Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ----------->HVH21             --------->AHL20(1) <---------AHL20(2)            --------->YAB1     <---------YAB1     ----------->GT1        <---------YAB1     <---------TOE2(3)     <---------ARR11(3)                                              --------->ARR11(3) --------->TOE2(3)         <---------GLK1(2)  --------->MYB52(1)       <---------LBD16 --------->CCA1(2)   ttacattaagttaaacatattaaaaacaagattattatttgacagaaaaaacgggtattgtatatgacaaaaactcggatgaatacgagataagatagtt  1602500                    ------>MYB46(1)                 ------->GAMYB                  <---------MYB59                  --------->ANAC58                  <---------MYB111(1)              --------->ANAC58                      <---------WRKY38(1)                 --------->ANAC55(2)              ------>MYB46(1)                       <<<<<<<<<<WRKY38          --------->LBD16                         ------>MYB83  --------->KAN4(2)       <<<<<<<<<<WRKY43        <---------LBD16                          --------->MYB52(1)                     <<<<<<<<<<WRKY26      <-----------GT1   <----------DOF2         --------->AtMYB61   --------->TOE2(2)   --------->WRKY18(1)    <----------DOF2 ------>MYB83 --------->YAB1--------->MYB46(3)   --------->TOE1(2)  <-----------HVH21   tctgttctttaccggacatacctaatctttttgtttgataattttcaaaaccaacgcacagaagaacataccttcgagtcttctatattggtcaagtctt  1602600                                                                                                 <---                                                                             <---------AHL20(2)------                                              <---------TOE1(3)              --------->ATHB12  <-----           --------->ANAC46                   <---------TOE2(3)             --------->AHL20(2) <-----           --------->ANAC58                  <-----------GT1        --------->YAB1       ------------           --------->ANAC58         <---------ANAC58               <---------YAB1        ------------         --------->MYB52(1)         <---------ANAC58             --------->CCA1(2)  <----------DOF2       <---------MYB52(2)      <---------ANAC55(2)              --------->ARR11(1)  <---------DAG2       --------->MYB46(3)      --------->ANAC55(2)     ----------->GT1      --------->ICU4<---------AtLEC2   gggaatcaaacaaacgcaaaacagagttggattacataccttgctcttaacgatatatagtttatagatatgatagtatttattagctttttccatgtcg  1602700                                                                     ------->TEIL          <---------TOE2(3)                                                                  --------->AtLEC2   <------NtERF2                                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---NtERF2                            ----------->GT1  --------->TOE1(2)            ------>NtERF2---- --->ETT(1)                  ------->TEIL              --------->TOE2(2)           --------->RAP2.6(2) ----ANAC46               --------->ANAC55(2)         --------->HSFB2a(1)          --------->RAP2.3(2) ----LBD16                <---------ANAC55(2)         <---------HSFB2a(1)          --------->ANAC46 ----->AGL1             <-----------GT1    --------->YAB1       --------->CCA1(2) --------->RAP2.3(1) ----->AG          ---------->DOF2   <---------ARR11(3)--------->TOE1(3)       <-----------RAV1(2)   ggataagactgttcatcgaaggaaagttacgaatttgaagatgtataatactccaaaccttcgaagctatgcacatcccattcaggcgccattaacatat  1602800                                              <---------ARR14(2)          <-------TEIL                                              <---------ARR11(3)         --------->ARR14(1)                        <---------AtMYB61     <-----------ARR10         --------->ARR14(2)                      --------------------->WRI1                        <---------ARR14(2)                   --------->MYB52(2)         --------->ARR11(3)        <---------GLK1(2)                 <---------MYB52(1)           --------->ARR14(2) xxxxxxxxxxxxxxxx>smallRNA(i)                <-------MYC3                 <---------CCA1(2)--------->ZAT2                ------->MYC2            --------------------->WRI1  --------->LBD16                ------->MYC3         <-----------TGA1         <---------At4g35610                <-------MYC2         <-----------HVH21        --------->At4g35610              ------->TEIL         ---------->ID1          <---------At4g35610 ----->YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        --------->YAB1 --------->ARR11(1)   