Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            <---------ANAC58                                                                          <---------ANAC46                                                                   <---------------AGL15                                                                   <---------DAG2                                                                   <----------DOF2                                             <---------ICU4        --------------->AGL15                      --------->YAB1         --------->ATHB12     <---------ANAC58                      --------->TOE2(3)     <---------YAB1        <---------ANAC58                    -------->P              --------->ICU4 --------->ARR11(3) -------DOF2   --------->ZAT6          <-----------GT1 ---------->DOF2    <---------ANAC58  <-------- -----DAG2<----------DOF2----------->GT1  --------->YAB1   <---------ARR11(3)               ---------   ttttattgatgtctttaagactaaccatagtaaaaatagattaaccatgattaaaactaaagacatttgcttttttgggtgtctaaaatgtcttagggaa  1611400                                          <---------TOE2(3)                                          <---------YAB1                              <---------AHL20(2)                            <----------DOF2                                                      <---                         <---------ARR11(3)                                           <------MYB46(1)                         --------->ARR11(3)  <--------P                               <------MYB83                  ----------->GT1    <-----------GT1                   <---------ARR14(2)     ------- -HSFB2a(2)      --------->DAG2   --------->YAB1              --------->ANAC46       <---------AtMYB61 >HSFB2a(2)    ---------->DOF2--------->AHL20(2)   <----------DOF2     --------->ARR14(2)     <------   gacatatttgacatcaaaaaaggtgaatgtctttaattttaactatggttagtctttaaaacacacactagaagttatgcaatagggatggtctaagttc  1611500                                                                                             <-------          <----------DOF2                                                                  <---------YAB1          --------->TOE2(3)                                                           --------->ANAC46    <------MYB83                                                                   --------->ARR14(2)    <------MYB46(1)                                                                <---------ARR14(2) -------DOF2                                                                 --------->LBD16 -------- -->ARR11(3)                             <---------MYB52(1)                 --------->HSFB2a(2) ---ARR11(3)                   <---------ICU4                               --------->ANAC46---------   tttgctaggttactttaattcttggatttttgaacattgctctgtttttttttttagtcaaacaacattgctctgtttccgaaacaatccgctatgatat  1611600                                 --------->ATHB12                                  --------->ZAT18                             <---------ATHB12                             <---------RVE1(1)                    ------>ZmHOX2a(1)                                    <---------ARR11(3)                   --------->TOE1(2)                                     --------->ARR11(3)                  ------>ZmHOX2a(2)                         <------------CBF       <----------------- --ARR11(3)      <---------YAB1 <---------YAB1    <------------CBF       <---------GLK1(2)         -- ->ARR11(3)     --------->ARR11(3)            --------->ANAC58         <---------TOE2(2)   <------ZmHOX2a(1) >YAB1          <---------ARR11(3)            --------->ANAC58         <---------TOE1(2)   ==========   tggcctaatgtattgtatgatcctaggcccaatgcttattgggccagtaagcaattggcacaaattgtattcgtagattttttagtgcgatgaggactag  1611700                                                                                 <-------GAMYB                                                                              ------>NtERF2                            --------->ARR14(2)                             --------->At4g35610                            <---------GLK1(2)                              ------>ZmHOX2a(1)                        <-----------GT1                                --------->ARR11(3)                       <-----------GT1                                 <---------ARR14(2)             ------>ZmHOX2a(2)                                         --------->ARR14(2)            --------->At4g35610                                     --------->SPL7   ---------->DOF2           --------->ARR11(3)                     *TSS ========================HOX2a_HOX2a ----WRI1  <---------ARR11(3)               <---------ANAC58      <---------SPL7<---------ANAC46 --------->GT1   ------------>CBF           <---------ANAC58    <---------------AtSPL3             <- ===================HOX2a_HOX2a  ----------->RAV1(1)   ------>ZmHOX2a(1)<------ZmHOX2a(2)          --   atagtaaacttgtgatctcaacaattttccgattcccacagaaatggcttccttctcctcttcgtcgcagtacgatcctctgccgttgaaagacggagag  1611800                        <------NtERF2                       --------->LBD16              <---------ZAT2              --------->HSFC1(2)              --------->ZAT2              <---------HSFC1(2)              <---------HSFB2a(1)              --------->At4g35610              <---------At4g35610              --------->HSFB2a(1)             --------->ARR14(2)             <---------ARR14(2) <---------ARR11(3)             <-----------ARR10  --------->ARR11(3)                                               ----            <------NtERF2  <---------MYB52(2)                     --------->ARR11(3)            <----          <---------DEAR3(1) --------->MYB52(1)            --------->ATHB12                    <-----   --------->GLK1(2)  --------->RAP2.6(2)              --------->At4g35610                     ------  <---------GLK1(2)  <---------LBD16                   --------->ZAT2                          ------ --------HSFB2a(2)  --------->LBD16                    <---------ZAT2                          <----- ------->HSFB2a(2)  ------>NtERF2      <---------GLK1(2)  <---------YAB1                       <-----   tccagaaactgggcggagcttccgccggaactaacatcttcgattcttctccatctcagcacgattgagatactgagaaacgctcaaattgtatgcagat  1611900      ------>NtERF2     <---------O2     --------->O2    <------NtERF2                                                                                  --    --------->ATERF1(1)                                                                          ----   <---------ATERF1(1)                                                                           <---   ------>NtERF2                                                                               ------  <---------DEAR3(1)                                                                     --------->ANAC58  ----------->HVH21                                                                      --------->ANAC46  <---------RAP2.3(3)                                            <---------MYB46(3)      --------->ANAC58 <------NtERF2                    <------NtERF2              --------->ATHB12          <---------ALFIN1 -->ZmHOX2a(2)                  <---------ANAC46            <---------HSFB2a(1)       ----------->HVH21 --ZmHOX2a(2)               <-------MYC3                   --------->GLK1(2)          <---------MYB52(1) ------ARR10                ------->MYC3                  <---------GLK1(2)         --------->ANAC46 --->ARR11(3)              <-----------RAV1(1)          ------->GAMYB       --------->ANAC46  <------ --->ARR14(2)              --------->O2                --------->ANAC58     --------->ANAC58 <-------GAMYB ----ARR11(3)              <---------O2                --------->ANAC58     --------->ANAC58 -------- ----ARR14(2) ---------->DOF2--------->ALFIN1        --------->MYB52(1)--------->ZAT6<-----------HVH21   cgtggcgacgcgtctgcaaagacccatccatgtggcgcaaaatcgacatgagaaacaacggaatctttggttacgactacgacagtccgtcacgccgttg  1612000          --------->ALFIN1       <---------AtMYB61   --------->At4g35610   <---------At4g35610                          <---------GLK1(2) ---->ZmHOX2a(2)                         --------->HSFB2a(2) ----->ARR11(3)                    <---------ALFIN1                                      --------->TOE2(3) ------ARR11(3)                   <---------ZAT14                                    --------------->AGL15 --->WRKY12<---------MYB46(3)     --------->ZAT18               --------->REM1(1) <-----------GT1 ---MYB52(1)                      <---------ZAT18--------->GLK1(2) --------->DEAR3(1)<---------------AGL15 ------------->WRI1          --------------------->WRI1       ------>ZmHOX2a(1)--------->MYB52(2)   atctcagcgaaggtggtttagtcgaaatcaacatggtacacttcggcaacgattctctctactcctacatcgcccaaaggtttgtttctattcttagaat  1612100              <---------ZAT14     <---------MYB46(3)                          --------->ARR14(2)     <------MYB83                               <------ZmHOX2a(1)     --------->MYB52(2)                         --------->ATHB12     <------MYB46(1)                       <-----------GT1                                  <--------    <---------AtMYB61                    <---------YAB1                                     <--------   <--------P --------->ZAT14        <---------GLK1(2)                                  ---------->DOF2  <-------GAMYB   <----------DOF2<------ZmHOX2a(2)                                   <-----------GT1 <---------MYB46(3)              ======================HOX2a_HOX2a                 --------->AHL20(2)   ttttggttggtttcagtaaactttctagggtttagatcagattattaacaggattggagaaggaattgggcgaattagggcaaaatttaacaaagcttgt  1612200                      <---------ANAC58                                                     <---------ZAT14              <---------GLK1(1) <---------ANAC58                                           <---------ZAT18       <-----------GT1<---------ANAC58                                              --------->DAG2  <---------YAB1<-----------RAV1(1)        --------->AtLEC2                    <---------YAB1  <----- -ANAC58     --------->ARR14(2) <---------ANAC46                       <-----------RAV1(1) --------->ZAT14 -ANAC58     <---------ARR14(2) <---------ANAC58                    ------->TEIL   ---------->DOF2 <-   ggtttttattaactggatatgttgccttgggattgtgtgaaggccttgcaagttagaggtcatgttgttgaatctgtggttttgataaagcagtgttctc  1612300  Previous    Next  AGI:  At4g03635.1    Description:  similar to F-box family protein (FBL21) [Arabidopsis thaliana] (TAIR:AT4G05470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82327.1); contains domain PTHR23125:SF23 (PTHR23125:SF23); contains domain PTHR23125 (PTHR23125); contains domain G3DSA:3.80.10.10 (G3DSA:3.80.10.10) Range:  from: 1611750    to: 1612754    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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