Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         <---------AHL20(2)        <---------HSFB2a(2)                                                                      <---      --------->MYB52(1)    <---------LBD16                                                <---------GLK1(2)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        --------->AHL20(2)                          --------->ARR14(2) <--------P           --------->AHL20(2)       <---------AHL20(2)                          <---------ARR14(2) --------->GT1   <---------ANAC46         --------->AHL20(2)                            ------>ZmHOX2a(2) ------ANAC46   <---------LBD16           <---------AHL20(2)                           <------ZmHOX2a(2) ------LBD16  <----------DOF2            <---------AHL20(2)                           <xxxxxxxxxxxxxx -----LBD16  <---------HSFB2a(1)         --------->AHL20(2)                           <---------ARR14(2) --HSFB2a(1) --------->HSFC1(2)      <---------YAB1                             --------->ARR14(2) ->HSFB2a(1) --------->HSFB2a(1)--------->ARR14(2)                              <---------ARR14(2) ->HSFC1(2)  <---------HSFC1(2) <---------GLK1(2)                  <---------ANAC46   --------->ARR14(2) --HSFC1(2)<---------ARR11(3)   <---------ARR14(2)          --------->YAB1      <---------GLK1(2)----   cgggtaaataccagaactttcggataaaatttcggatttttgattaaatttaaattttcgaataaaaattcgggtatatttggattcggatcggattcga  2122300                                                 <--------P                                                <---------MYB52(1)                                                <-------GAMYB                                               --------->LBD16                                             <---------LBD16                                            ------>MYB83                                            ------>MYB46(1)                                            --------->MYB52(1)                                       <-----------GT1                                 --------->AHL20(1)                      <---------RVE1(1)             ---------->DOF2     <---------AHL20(1)                     --------->ARR11(3) ------ARR14(2)                  --------->AHL20(2)                     <---------GLK1(2) xxsmallRNA(i)                   <---------AHL20(2)            <---------At4g35610 ---------->DOF2 ----->ARR14(2)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ARR11(3)   attcgattttttggataaagaaatttagaagtcaataaaataaaccttccggttgatttaagttcagataattagattttttggataaagaaatttagaa  2122400                   <--------P                  <---------MYB52(1)                  <-------GAMYB                 --------->LBD16               <---------LBD16              --------->MYB52(1)              ------>MYB46(1)              ------>MYB83                     <---------MYB52(1)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)         <-----------GT1                      --------->LBD16   --------->AHL20(1)            <---------At4g35610   <---------AHL20(1)         <-------TEIL--------->ARR14(2)   <---------AHL20(2)     <---------TOE2(3) <---------LBD16                   <---------MYB52(1)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------ICU4                       ----------->GT1   --------->AHL20(2)     --------->MYB59 <---------ARR14(2)        --------->ICU4  --------->MYB59   gtcaataaaataaaccttccggttgatttaggttcagataatcagttccggttttttttggccaggcctactgatgaactgttattttggtaacttctaa  2122500                                                      <------ZmHOX2a(2)                                                     <-----------ARR10                                                     --------->AGP1                                                     <---------ARR14(2)                                        ----------->GT1------>ZmHOX2a(2)                                --------->TOE1(3)    --------->ARR14(2)                    <------ZmHOX2a(1)   <----------ID1--------->CCA1(2)       <-------GAMYB                 <---------ICU4 --------->TOE2(3)    <---------ARR11(3)      --------->MYB52(2)    --                 --------->YAB1 ----------->GT1     --------->RVE1(1)        <---------MYB46(3)  ----            ------>ZmHOX2a(1)  ----------->GT1   ---------->DOF2   <----------DOF2       <-----------GT1    --------->MYB52(1) ----------->GT1---------->DOF2--------->ARR11(3)  <---------MYB46(3)----------   atatcaaaacggtcctgaatcaggactgataaaacgttaaaaaagaaaaaaaaaagatctactcgtcttctttgtttgttcgttacagtttttacaaaaa  2122600        <----------DOF2                                                            *TSS   ----------- --------->RAV1(1)                                            <---------ETT(2)   ----------->TGA1 ----->DEAR3(2)                        ------------>CBF    <----------DOF2       ----------->HVH21 ->TBP  <---------DAG2    <-----------HVH21       --------->YAB1        --------->YAB1 --------->GLK1(2)   ccgacagacactttatctcaagagactgggtcaggcctctgttcaatctctatcaaaatccctttcgacatcattcataaacactgacgaatcagtgaaa  2122700                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                         <---------ICU4                                                   -----------                         <--------ATHB1                                                   --------->TGA1a                         --------->ATHB51                                                 <---------ANAC58                        --------->ICU4                                                    --------->O2                        <---------ATHB51                                                  ===========                        <---------ATHB12                                                  <---------ANAC58                      --------->YAB1                                                      <---------TGA1a                    ------>MYB83                                                          <---------ANAC46                 --------->MYB46(3)                               --------->GLK1(2)       <---------O2 --------->ARR11(3) ------>MYB46(1)                           --------->YAB1   <---------ANAC46<----- <---------ARR11(3)----------->RAV1(1)                     <-----------GT1     <---------ANAC58<----- >GT1       --------->LBD16                        --------->GLK1(2)           <---------ANAC58<-----   caatatctcaaacccagaaaccaacaataattcatagattactactatacaaaattctatataactataatctgttctcttgtgtgtttctcgcgtggct  2122800    <-----------GT1 --------ANAC58 --------ANAC55(2) --------ANAC58 --------ANAC46 ------->ANAC55(2) --------ANAC55(1)                                                 <----------DOF2 --->OsCBT                <---------At4g35610        --------->ANAC58 ================================bZIP_DOF            --------->ANAC58 ----ANAC58           <----------DOF2     ------->TEIL    <-----------HVH21       <---------CCA1(2) ----ANAC46     <---------ICU4    ------>ZmHOX2a(1) --------->WOX13(1)          <---------ALFIN1   <- ----ANAC58  --------->YAB1<---------GLK1(2)        --------->GLK1(1)  <-----------GT1     <---------GLK1(1)   tgcgtgttacttcattcatcactgctttagcttctcctcatatgaatctcgaggcaatccagtcactgacttttctcactccccatctctagggtttctc  2122900                      <---------AHL20(2)                  <---------AHL20(2)                 --------->AHL20(2)                 <---------AHL20(1)                                                <---------AHL20(2)                 <---------AHL20(2)                                               <---------YAB1             <---------AHL20(2)                                               <---------GLK1(2)     -             <---------YAB1  ------->TEIL                  <-------TEIL       --------->ARR11(3)-----          <---------AHL20(2)<---------GLK1(2)           <---------ANAC46      <---------ARR11(3)-----     <---------MYB52(1)--------->ATHB12            <---------ANAC46         ----------->ARR10   ----- ---------DOF2   --------->AHL20(1)             <----------DOF2      ---------->DOF2            -----   tctttcccttattttataatttatttcattgaatctctgaatttcattctcttttgtggagtacatttgtgtaaagcttagatttttatttgggtttcaa  2123000                            <---------DAG2                            <----------DOF2                        ------>ZmHOX2a(2)                       <---------GLK1(1)                       --------->GLK1(1)                      --------->ARR11(3)                      <---------AGP1                      <---------ARR11(3)                                                           --        ---------->DOF2<------ZmHOX2a(2)                                                   <--------- -------->MYB52(1)    <---------ARR14(2)                                                  <---------TOE2(3) ---->ANAC58          --------->ARR14(2)           <---------ARR11(3)           <---------ANAC46  <-- ---->ANAC46         <---------CCA1(2)       <---------HSFB2a(2)               <---------LBD16   <--- ---->AtLEC2        ----------->ARR10   <---------MYB46(3)         --------->ARR14(2)   <---------AHL20(2) ---->ANAC58    --------->ATHB12 <---------LBD16   --------->ARR11(3)   ----------------->AGL1   ----   gcaaaccgagaaaagaaacgattagatctcctttttctgggtttgttctcaaagatttgttctgtttcagttcttccaatttggggggattttatgttgg  2123100                                                        --------->TOE1(3)                                                        --------->TOE2(3)                                                        --------->YAB1                                                      ------->TEIL                                             --------->YAB1        ---------->DOF2                <---------ANAC55(2)                        <----------DOF2 ---->ZmHOX2a(2)                       --------->ANAC55(2) ---------->DOF2 <---------YAB1 --RAV1(1)    <-------TEIL      <---------ANAC58<---------ARR14(2)       <---------ICU4----------->GT1 ----ZmHOX2a(2)                 <---------ANAC58--------->ARR14(2)     <----------DOF2<---------TOE2(3) ------ARR14(2)                 --------->TOE2(3)    <---------CCA1(2)--------->YAB1  <---------TOE1(3) ----->ARR14(2)           ----------------------->TaNAC69(2)       <---------CCA1(2) <-----------RAV1(2)   atccagtctctaaaggttcgattttgatgtgtttccttgatatgtaatcagatttgaatcttaaagtttctatctttatgactcctttcaggttaaaact  2123200  Previous    Next  AGI:  At4g04340.1    Description:  early-responsive to dehydration protein-related / ERD protein-related. similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G22120.4); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G22120.5); similar to early-responsive to dehydration protein-related / ERD protein-related [Arabidopsis thaliana] (TAIR:AT4G22120.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO24038.1); similar to CM0545.360.nc [Lotus japonicus] (GB:BAF98597.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69661.1); contains Range:  from: 2122683    to: 2126842    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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