Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        ------>ZmHOX2a(1)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    ----------->GT1         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) --------->AHL20(2)    <---------ANAC55(2)    <------MYB83--------->MYB52(1)   <---------WOX13(1) -------ZAT18              <------MYB46(1)                --------->ATHB12 ------>ZAT18             --------->MYB59                <---------YAB1 <----------ID1 ---ICU4       xxxxxxxxxxxxxxxx>smallRNA(i)      --------->GLK1(2)<---------AHL20(2)                -   tgcaaaacgtgaatagttcatcaaaaatttggtcattgtcctaacgcagacaatcttgtctgattgattttatagggactaaacatacaatatcgaaatt  1887100                                                                                               ------                                                                                              -------                          <---------------AGL15                 --------->ZAT6            ------->GAMYB                          ----------------->AG                  <-----------GT1          --------->MYB46(3)                          --------------->AGL15       <---------AHL20(2)            <-----------HVH21                   --------->ARR11(3)                --------->AHL20(2)         --------->GLK1(2)                   <-----------ARR10                 <---------AHL20(2)        <---------GLK1(1)                   <---------ARR11(3)            <---------AHL20(2) <---------ARR11(3) --------->WOX13(1)         <-----------GT1 <-----------------AGL1  --------->AHL20(2) --------->ARR11(3)<---------ETT(2) --------->DOF2   <---------CCA1(2)       ----------->GT1      <---------YAB1  --------->GLK1(1)    <   gaaaaagaatttttcgacacaaatctttcccaaaattgtatatgtagataatttataaatttgttatcactatcttctaagaaatctgtcaaccaaaaaa  1887200                           <---------AHL20(2)                       --------->AHL20(2)                       <---------AHL20(2)                 <---------ANAC46                 <---------ANAC58                 <---------ANAC58                ---------->ID1           --------->ARR11(3)                                               ----------->GT1    <-----           <---------ARR11(3)               --------->YAB1        --------->ATHB12             ------ --->DAG2  --------->GLK1(2)             --------->YAB1          xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) - --->DOF2 --------->RVE1(1)--------->AHL20(2)        ----------->GT1<---------WOX13(1)        ------- ---------YAB1<-----------RAV1(1)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  <----------DOF2      <------   gtatgatataaaaaatctgtcgtatttaaaaaattctactgaataagaataaatctggtataactaaatgatagacttttgtaaaatcgctagaaatttt  1887300                                                                                                    -                                                                                                    <                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                -----                                                                                              -------                        <---------YAB1                                       <---------ARR11(3) -----       --------->ARR11(3)                    --------->AHL20(1)              --------->AHL20(1) <----       --------->AHL20(1)    <-----------GT1 --------->AHL20(2)              <---------AHL20(1) <----       <---------AHL20(1)   <-----------GT1  <---------AHL20(1)              --------->AHL20(2) <---- ----AHL20(2)        --------->AHL20(2)    --------->ARR11(3)      --------->AHL20(2)        <------- --->AHL20(2)        <---------AHL20(2)    --------->AHL20(1)      <---------AHL20(2)  --------->AHL20(1) --------->DOF2      <---------AHL20(1)    <---------ARR11(3)     <---------AHL20(1)   <---------ARR11(3) -->AHL20(2)     --------->AHL20(2)        <---------AHL20(1)     --------->AHL20(2)   --------->ARR11(3) ---AHL20(2)     <---------AHL20(2)     --------->AHL20(2)        <---------AHL20(2)   <---------AHL20(1)   tttaaagaatattttgtatttattttatttttaacacatgaaaaaaatattttaaacaaaaaaaacaatttaattccaatattttagaaaatattctaat  1887400 -------->AHL20(2) ---------AHL20(2) -----ATHB1 ----->YAB1 ---->HAHB4 ------ICU4                                                          --------->ANAC46 -----HAHB4                                               <-------MYC2 ----->ATHB51                       <---------ANAC58      ------->MYC2 ---->ICU4                          <---------ANAC55(1)   <-------MYC3 -->YAB1                            --------->ANAC55(2)   ------->MYC3 ---->AHL20(2)                      <---------ANAC46      <-------MYC4 -----ATHB12                        <---------ANAC58      <-------PIF5 -----ATHB51                        <---------ANAC55(2)   ------->PIF5 -----YAB1 --------->ANAC55(2)    <-----------GT1        --------->ANAC58 --YAB1    <---------ANAC55(2)--------->AHL20(1)         --------->ANAC58   aattaatctcattacttaagttaacccctaaatatgttacgttttaaaactatctaagcacgttctaatacacatcatacatcatacagaaacacatata  1887500                                                              <---------GLK1(1)                          *TSS                               --------->ARR14(2)                  --------->ARR14(2)                         <---------ARR14(2)               <---------ANAC55(2)                        <---------HSFB2a(2)               --------->ANAC55(2)                        --------->HSFB2a(2)              <---------LBD16                      --------->KAN4(2)          ----------->HVH21                       <---------HSFB2a(1)                      <---------ARR14(2)        ----------->GT1  ------>ZmHOX2a(2)        <---------KAN4(1)            --------->ANAC46   <---------ANAC58    --------->ARR11(3)         --------->KAN4(1) --------->AHL20(2)     ------->TEIL   <---------ANAC58    <---------ARR11(3)         --------->HSFB2a(1)         --------->LBD16 ------>ZmHOX2a(1)<---------ARR14(2)   <---------ZAT14   <---------LBD16 --------->KAN4(2) --------->ARR14(2) ===============================HOX2a_HOX2a      <---------KAN4(2)<----------DOF2         <---------CCA1(2)   ttcctccgtgctgtaacacgggtctgatcttagtaaaatagtggagagaagaatattcttctggataccttttaatattccccaaaacttctgaatcttc  