---------YAB1               <---------ANAC58                --------->HSFC1(2)  --------->YAB1 -------AHL20(1)           <------MYB83        <---------KAN4(1)  --------->ICU4 ------>AHL20(1)          --------->MYB46(2)<------ZmHOX2a(1)--------->ANAC58 ------>AHL20(2)          --------->MYB111(2) <---------KAN4(2)   <---------ATHB12      <-------TEIL -------AHL20(2)      <---------TOE2(3)   <---------------AtSPL8  <---------YAB1    <------ZmHOX2a(1) ------ATHB12  <---------ANAC46           <---------TOE2(3)  --------->ANAC58     <---------TOE1(3) ----->AHL20(2)<---------ANAC58    ----------->GT1         ---------->DOF2        <---------TOE2(3)   taaatttgaacatcgtgacttgttaagtttggtgagaggggaataaggaacgttctatatgtaaagcaatgataattaagagttaaggagttcatagttc  2127800                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                         <------ZmHOX2a(1)                                     <---------AHL20(2)                          --------->MYB46(3)                                    --------->AHL20(2)           <-----------HVH21    <---------LBD16   atgtttttctctagtttggacttgagtccaaaatccaaattaatccaaaacaatgttgagcctaaactgtcccaagactcccaacaactcaggaagctct  2127900                                                       --------->AHL20(1)                                                     <---------ARR11(3)                    <---------YAB1                   --------->AHL20(1)     --------->YAB1               <---------ICU4                        <---------AHL20(1)     ----------->GT1               -------->ATHB1                        --------->ARR11(3)    <---------ATHB12               --------->ATHB12                 ----------->GT1  <---------MYB52(1)               --------->YAB1              ----------->RAV1(1)  <-----------HVH21        <----------DOF2   <-----------GT1  <---------ALFIN1     <---------RAP2.6(3)         <-------- --ARR11(3)   <---------ATHB12            ----------->HVH21    XXXXXXXXXXXXXXXXXXXXXXX>MIR829.1 ----- ->ARR11(3)   <---------YAB1             --------->SPL7<---------AHL20(1)------>MYB46(1)   <--------- -At4g35610   --------->ICU4          ------>ZmHOX2a(2)--------->AHL20(2)------>MYB83  --------->At5g28300   tgctgttttccttttaatcattgtgatattacattcttgatcgtcccacagggaaaatattttagccgttagaccaaatgataaaaaactgtaactgttg  2128000         <------NtERF2                                              --------->ANAC58        ------>NtERF2                                               <---------ALFIN1       <---------ANAC46                                        <---------ZAT18       --------->DEAR3(1)                                      <---------ZAT14       <---------DEAR3(1)                                      --------->ZAT14          *TSS   --------->SPL7                     ------>ZmHOX2a(2)        --------->ZAT18------------>CBF ---RAV1(1)           --------->TOE2(2)                    <---------------AtSPL8 <---------ATHB12<-- ---->ATHB12          --------->TOE2(3)------------>CBF ---------->DOF2      --------->TOE2(3) <----- ---AtMYB77<---------DEAR3(2)  <-----------GT1       <-------TEIL   --------->ANAC58<-----------GT1   atgggaacggcgtcgtttcgctaaccttcgttttaactgatctcaattctcaaggttcaaaagagtacacacacacttatctcaattatccactgaaaca  2128100                                                                                               ------                                                                                               ------                                                                                               ------                                                                                               ------                                                                                             <-------                                                                                           <---------ALFIN1                                                                                         --------->DEAR3(1)                                                                                         ----------->RAV1(1)                                                                                        <------NtERF2                                                                                       <---------RAP2.6(3)                                                                                       ------>NtERF2                                                                                      --------->DEAR3(1)                                                                                      <---------ATERF1(2)                                                                                      --------->ATERF1(2)                                             ------>ZmHOX2a(1)                        --------->RAP2.6(2)                                         --------->ARR14(2)                           --------->ANAC46      --------->LBD16                    <---------ARR14(2)                          --------->ATERF1(1)      ------>NtERF2                <---------ICU4                                    --------->RAP2.3(1)     <---------DEAR3(1)            --------->YAB1         ----------->HVH21          <---------RAP2.6(2)    <---------LBD16             --------->YAB1      <-------TEIL                  ------------------- -----TEIL                 <---------At4g35610    --------->ARR14(2)            <-----------RAV1(1) ----HSFB2a(1)             --------->At4g35610    <---------ARR14(2)       --------->YAB1<---------ALFIN1   ttcgtctccggcgaaacaaaaccagaatgagctctcatcatcaaatcctccaaattcgttctgacccatttgttctatcacactgttgccgccacacacg  2128200                                                                    ------>NtERF2                                                                   --------->RAP2.3(2)                                                                  --------->DEAR4(2)                                                                  --------->ATERF1(1)                                                                  --------->ORA47(2)                                                                  --------->RAP2.3(1)                                                                  <------NtERF2                                                                 <---------ERF1                                                                 <---------RRTF1(1)                                                                 <---------ATERF1(1)                                                                 ------>NtERF2   <---------DEAR3(1)                                                                 <---------ORA47(2)                                                                 <---------RAP2.3(1)                                                                <---------RAP2.3(3)         ---------                                                                <---------DEAR3(1)        <------ZmHOX2a(1)                                                                <---------RAP2.3(2)      <---------At4g35610                                                                <---------RRTF1(3)     <-----------RAV1(2)     <---------At4g35610                                       <------NtERF2    <------NtERF2     <---------ZAT2                                            --------->ATERF1(1) <------NtERF2     --------->At4g35610                                      <---------ATERF1(1)<---------ANAC46     --------->ZAT2                                          <---------DEAR3(1) <---------LBD16 --->ANAC55(1)                                             <-------GAMYB        --------->ATERF1(1) < --->ANAC58                                               <---------ANAC58      ------>NtERF2      -- --->ANAC58                                           <----------DOF2         <---------DEAR3(1)  --- --->ANAC46                             <----------DOF2   <---------ANAC58   <---------LBD16<-------- --ALFIN1                     ---------->DOF2        <---------DAG2--------->DEAR3(1)<-----------HVH21 ---->TaNAC69(2)           ------>ZmHOX2a(1)<---------AtLEC2<---------MYB52(1)<---------RAP2.6(2) ---   cctcaccagctctcttacgcttcaatctcctctaaagcagcccttttcatgtctccctttccgttggcgccgctcttatcgcggcggagtcaggagctca  2128300                                                                                                    -                                                                                                    -                                         --------->MYB52(1)                                         <                                        --------->ARR14(2)                                          =                                        <---------ARR14(2)                                          <                                     --------->ETT(1)                                          ------                                     <---------ANAC46                                          <-----                                <---------ANAC58                                      --------->ANAC58 >At4g35610                     <---------ANAC58                                      --------->ANAC55(2) ---------LBD16                <---------AtMYB61        --------->ATHB12              --------->ANAC58 ----->GAMYB                 <----------DOF2   <---------ATERF1(1)                    --------->ANAC46 ------>MYB46(3)           <---------HSFC1(2)  ------>NtERF2       ================================== -At4g35610                --------->HSFC1(2) --------->DEAR3(1)   ---------->DOF2  <-----------GT1 = -------->HVH21      ---------->DOF2<------NtERF2   --------->REM1(1)    ----------------------->TaNAC69(2)   acgacggagactcatggtagcaaaaaagaagctttggtgtcggaaacggcgactacatcgattgaattgaaaagggtctatccatttcacgaaattgaac  2128400                                      --------->SPL7                                    --------->LBD16                                   <---------HSFB2a(2)                                   --------->HSFB2a(2)                                  <---------LBD16                                <-----------GT1                              <---------HSFC1(2)                              --------->HSFC1(2)                              --------->HSFB2a(1)                              <---------HSFB2a(1)           --------->ATHB12  --------->ARR14(2) -------->O2                 <---------ARR14(2) -------->TGA1a           ------->GAMYB ---------O2             <------------MYB.PH3(1)                                  ----------->HVH21 =====================================MYC_MYB                                     --------->ANAC46 ---------TGA1a        --------->MYB52(1)                                        ------>ZmHOX2a(1) ->TEIL  --------->TOE2(3)<---------MYB59                                   --------->ANAC46    ----- ------------AGL1    <---------ARR11(3)                           --------->TOE1(2)             <---- =========bZIP_DOF   --------->ARR11(3)   --------->MYB46(3)      --------->TOE2(3)            <----- =================================MYC_MYB <-----------RAV1(2)     --------->TOE2(2)       <----------   ccaagtggcaacgttattgggaagataaccgaattttccggacaccagacgatgttgatacttcgaaacctaagttctacgtcctcgacatgtttccata  2128500                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <---------GLK1(2)   <---------ARR11(3)                  <-----------------AGL1                            --------->HSFB2a(1)   --------->ARR11(3)                  <-----------------AG              <----------DOF2 <---------HSFB2a(1) ---->ARR14(2)       --------->ICU4  --------->ZAT18                   ------->TEIL      --------->HSFC1(2) -----ARR14(2)       <---------YAB1  --------->ZAT14         ---------->DOF2             <---------HSFC1(2) ----CCA1(2)  --------->AHL20(2)     <---------ZAT14     --------->At4g35610 ---------->ID1         < -GT1       <----------DOF2     ---------->DOF2          <---------At4g35610 <---------TOE2(3)    ---   tccaaggtctcttccttttaatactgattatgtagaaagttcacagatttggctattccagcttaaagaaatgaactttgtggttttgagaagtttccat  2128600  Previous    Next  AGI:  At4g04350.1    Description:  EMB2369 (EMBRYO DEFECTIVE 2369); ATP binding / aminoacyl-tRNA ligase. similar to OVA2 (OVULE ABORTION 2), ATP binding / aminoacyl-tRNA ligase [Arabidopsis thaliana] (TAIR:AT5G49030.2); similar to OVA2 (OVULE ABORTION 2), ATP binding / aminoacyl-tRNA ligase [Arabidopsis thaliana] (TAIR:AT5G49030.1); similar to predicted protein [Physcomitrella patens subsp. patens] (GB:EDQ69830.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74190.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69659.1); contains InterPro domain Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; (InterPro:IPR013155); contains InterPr Range:  from: 2128088    to: 2133145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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