Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         --------->AHL20(2)                                                                                     ----------->GT1                                                                                <--------HAHB4                                                                                <--------ATHB1                                                                                -------->HAHB4                                                                                --------->ATHB51                                                                                --------->YAB1                                                                                <---------ICU4                                                                               <---------ATHB51                                                                               --------->ICU4       <                                                         <------------CBF      <---------YAB1--------                                                <------------CBF    <------------CBF <---------ANAC55(2)                                              <---------YAB1      <---------ZAT14  --------->AHL20(2)                                            ----------->GT1       --------->ZAT14  <---------AHL20(2)       <---------YAB1                       --------->YAB1   <---------YAB1    --------->AHL20(2)   <      *TSS         <------MYB83    --------->ICU4        <---------GLK1(2)   --------->YAB1  <------- -AHL20(2)         <------MYB46(1)--------->ARR11(3)   --------->ICU4       <---------AHL20(2)   ----   ttgtgaaatatgaaaaacatttggtcgaatttgtgagataatgaaatggtaattggaaagattgtgactgcattgtttttaataattaagtaaatttaaa  1604600                                                       --------->YAB1      --------->ARR11(3)                                                       --------->TOE1(3)   <---------GLK1(2)                                                       --------->TOE2(3)   <---------ARR11(3) <---------LBD16           ----------->GT1       <---------ANAC58        <---------TOE1(3) ---------ANAC46 <---------ATHB12                <---------ANAC58        <---------TOE2(3) ->AHL20(2)   --------->AHL20(2)             <---------ARR11(3)  --------->AHL20(2) -----------RAV1(1)       ----------->GT1    --------->ARR11(3)  <---------AHL20(2) --AHL20(2)  --------->AHL20(2)          ---------->DOF2  --------->MYB52(1) ----->GLK1(2)<---------AHL20(2)    ---------->DOF2   <---------YAB1  --------->AHL20(2)   ----------   ttctgtggaagtatatttaatcaataaactggaaaaacaaaagaaaagatttcgttaccataacgatttaaatttaagattttgttatacagaaaaagaa  1604700                                                                     --------->ARR14(2)                                                                 <---------MYB52(1)                                                                --------->LBD16  --------->ANAC58                                                              <---------LBD16<---------ANAC46            <-----------GT1                                 <---------ARR14(2)   --------->ANAC58       <---------RVE1(1)                                    --------->ARR14(2) <--------P       <---------CCA1(1)                                    --------->GLK1(2)----------->GT1      --------->ARR11(3)                                <-----------GT1 <-----------RAV1(1)      <---------ARR11(3)             --------->YAB1     --------->YAB1<---------GLK1(1)        <----- >DOF2<---------GLK1(2)  <------ZmHOX2a(1)         --------->AHL20(2)<---------ARR14(2)     <--------   atgtagaagatttttttctaatttagaggagtcaaacaatgatatataacaaaaaaaatcacaatccggtggatttgtggggtaagtcattaatctttta  1604800                                                                                      --------->YAB1                                                                                      --------->TOE2(3)                                                                                    <---------TOE2(3)                                   --------->ZAT6                                 <---------AHL20(2)                                  <---------YAB1                              <---------RVE1(1)                                <---------ICU4                                <---------CCA1(1)                               <---------YAB1                                --------->ARR11(3)                               --------->ICU4                              ----------->ARR10                             --------->YAB1                             <---------ANAC58                            <---------YAB1                         --------->MYB52(1)<---------YAB1   <---------YAB1     ------------>CBF  ----------->TBP       ---------->DOF2<---------ARR11(3)     < ------GT1  --------->ICU4 --------->ARR11(3)         ---------->DOF2   <---------ANAC46     -------- --DOF2 ----------->GT1    <---------ARR11(3)      <-----------HVH21    <---------ANAC58    <--------   ctattttgtttggaaaaattagtagtcaatatcattatgactacatatatcagtgtcaaagactcaaagtaatggcttagatattttatgttaataaaag  1604900  ----------->TBP  --------->AHL20(2)                                                            <---------MYB52(1) --------->ARR11(3)                                                      ---------->DOF2--------->YAB1 <---------AHL20(1)                                                     --------->CCA1(2) <---------ARR11(3)                                                    --------->ARR11(3)      <----- -----------TBP  <----------ID1                 --------->TOE2(3)      <---------ARR11(3)    -------- -->DOF2 ----------->GT1                    <---------AHL20(2)     ---------->DOF2      --------->WOX13(1) -AHL20(2)     ---------->DOF2        ------>ZmHOX2a(2)   ------------>CBF    <---------MYB46(3)   gaatatatatactgtgaaaaagacaagtttgtgtaagggatcgcatataatctcaactaatacaataaacaaagatatagccgttggcattaatcagctt  1605000                      <---------ARR14(2)                                                           --                      --------->ARR14(2)                                                           --                      <---------ARR11(3)                                                           <-                      --------->GLK1(2)                                                            <-                 <------ZmHOX2a(2)                                                         <---------ZAT2        --------->MYB52(1)                                 <---------------AtSPL3          --------->ZAT2        ------>MYB83  --------->ARR11(3)                <---------YAB1        <---------ANAC58  -----        -------->P   <---------GLK1(2)                  --------->ICU4        <---------ANAC46 <-----        ------>MYB46(1)                               --------->YAB1          <---------ANAC58<------      --------->MYB46(3)                             --------->ICU4        <----------DOF2 --------->ATERF1(1)      --------->AtMYB61                              <---------YAB1       ------>ZmHOX2a(2)<---------At4g35610 -----DOF2      <---------ARR11(3)            --------->WOX13(1)        <---------ARR11(3) --------->At4g35610 ->At4g35610    --------->ARR11(3)         --------->GLK1(2)            --------->ARR11(3)<---------ATERF1(1)   tggctagaccaaccagaagatcagaatcttgagaagatggagaagaatcaatctgatgatgatggaacggctctgatctttcttggaacaggctgctccg  1605100                                        ------>ZmHOX2a(1)                                      ------>ZmHOX2a(2)                                     <------ZmHOX2a(2)                                    --------->ARR14(2)                                    <---------ARR14(2)                                    --------->ARR11(3)                                    <---------ARR11(3)                                <------NtERF2                                <---------MYB52(1)       --------->LBD16         <-----------HVH21      --------->HSFB2a(2)      <---------RAP2.6(3)   --------->ARR14(2)         --------->RAP2.3(3)   <---------ARR14(2)         --------->ATERF1(2)  <---------At4g35610         --------->RAP2.3(2)                                        --------->TOE1(3) ------->ABI4(2)              <---------ATERF1(2)                                  --------->TOE1(3) ------->ZAT14              <---------At4g35610  --------->O2                      <---------DAG2 --------ZAT14     <---------ANAC58 --------->AGP1                                 --------->TOE2(3) --------ZAT18     <---------ANAC58 <---------GLK1(2)                           <---------ALFIN1 ---->LBD16     <---------GLK1(2)  --------->At4g35610                         ------>ZmHOX2a(1)   -- ----DEAR3(1)  <---------At4g35610 <---------At4g35610                  <-----------GT1  --------->TOE2(3) ---LBD16      --------->At4g35610----------->ARR10                   <----------DOF2   --------->ZAT6   gtgcagttcccgatttcagatgcttactccagccgtcagatcctccttgccatgtctgttctcagtccctctctttacttcctcaccttaaccctaacta  1605200                                                                                      --------->LBD16                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC55(2)                                                                                 <----------DOF2                                                          ----------->GT1       <---------ANAC58                                                       --------->ARR14(2)    ---------->ID1                                                  --------->ALFIN1     <---------ARR14(2)                                              --------->At4g35610      --------->ARR11(3)    <---------ARR11(3)                        <---------ZAT2      <-----------HVH21  <---------ANAC46    --------->ARR11(3)                  <----------DOF2<---------ARR14(2)  <-----------RAV1(1) <-----  >>>>>>>>>GT-1                    <---------AtMYB61 ----------->ARR10<---------CCA1(2) ---------->DOF2 --------->GT1            <----------DOF2     <---------At4g35610----------->GT1<---------ANAC58<----   caggtaaatcttgtcatcagtttcttctctttgggttttggtctttgaagctgtggagatttgtgaaatgtcaaatcttgttgctttccgtaaagaccct  1605300                                                                                            ------->TEIL                                                                                           <---------                                                                                 ----------->GT1                                                                          --------------->AGL15                                                                          <---------------AGL15                                                                         <-----------------AGL1                                                                         ----------------->AGL3                                                                         <-----------------AG--------                                                               --------->MYB59  --------->MYB59                                                               <---------TOE2(3)<---------TOE2(3)                       ---------->DOF2              <-----------RAV1(1)  ----------------->AGL1 -----                 <---------WOX13(1)               <---------ANAC58       <-----------------AGL2 ----- ----DAG2      --------->ATHB12                   <---------ANAC58     <-----------GT1--------->ICU4 ------DOF2   <---------YAB1         <-----------RAV1(1)       <---------TOE1(3)<---------TOE1(3)   tttgaagttgggagttttgattgaaaaaagagacatctactgttgtctatattcgtgttggagtttaggttttaatccattttaggtaaaaatgaaccat  1605400                                            <---------ANAC46                                            <------MYB46(1)                                --------->AHL20(1)                                --------->AHL20(2)                                <---------AHL20(1)                                <---------ARR11(3)                                --------->ARR11(3) --------->KAN4(2)                      <---------AHL20(2)    <------MYB83                      --------->AHL20(2)   <---------MYB46(3)    <---------GLK1(2) --------->GLK1(1)    <---------ICU4       <---------AtMYB61   <---------YAB1         <-------TEIL --GT1   <---------ZAT18       --------->CCA1(2)  <---------KAN4(1)       <----------DOF2 ->MYB46(3)          <---------AHL20(2)    --------->MYB46(2)--------->YAB1        --------->At4g35610 ->MYB83<---------ZAT6--------->ATHB51<---------TOE2(3)    ------->TEIL  <---------MYB52(1) ->MYB46(1)          --------->ICU4   <---------TOE1(3)   <---------CCA1(2)        <---------At4g35610   ccgatttctagtgttcttgggaaattatttcagatatattagggtttggtgaacattcttgaatcttgattctctgttttttggcagatgcaatacatcg  1605500  Previous    Next  AGI:  At4g03600.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G03730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69749.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70485.1) Range:  from: 1603700    to: 1604506    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g03610.1    Description:  phosphonate metabolism protein-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G30300.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40361.1); contains domain SSF56281 (SSF56281); contains domain G3DSA:3.60.15.10 (G3DSA:3.60.15.10); contains domain PROKAR_LIPOPROTEIN (PS51257) Range:  from: 1605037    to: 1606857    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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