Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              --------->MYB52(1)                         --------->YAB1                        <------ZmHOX2a(2)                       <---------ARR11(3)                       --------->ARR11(3)               --------->TOE2(3)<---------ICU4                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)------>MYB83       --------->YAB1         <----                 --------->ANAC58                     ------>MYB46(1)   <---------ATHB12        -----                 --------->ANAC58             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)            ------- ------>GT1 --------->At4g35610            <---------TOE2(3)            --------->ICU4    <xxxxxxxxxx ----TOE2(3)<---------At4g35610------->GAMYB----------->GT1 --------->ZAT6         ------>ZmHOX2a(1)   gtaagaacagcttgagcttaagcaagatcataacagcctcatactgaggtaaaaccagcctaaaactagtagaaatcatcacatcctcatggtgagggaa  1937400                               <---------------------WRI1                              ----------->GT1                             ------------------------>ANAC81                      --------->HSFB2a(2)                      <---------HSFB2a(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <-----------GT1 -----At4g35610      ----------------->AGL3       <-----------GT1<----------ID1     ----------->GT1 ---->At4g35610  --------->HSFB2a(1)--------->AHL20(2)    <-----------HVH21   <---------YAB1 -->ZAT18        <---------HSFB2a(1)<---------AHL20(2)  <---------DAG2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxsmallRNA(se3)---------->DOF2   ---------->DOF2<----------DOF2  <---------DAG2       <-----   ctgaagtataaacgaaggcatgttccaaaagaaggtaaaaaattcaaagaaattactacctttcagagagacaaaaccttttgatagagtgactagagga  1937500                                                                        --------->At4g35610                                                                        --------->ZAT14                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                      --------->ANAC46                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                                    --------->ANAC46      xxxxxxxxxxx                                                                 --------->ZAT18         --------->ANAC58                                                                 <---------ZAT14         --------->ANAC58                                                                 <---------ZAT18        <xxxxxxxxxxxx                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxx                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  ------>ZmHOX2a(2)                                            xxxxxxxxxxxxxxxx>smallRNA(i)<---------ZAT14 --------->DAG2                                           <------ZmHOX2a(1)     --------->ZAT14    ----------->GT1                                   --------->ANAC58          --------->ARR14(2)   <---------ARR11(3)                                   --------->ANAC58        --------->ANAC58       --------->ARR11(3)<                                  --------->TOE1(2)    --------->SPL7<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 ---------->DOF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxx      <---------ANAC46          <---------ATHB12 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  ---------->DOF2      --------->ALFIN1---------->DOF2     ----------->GT1  --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -ZmHOX2a(1)         --------->AtMYB61   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   tgagagaggtgtggaatagagaaccaaagctccaaacaagcgagaggaaatacttggtaccacgaactgcacacagcagtaatagatcgtaaagcaaaac  1937600                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                         --------->CCA1(2)                                         <------ZmHOX2a(2)                                        <---------ARR14(2)                                        --------->ARR11(3)                                        --------->AGP1                                        <---------ARR11(3)                                        --------->ARR14(2)                                        <---------AGP1                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                       <---------CCA1(2)                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                   ------>ZmHOX2a(2)                                xxxxxxxxxxxxxxxx>smallRNA(i)                               <xxxxxxxxxxxxxxxxsmallRNA(s)                              ==============HOX2a_HOX2a              ---------->DOF2 ------>ZmHOX2a(2)          --------->ZAT18    --------->CCA1(2)        <xxxxxxxxxxxxxxxxsmallRNA(s) ------>ZmHOX2a(1)        <---------ZAT18      <------ZmHOX2a(2)    <---------HSFB2a(2)      ===============HOX2a_HOX2a    --------->HSFB2a(2)     <---------AGP1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ------>ZmHOX2a(2)        <-----------ARR10  <------ZmHOX2a(2)         --------->ARR14(3)  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) <---------AGP1             <---------ARR14(3) --------->ARR11(3)         --------->AGP1------>ZmHOX2a(2) --------->AGP1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <---------ARR14(2)         --------->ARR14(2)    --------->AtMYB61 --------->ARR14(2)         <---------ARR11(3)  <---------ARR11(3)                          <xxxxxxxx <---------ARR11(3)         --------->ARR11(3)  --------->ARR11(3)                       xxxxxxxxxxxx xxxxxxxxxxx>smallRNA(si3)  <---------ARR14(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------At4g35610 xxxxsmallRNA(i)           <xxxxxxxxxxxxxxxxsmallRNA(i)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  < xxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                   --------->At4g35610 ---------CCA1(2)      <xxxxxxxxxxxxxxxxsmallRNA(i)     ------->GAMYB ---------->DOF2   <xxxxxxxxxxxx xxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <xxx   ccagatctagagggctcaaagcctgaacaagatctgatcctagatctgaagacctcaacagcaaaatcgagagaaaggagttggaagctccaacgagata  1937700                                                                              <---------ARR14(2)                                                                              --------->ARR14(2)                                                                           <---------ANAC46                                                                          <------NtERF2                                                                          <---------At4g35610                                                                          --------->ATERF1(1)                                                                          <---------LBD16                                                                         <---------RAP2.3(1)                                                                         <---------ORA47(2)                                                                         <---------DEAR4(2)                                                                         <---------ERF1                                                                         ------>NtERF2                                                                         <---------ATERF1(1)                                                                         <---------RAP2.6(1)                                                                         <---------RRTF1(1)                                                                        <---------ATERF1(2)                                                                        <---------DREB2C(2)                                                                        <---------DEAR3(1)                                                                        <---------RRTF1(3)                                                                        <---------RRTF1(2)                                                                        <---------RAP2.3(3)                                                                        --------->DEAR3(1)                                                                        <---------RAP2.6(2)                                                                        <---------RAP2.3(2)                --------->ALFIN1                                      <---------ATERF1(1)         --------->HSFB2a(2)                                         ================================         <---------HSFB2a(2)                                         --------->ANAC58      --------->ARR14(2)                                          --------->ZAT18      <---------PCF2                                              <---------ZAT14      <---------ARR14(2)                           --------->ARR11(3)--------->ANAC46     <------MYB83                                  <---------ARR14(2)--------->O2     <------MYB46(1)           <xxxxxxxxxxxxxxxxsmallRNA(i)     --------->ZAT14    <---------MYB46(3)         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->TGA1a    --------->MYB55(2)    <-----------RAV1(2)   <---------WRKY38(1)  --------->ANAC58   <--------P  <---------ARR14(2)             <-----------HVH21 <---------ZAT18   --------->ALFIN1   <------MYB83           ----------->GT1    --------->ZAT18  <xxxxxxxxxxxxxxxxxxx  <---------MYB52(1)  <------MYB46(1)    ------>MYB83        ==================bZIP_DOF xxxxxxxxsmallRNA(s) <---------AtMYB61   ------>MYB46(1)     ---------->DOF2  <---------GLK1(2)    -- xxxx>smallRNA(i)--------->ETT(1)        --------->MYB52(1) --------->ALFIN1 <------NtERF2   <------ZmHOX2a(1) -----------RAV1(1)<------NtERF2<------ZmHOX2a(1) <---------CCA1(2)  <---------TGA1a   xxxxxxxxxxxxxx xxxxxxxxxxsmallRNA(se3) <-------TEIL  --------->AtMYB61 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   ---- xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------MYB59  <---------LBD16<---------ABI4(1)   --------->ALFIN1   gtctggtgggtctggagggtcgggaggttcagaaggagagaccaaactggtcaaatcttgcggtagagcacacggcggcggattcggagaagggaggagc  1937800                                                                                                    -                                                                                  <---------MYB46(3)<                                                                                  <---------DEAR3(1)-                                                                                 --------->ALFIN1  --                                                                                <---------MYB52(1)---                                                                               <---------DEAR3(2) <xx                                                                              <---------ATERF1(2) <xx                                                                       --------->GLK1(2)       <-----                       --------->YAB1                                 --------->ARR11(3)       ------                     --------->ANAC58                                 <---------ARR14(2)       ------          --------->ATERF1(1)                                         --------->ARR14(2)       ------          <------ZmHOX2a(1)                                          <---------HSFB2a(1)       ------         --------->At4g35610                                         --------->HSFB2a(1)     --------       <-----------RAV1(2)                                           --------->HSFC1(2)   --------->ANAC58  --------->ALFIN1   --------->ANAC58                                <---------HSFC1(2)   --------->ANAC58 =======bZIP_DOF --------->ANAC58                                   ----------->ARR10 xxxxxxxxxxxxxxx xxxxsmallRNA(fl3)--------->ZAT2--------->ANAC58                  <------ZmHOX2a(1)  xxxxxxxxxxxxxxxx ------->DAG2    --------->ANAC58          ---------->DOF2  ---------->DOF2   <---------DEAR3(1)xxxxx xxxxxxxxx>smallRNA(si3)      ---------->DOF2         --------->ALFIN1<---------GLK1(2) <xxxxxxxxxxxx ------>DOF2 --------->ATERF1(1)--------->ANAC58     <------ZmHOX2a(1)<---------ARR11(3)<xxxxxxxxxxxx   aaaggtggagcaggagcccgagcaagcatcactaaagccatagaagaaaggaagaggagggagaaagaggaagattctcgccggtgggcgagaggccaca  1937900         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <------NtERF2     ------>NtERF2    --------->ATERF1(2)    <---------ATERF1(2)    <---------DEAR3(1)  ------->GAMYB --------->MYB46(3) ----->MYB83 xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ----->MYB46(1) ------->MYB52(1) ------>AtMYB61 xxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) ----ALFIN1 --->ANAC58 --->REM1(1)                                                                                     <--- --->ANAC46                                                                    --------->YAB1    ---- --->ANAC58                                                                <---------DAG2      <----- --->RAV1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          <----------DOF2     <----- xxxxxxxx>smallRNA(fl3)                                                   <---------DAG2  <---------TOE2(3) >smallRNA(s)    >>>>>>>>>TBF1                                <---------WOX13(1)          ----------- xxxxxxxxxxxxxxxxx>smallRNA(si3)                             <------------CBF <---------YAB1   ------ xxxxxxxxxxxsmallRNA(le3)                        --------->DAG2  <---------TOE2(3)       <-----------GT1 xxxxxxsmallRNA(se3)    --------->TOE2(3)       ---------->DOF2----------->HVH21    --------->ICU4<--   ccaacggcggcaaggagaagaagaaaccctagtcgtcaagttgagagagaaaaaggggttttggattgacgatgtcccttttcatagttattaacaatat  1938000    <---------TOE2(3)   <-----------GT1  <-----------GT1                                                       <------------CBF ------AHL20(1)                                          --------->ANAC58            <----------DOF2 ----->AHL20(1)                                          --------->ANAC58           <---------ANAC58 ----AHL20(1)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----ARR11(3)                                   <---------WOX13(1)     --------->ATHB12          <--- ->CBF   <---------AHL20(2)                    <------------CBF       <---------YAB1<---------ANAC58 --->AHL20(1)                                 --------->ATHB12 ------------>CBF  <---------WOX13(1) -------AHL20(2)      <-----------GT1       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<------------CBF <---   atatttaacatttttttgctcgatttacattcactcagtttttgacaaagattgatgcaacgcctaacaattttcattgctagattgcttttgaaatttg  1938100                          ------>MYB83                 --------->MYB46(3)                ------>MYB46(1)                ------>MYB83               --------->MYB52(1)              --------->MYB46(3)   --------->ATHB12        --------->YAB1    ------>MYB46(1)       <---------YAB1   <---------MYB59     --------->YAB1     --------->MYB46(3)     <---------ICU4     <---------MYB111(1)                                                  <-------    --------->ICU4      <---------MYB46(2)                                --------->ATHB12   --------    <---------YAB1      <---------MYB111(2)  <---------YAB1              <---------YAB1      -------- ------ANAC58 --------->AtMYB61   <---------YAB1                       --------->YAB1        <------- ------ANAC58--------->MYB46(3) --------->YAB1                 --------->AHL20(2)   <---------YAB1   ctcgttattattatcaccaacggctaccaaacaaacatgatttagtcattgttgttatcgataaataaaacaaacatgatttagtcattgttgtcagctt  1938200                                                                    --------->ARR11(3)                                                                    --------->ARR14(3)                                                                    <---------ARR14(3)                                                                    <---------ARR14(2)                                                                    <---------ARR11(3)                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                     --------->ANAC58                                        <---------------AtSPL8      --------->ARR14(2)                                       --------->DAG2--------->ANAC58 ------>ZmHOX2a(2)                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <---------AtLEC2     --------->LBD16         <xxxxxxxxxxxxxxxxsmallRNA(s) --ZAT2                   --------->LBD16   <---------ZAT14         <---------AGP1   <---------ZAT14 ->At4g35610            ------>ZmHOX2a(2)   <-------TEIL---------->DOF2   <---------AtLEC2        --- ->ZAT2    ---------->DOF2<---------LBD16   --------->ZAT14     ---------->DOF2      --------->ZAT14 --At4g35610       <---------WOX13(1)---------->DOF2<---------TOE1(2)<------ZmHOX2a(2)          -----   caaaatttgcatcaaaaggagattgatccccggtctctgaaaagggtacagtcgcaagttaagcgagaaagatctcgcatggtccagtactctaacaaaa  1938300  Previous    Next  AGI:  At4g04030.1    Description:  ATOFP9/OFP9 (Arabidopsis thaliana ovate family protein 9). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G54730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40868.1); contains InterPro domain Protein of unknown function DUF623, plant (InterPro:IPR006458) Range:  from: 1934065    to: 1937829    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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