1887600                                                                                         <------NtERF2                                                                                         <-----------                                                                                        ------>NtERF2                                                                                        <---------ATERF1(1)                                                    ---------->ID1                      --------->LBD16                                              <---------DAG2                           <---------DEAR3(1)                                              <----------DOF2                          --------->ATERF1(2)                                            <---------------AGL15      <---------bZIP60(1)                                            --------------->AGL15      --------->bZIP60(1)                                           <-----------------AGL3   ----------->TGA1   --------->DEAR3(1)           --------->ETT(2)                <-----------------AGL2 --------->YAB1       <---------ATERF1(2)          --------->HSFB2a(2)              ----------------->AG   <---------ICU4      --------->ATERF1(1)          <---------HSFB2a(2)           <----------DOF2          <---------ATHB12     <---------LBD16       <-----------GT1     ---------->DOF2 <-----------------AGL1--------->ICU4      <---------RAP2.3(1)   ttctcaatttttctcgacattttctcatcgaaagctctcttcctttccctttttggcgctcaatacaatcatgacgttagagagttacgccggcgatgtt  1887700                                                 <---------DAG2                                                 <----------DOF2                                           <------NtERF2                                          <---------DEAR3(2)                                          <---------MYB46(3)                                         <---------DEAR3(1)                                         <---------ANAC46                                        <------NtERF2                                        --------->ATERF1(1)                                        <---------ABI4(1)                                       <---------RAP2.3(1)                                       ------>NtERF2 <---------ANAC58                                       <---------ATERF1(1)                                       <---------ERF1<---------ANAC58                                       <---------ORA47(2)                                       <---------RRTF1(1)                                       <---------DEAR4(2)                                      --------->ATERF1(2)                                      <---------RAP2.6(2)                                      <---------RAP2.3(2)      ----------------->AGL1          --------->ALFIN1     --------->SPL7                   <---------RAP2.3(3)                                         <--   <---------SPL7                     <---------ATERF1(2)                                       <----   --------->At5g28300                <---------DREB2C(2)                                       <---- --------->ANAC58                     <---------RRTF1(2)                                   <---------HSFC1(2) --------->ANAC58                     <---------DEAR3(1)                                   --------->HSFC1(2) --------------->AtSPL8               <---------RRTF1(3)                                   --------->HSFB2a(1) --------->ANAC55(1)                 <---------ABI4(1)     ------>NtERF2                   <---------HSFB2a(1) --------->ANAC46                    --------->ATERF1(1)  <---------ALFIN1         <---------ATHB51 ----------WRI1               <------ZmHOX2a(1)<---------At4g35610          <---------AtMYB61<-------   cacacggtaccacaatcggagaactcgatggaggagagaggcggcggtgagcttttcgtgccacctcttaacttcgctatggtcgataatggaattttcc  1887800                    --------->MYB52(2)                  <---------MYB52(1)          ------>ZmHOX2a(1)                                                                         <        ----------->RAV1(2)  <----------DOF2<---------ANAC58                                       <-   ----------------------->TaNAC69(2)       <---------ANAC58                                       <- -------MYB52(1) <-----------HVH21          <---------ANAC46<---------ANAC55(2)                   --- -----ANAC58    --------->ANAC46        <----------DOF2     --------->ANAC55(2)             ------>ZmHOX2a(1) -----ANAC58 ------->TEIL  --------->At4g35610              ----------->GT1                 <-------- ----GT1<---------LBD16    <---------At4g35610         --------->WOX13(1)                  --------->TOE2(3)   gttctggttttcctgaacccgtcagtttcagctttctccagtctttgcgtctcaaatccatcatgtaatttctcttaatctcattctcttagtccttaat  1887900          ---------->ID1       <-------TEIL                                         -------->HAHB4    --------->ZAT2                                          <---------ICU4    <---------ZAT2                                          --------->YAB1    --------->At4g35610                                    <---------YAB1    <---------At4g35610                                  --------->YAB1  <---------WRKY12                                      --------->AHL20(2) -----------HVH21                                       <---------AHL20(2) -----MYB46(1)       ----------->GT1                    <---------YAB1 -----MYB83 <---------SPL7                            --------->CCA1(2) ------>MYB59     <---------CCA1(2)                  <---------ARR11(3)                             - -------AGL15   ------>ZmHOX2a(1)                    --------->ARR11(3)                      --------   taggtcagcttcgtcgtcctgtatcgcaaatagtcgctgatttagttgatatggagatataattatagctagggttttatagaatgtttctgttatagtg  1888000  Previous    Next  AGI:  At4g03960.1    Description:  tyrosine specific protein phosphatase family protein. similar to tyrosine specific protein phosphatase family protein [Arabidopsis thaliana] (TAIR:AT1G05000.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24065.1); contains InterPro domain Protein-tyrosine phosphatase, SIW14-like (InterPro:IPR004861); contains InterPro domain Protein-tyrosine phosphatase; (InterPro:IPR000387) Range:  from: 1887526    to: 1889209    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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