Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ANAC58                           --------->ANAC58     ---------->DOF2           <---------ATHB12             --------->ANAC58 -----ANAC58     --------->ANAC58     --------->GLK1(2)     --------->ANAC46 -----ANAC58     --------->ANAC46---------->DOF2        --------->YAB1       <----------DOF2 >TEIL--------->DAG2     <----------DOF2             ------>ZmHOX2a(1)  <---------At5g28300       <--   ttgttgcaaaagtgtctccaagccatactttcaatgaaagaatatggcaactctcctatcacaagcatctcattcactgcttctctgaaaaacattctca  2109300                                                          ====================================HOX2a_HOX2a                                                         <------ZmHOX2a(2)                                                         =====================================HOX2a_HOX2a                                                        --------->ARR14(2)                                                        --------->ARR11(3)                                                        <---------ARR14(2)                                                        <---------AGP1                            ----------->GT1             <---------ARR11(3)                          <---------ANAC58              <-----------ARR10                          <---------ANAC58             <---------CCA1(2)                       <----------DOF2              <---------LBD16                  --------->GLK1(1)        <---------WRKY18(1)                  <---------GLK1(1)       --------->WRKY12------>ZmHOX2a(2)                 --------->ARR14(2)       --------->WRKY38(1)<---------WRKY18(1)       ------>ZmHOX2a(1)                 <---------ARR14(2)     ----------------------->TaNAC69(2)            <---------ANAC58  <----------DOF2<---------ARR11(3)--------->ARR11(3)  <---------ARR14(1)    <----------DOF2 -------GLK1(2)  --------->ARR11(3)<-----------GT1<----------DOF2   <----------DOF2   <---------ANAC58   gaaacttttgtaacttgaagatttcctttcttgttaataacttgttgaccctctttcggatcttgaccatctttccatgctttgtattccttacaaatct  2109400                                                                                --------->ANAC55(2)                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                <---------ANAC55(2)                                                                               <---------LBD16                                                                             ----------->HVH21                                                                             <---------REM1(2)                                                                            <-----------HVH21                                                  ===================================bZIP_DOF                                                  <---------DAG2            <-----------TGA1                                             <---------At4g35610           --------->O2                                          ---------->DOF2                  <---------TGA1a                                          ===========================================bZIP_DOF                                      --------->CCA1(2)                    --------->TGA1a                                     <---------ARR14(2)                    ==========================                                     --------->ARR14(2)                    --------->ANAC46 ---------                               <-----------RAV1(1)<----------DOF2          <---------O2    <---------ATHB12  <---------YAB1         --------->LBD16<---------YAB1      --------->YAB1 --------->bZIP60(1)  <----   caagatgattccacaagtttttagtccctgaatttgttggatatgaaagctcctttttgcaatagtgacaattactctcgtcacggatgggcaatcgtct  2109500                                                                              --------->ALFIN1                                  <-----------ARR10                       <-----------RAV1(2)                                  <---------ARR11(3)                    <-----------HVH21                                  --------->ARR11(3)                    xxxxxxxxxxxxxxxx>smallRNA(i)                                  <---------ARR14(2)                  <---------At4g35610            <---------ALFIN1      --------->ARR14(2)                  --------->ZAT2                -     -------->HAHB4             --------->HSFC1(2)                    <---------ZAT2         <-------    --------->ICU4    ------>ZmHOX2a(2)                               --------->At4g35610    <-------    <---------ATHB12--------->ARR11(3)                          --------->GLK1(1)           <--------    <---------YAB1  <---------ARR11(3)                         --------->ARR14(2)        <----------DOF2 ======bZIP_DOF <---------At4g35610                            ------->TEIL <---------At4g35610   <-- >YAB1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   --------->GLK1(2)    <---------ANAC58- ------DOF2<---------REM1(2)    <---------HSFC1(2)             <---------ARR14(2)   <---------ANAC58-   tttgaaatgattctacacatctgatcttgagggaagtatcttcttaggcttagtttgttcagacgaatctccagcttcaggtgtttgcttccttttaccc  2109600                                                                     --------->YAB1                                                                    <---------YAB1                                                                    --------->ICU4                                                                  -------->HAHB4                                                         --------->At4g35610                                                         --------->ZAT2--------->ICU4                                          --------->RVE1(1)       --------->YAB1 -------->WRKY12                         --------->GLK1(2)       --------->ICU4 ----GT1  <-----------RAV1(2)            <---------ARR11(3)      <---------ATHB12 --At5g28300                         --------->YAB1      <---------ZAT2<---------YAB1 ---GT1  <---------ATHB12         --------->YAB1       <-----------RAV1(2)<---------YAB1            < --------DOF2<------ZmHOX2a(1)    <---------ICU4<---------MYB52(1)<---------ICU4      ----------->TBP -------->WRKY38(1) --------->ARR14(2)   --------->ARR11(3)      <---------YAB1       *TSS          - ---------->HVH21   <---------ARR14(2)  <---------GLK1(2)<---------At4g35610 ------->TEIL           -   ctttgacccaaatcaggagtcatatactcttcttcatcatcaaaatctctgttatcttcagctggtaatgatgatgatgaatccatctacaaataagaag  2109700                 --------->ARR11(3)             <---------ICU4            <---------YAB1            --------->ICU4     --------->AHL20(2)     --------->AHL20(1)     <---------AHL20(1)     <---------AHL20(2)                                            ---------->DOF2                  <  --------->YAB1 <---------ARR11(3)                              <-------TEIL                       - <---------YAB1<---------YAB1                          -------->HAHB4                               - <---------AHL20(2)                                    --------->YAB1                               < ---------AHL20(1)             <---------LBD16         <---------ICU4                              -- -------->AHL20(2)  <----------DOF2                   <---------ATHB12                             <- -------->AHL20(1)<---------YAB1                      --------->ICU4                      <---------ICU4   aatataataaattgattattatctttgttttctctcggataacattacaaagactaatgatcagagattcaaagtatcaaaaatacgaagaaacattaca  2109800                                                                                               ------      <---------TOE2(3)                              ----------->GT1                 --------->AHL20(2) ---------AHL20(2)                                   --------->TOE2(3)              --------->AHL20(2) -------->AHL20(2)                                  ----------->GT1   --------->ARR14(2)       ------ -------->AHL20(1)                       --------->ANAC58             <---------ARR14(2)       ------ ---------AHL20(1)                       ----------->GT1           --------->HSFB2a(2)    --------->DAG2 ------->AHL20(2)                        --------->ANAC58    --------->AHL20(2) --------------->AGL15 --------AHL20(2)                --------->YAB1 ---------->DOF2    <---------HSFB2a(2)   ---------->DOF2   aataaattaagaatactgatcagacacatatagaaacataaacaagttactaaagcgttaaaaaaaaatccagaacctatttccaaataaaaaaagcacg  2109900                                                                                                 ----                                                                                                <----                                                                                                -----                                                                                     <---------ICU4  --------->HSFC1(1)                               --------->ARR11(3)                --------->ATHB12  --------->HSFB2a(2)                              <---------ARR11(3)                -------->ATHB1  <---------HSFB2a(2)                             --------->CCA1(1)                  --------->ATHB51 --->ANAC58          --------->RAP2.6(3)   <-----------GT1                          <---------ATHB51 --->ANAC46    <---------ALFIN1         ----------->GT1                             --------->ICU4 --->ANAC58 --------->ANAC46        ------->TEIL  --------->RVE1(1)              ------------>ATHB5 -   acatctagaaacaaactccacatgaaggcataaacttgaatctagttacaaaatatctacttattctttcaaattatctacgttgaattattgccacaac  2110000                                                       --------->YAB1                                                       <--------HAHB4                                      <---------At4g35610  --------->ZAT18            --------->YAB1           <---------YAB1 --->GAMYB                  <---------YAB1   --------->ANAC58           --------->MYB52(1)       ---- -----MYB52(2)            --------->YAB1     --------->ANAC46           <---------ICU4           <--- ---->MYB46(3)           <---------ATHB12    --------->ANAC58  ---------->DOF2       ----------->RAV1(1) -------->ANAC46  ----------->GT1     --------->At4g35610<---------YAB1 --------->YAB1    <-------TEIL   aaactccactatgtgaaatacagtcaaatgataataagtcatctaacaagccatctattattagacaaagacaataacgacatctagcaacatacatata  2110100                    --------->ATHB12   <---------YAB1              <---------ATHB12       <---------ICU4                 --------->YAB1            --------->WOX13(1)       --------->YAB1               --------->ANAC58         --------->TOE2(3)        --------->WOX13(1)              --------->ANAC58 ----->AHL20(2)  <---------ANAC55(2)--------->ICU4                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------AHL20(2)  --------->ANAC55(2)<---------ATHB12       ---------->DOF2                  ---------   aaaatacagaacatcaatcaagtgattagacaaaaacaatcatgagacaaactatgtgtaacaaaggcaagcatataaacaattacagagactaaaaaga  2110200  Previous    Next  AGI:  At4g04316.1    Description:  transposable element gene. hAT-like transposase family (hobo/Ac/Tam3), has a 9.6e-40 P-value blast match to GB:AAD24567 transposase Tag2 (hAT-element) (Arabidopsis thaliana) Range:  from: 2106459    to: 2109686    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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