Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                            <---------TOE1(3)                -------->ATHB1                         ---------->DOF2                   <--------HAHB4                   ---------                        --------->AHL20(2)                 -------->HAHB4                  <---------MYB52(1)                     --------->YAB1                        <---------ICU4                --------->TOE2(3)                     --------->ATHB51                      --------->YAB1                ------->GAMYB                     <--------HAHB4                        --------->ATHB51            <---------At5g28300                     <--------ATHB1                        <---------AHL20(2)         --------->MYB52(1)                     -------->HAHB4                        --------->ATHB12           <-----------GT1                    <---------ATHB51                      --------->ICU4         --------->At5g28300                    --------->ICU4                        <---------ATHB51      ------->GAMYB                    --------->AHL20(2)                    <---------YAB1        --------->TOE2(3)                    <---------YAB1                      --------->YAB1          --------->TOE1(3)                  --------->YAB1<---------YAB1          <--------HAHB4          ----------->GT1       <---------At5g28300<---------TOE2(3)            <---------YAB1           --------->ANAC46      <-----------GT1<---------ICU4                  --------->YAB1          --------->ARR14(2)------ -----------MYB.PH3(1)  <---------AHL20(2)     ----------->GT1            --------->YAB1 --------->TOE1(3) ----->ARR14(2)  <---------AHL20(2)       <---------AHL20(1)          <---------AHL20(2) --------->ANAC46 ------ARR14(2) --------->AHL20(2)        --------->AHL20(2)   ----------->GT1 <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2) -->YAB1 ------->GAMYB <---------YAB1     <---------AHL20(2) <---------YAB1  <---------ARR14(2)------   aaccgttttaaccgtatatataataattaaagttatgtttacaaaaaatttgtaactataattattagttaataaatcgtaaccgtaataaccgtaacct  2029900                                                                   <-----------GT1                                                                  <-----------GT1                                                              <---------RVE1(1) >ARR14(2)<---------GLK1(2)                                   <---------CCA1(1)                     - --->TOE2(3)                                                 <---------ARR11(3)                     < --->TOE1(3)         ---------->DOF2                         --------->ARR11(3)                     -   tagtgatgcctaaattctctcattaaagcgtagataaaccggtgttaaaccatgaaaccatgagattttttccccctctcatttgtgaagttgattctaa  2030000               --------->ZAT6             --------->YAB1           --------->AHL20(1)                                                                      --           --------->AHL20(2)                                      <------ZmHOX2a(1)               --          --------->YAB1       --------->ICU4        <---------CCA1(1)                             --        --------->AHL20(2)    <---------YAB1         <---------RVE1(1)                         <-----   <---------TOE2(3)      ----------->GT1           <---------ARR11(3)          <----------ID1 <----- <---------AHL20(2)      --------->MYB59            <---------ARR14(2)     <---------YAB1     ------- -------->AHL20(1)       <---------TOE2(3)          --------->ARR11(3)    <---------AHL20(2)  ------- ---------AHL20(2) <---------ZAT14      --------->ALFIN1--------->YAB1    --------->AHL20(2)  ------- -------->AHL20(2) --------->ZAT14   <---------DEAR3(1)<---------YAB1  ----------->GT1        -------   aatttaatgaaaaaataatactacagtaaggtattaatgggggtggaatatgaagatattataagcttaggaatattaaaatagaacaagaacaaaacgt  2030100         ---------->DOF2      --------->ANAC58      --------->ANAC58 --------->ZAT14 ------->ANAC58 ------->ANAC58 ------->ANAC46                                <-----------ARR10               <---------ANAC55(2) ------TGA1                                 --------->MYB46(3)                 --------->ANAC55(2) ------HVH21                               ------>MYB46(1)                    <-------TEIL         -- -->ANAC46                          --------->ANAC58                <----------DOF2               <-- -->ANAC58       ==================================================================MADS_MADS--------- -->bZIP60(2)    <---------------AGL15     ------>MYB83            --------------->AGL15--------->LBD16 -->ANAC58 ----------->GT1          --------->ANAC58             ------>ZmHOX2a(1)<---------ICU4-----   cactccacaaggaaagttactaaaattgacaaaaccacaagtaccaacaaatctaagttttgtattcctcctttttaagttacataattccccaattcct  2030200                 <-------PIF5                 <-------MYC2                 <-------MYC3                 ------->PIF5                 ------->MYC3                 ------->MYC2                <---------O2                --------->TGA1a                --------->O2                <---------TGA1a                --------->ANAC46              <------------OsbHLH66             --------->DEAR3(1)            <------NtERF2           ------>NtERF2           <---------ATERF1(1)           --------->PCF2          --------->ANAC58        <---------ANAC55(2)        --------->ANAC58                                          ------->PIF5        --------->ANAC46                                          <-------MYC3        --------->ANAC55(2)                                       <-------PIF5        --------->ANAC58                   <---------ALFIN1       ------->MYC3      <-----------GT1                    --------->AtMYB61        ------->MYC2    <-----------HVH21                 --------->ANAC46            <-------MYC2   <---------CCA1(2)                  --------->ANAC58           --------->ANAC58 --------->AtMYB61                    --------->ANAC58           --------->ANAC46 --------->RAV1(1)      <-----------GT1 --------->MYB46(3)       --------->ANAC58 -------ALFIN1<---------ALFIN1 --------->ANAC46          <-----------GT1   <---------ICU4 >ARR14(2)--------->ANAC58  --------->ANAC46 <---------ALFIN1  <---------ALFIN1 <---------ANAC46 ->ZmHOX2a(1)--------->RAP2.3(3)    <---------MYB52(2)--------->YAB1  <----------DOF2         -------   ccaccatatcacgcgcccacgtgaattaaccagacaccacaaaccacacacattagttataacctccacgcgcttaatcagcgcgtataacaaatgaacg  2030300                            <---------HSFB2a(2)                            --------->HSFB2a(2)                     <---------GLK1(1)                                ------>ZmHOX2a(2)                 *TSS<---------CCA1(2)<---------ALFIN1               --------->GLK1(1)      <---------ANAC58<---------ARR11(3)                             <---------GLK1(1)        ------- >TEIL<---------ANAC58--------->ARR11(3)    <----------DOF2<<<<<<<<<TBF1               <---------ARR11(3)   tctctctagcgttgttcgttttgatatcttctcgacttctccacttctttagatttgattcttcttctctgatctctgaaaaaacacaatgtcttcgaaa  2030400                                                                 <---------AGP1                                                                <------MYB46(1)                                                                <------MYB83             --------->ANAC58                                  <---------AtMYB61             --------->ANAC46                               ------->GAMYB        <-----------HVH21                             ===========================HOX2a_HOX2a      --------->MYB46(3)                             <------ZmHOX2a(2)           ------>NtERF2      <------------AtMYB77                           ============================HOX2a_HOX2a      --------->DEAR3(2)                            <---------ARR14(2)           ----------->RAV1(1) --------->ANAC46                                   --------->ARR14(2)          ----------->HVH21 --------->ANAC58                   <---------ARR14(2)--------->YAB1      ----------->HVH21        -- --------->ANAC58                   --------->ARR14(2)------>ZmHOX2a(2)   ------>ZmHOX2a(1)   <------ --->DOF2    --------->ANAC58--------->ALFIN1 <----------DOF2 <---------MYB52(1)<---------ETT(1)   <-   gacaagaaaccgtcgaagccatcgagtagtcgtggtggaatccgaactctttccgatcttaaccgtaggtctggtcctgactccgacagtgattccgatg  2030500                                                                                                   --                    ----------->GT1                                           ------>ZmHOX2a(2)  <---                   --------->ALFIN1                                         <---------ARR14(2)   ----            --------->ZAT14                                                 --------->ARR14(2)   <---            <---------ZAT14---------->DOF2                               --------->ALFIN1    <-------      --------->YAB1<---------MYB46(3)                                 <---------ANAC46    --------->ATHB12 ------->ZAT18   <---------ZAT2<-----------HVH21                       <---------bZIP60(2)<---------YAB1 ---MYB52(1)<---------REM1(2)--------->DAG2                       --------->YAB1          --------->ICU4 --------ZAT18 <-----------RAV1(2)        <-----------GT1      --------->MYB52(1) <----------DOF2----   gtccacaagaatactacacaggtggtgagaaaaggtcagtcttgtttctatttcgcaagtgatactaatggtgatgtggatcgtcttttgctatgattgg  2030600       <---------AHL20(2)       --------->AHL20(2)                                                            <-------TEIL   --------->ARR11(3)                                                               <------ZmHOX2a(2)   <---------ARR11(3)                                                              --------->ARR14(2) ---->ZmHOX2a(2)                                                                   <---------ARR11(3) ------AGP1                                    --------->ATHB12                    --------->AGP1 ----->ARR14(2)                               <---------AHL20(2)                   --------->ARR11(3) ------ARR14(2)                       <---------AHL20(2)                   --------->MYB52(2) --WOX13(1)           <---------TOE1(3)       <---------YAB1             <---------MYB52(1)   ------- ----->ARR11(3)       <---------TOE2(3) <---------TOE2(3) <-----------RAV1(1)      <---------ARR14(2)   atctagatattaattgtgaggtttagggtttcatgtctaaataatgtttttattggtcttgtgttgcagtggtatgttagttcaagatccatcgaaaaaa  2030700                                                                          <---------HSFB2a(2)                                                                          --------->HSFB2a(2)                       --------->ANAC58                                   <-----------RAV1(2)                       --------->ANAC58                                   <---------LBD16                    <---------ATHB12                                  --------->GLK1(1)                 --------->AHL20(2)                             --------->DEAR3(1)                 <---------AHL20(2)                             --------->AtMYB61                --------->AHL20(2)                             <---------ZAT2             <---------CCA1(1)                                 --------->ZAT2                      <-             <---------RVE1(1)                   <------ZmHOX2a(1)  --------->LBD16      --------->ARR14(2)            <---------ARR11(3)         <---------At4g35610    ------>NtERF2--------->LBD16   --------            --------->ARR11(3)         --------->At4g35610    <---------ATERF1(1)        <---------ARR14(2) --->DOF2 ----------->ARR10          <------ZmHOX2a(1)       <---------ALFIN1<------ZmHOX2a(1) <-----   gatgatgttgatgagatatttaatcaagctagacaactaggagctgtagaaggacctcttgagccacctccgagttccaggagtttcactggaactggta  2030800  Previous    Next  AGI:  At4g04210.1    Description:  PUX4 (PLANT UBX DOMAIN-CONTAINING PROTEIN 4). similar to PUX3 (LANT UBX DOMAIN-CONTAINING PROTEIN 3) [Arabidopsis thaliana] (TAIR:AT4G22150.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74529.1); contains InterPro domain UBX (InterPro:IPR001012); contains InterPro domain SEP (InterPro:IPR012989) Range:  from: 2030317    to: 2031851    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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