caaaattagcctcatgcacgtttgttttggtttcttcgtcgtcactggtatcttcgctctcatcagcttccacagattcgatttcttccatcaacttgct  1602900                           --------->ZAT18                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    <---------TGA1a            <---------YAB1                    --------->O2             --------->YAB1                    <---------ANAC55(2)     --------->ICU4                    --------->TGA1a         <---------YAB1     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                    <---------O2       <------ZmHOX2a(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  ========================HOX2a_HOX2a    ------>ZmHOX2a(1)            --------->YAB1 <---------ZAT14 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)         --------->TOE2(2)           <---------YAB1  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         --------->TOE2(3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<---------ICU4 --------->TOE2(3)<---------GLK1(1) <---------DAG2 <-----------TGA1--------->ATHB12   ------>ZmHOX2a(2)------>ZmHOX2a(1) <---------ARR11(3) =============================bZIP_DOF ===================HOX2a_HOX2a <---------CCA1(2)  --------->TOE1(2) <----------DOF2<-----------HVH21 <---------WOX13(1)        --------->TOE1(3)--------->GLK1(1) ------   caacttttcttctatcatcgtcacgtttgcacactgattgaggaccatgatgatcgactaaaccctaatcctctatctgaaatcccaaaatcctaagatg  1603000                                          --------->HSFB2a(2)             ------------>CBF                                    <---------YAB1                       <-----------------AGL1                                --------->TOE1(3)                 <------------CBF                                --------->TOE2(3)                --------->ATHB51                                <---------MYB59                 <---------YAB1                                <---------DAG2                --------->YAB1                             <-----------GT1      ----------->GT1<---------ICU4      <----------DOF2                        --------->AHL20(2)------>ZmHOX2a(1) <-----------GT1      <------MYB46(1)     --------->HSFB2a(2)<---------AHL20(2)<---------HSFB2a(2)>>>>>>>>>MYB98      <------MYB83 ------- ----->GT1            <-----------TBP  <---------YAB1     --------->AHL20(2)    --------->MYB59   taattctctagaccgagcgatggtatttaaattaccttattatcctagaaacatgtgaaatttaacataattgtcatccaatttggtctttcaaaaaaaa  1603100                                                                         --------->ICU4                                                               --------->ANAC58                                                               --------->ANAC55(2)                                                               --------->ANAC46                                                               --------->ANAC58                                     <---------AHL20(1)     <-------TEIL <---------YAB1                                     <---------ARR11(3)    --------->CCA1(2)        <---------ARR11(3)                         --------->DAG2                   <---------GLK1(2)<---------ARR11(3) <----------DOF2        ---------->DOF2       ---------->DOF2 <---------LBD16       --------->ARR11(3) -->AHL20(2) ----------->GT1    ------------>CBF      ---------->DOF2  --------->YAB1         <------   attcttttttttgctcagttaaaaaaaaaagttcaacaatatatgttccaaagacaaaaagattcacgcattttcatgattttagagttcttagaatttt  1603200                                                                                            <--------                                                                                            ---------                                                                                           --------->YAB1                             <-----------GT1                                     <---------------AtSPL3                          <---------AHL20(2)                                     --------------->AtSPL3                         <---------AHL20(2)                                      --------->DAG2                         <---------AHL20(1)                                      <---------------AtSPL8                         --------->AHL20(2)                         <----------DOF2  <-------TEIL             --------->At4g35610 <---------------AGL15          <---------GLK1(1)--------------->AtSPL8     ---------->DOF2  <---------AHL20(2)                    --------->YAB1     ---------->DOF2    <--   <---------YAB1    --------->AHL20(2)               <---------TOE1(3)      --------->ANAC58     --- ---AHL20(2) <---------At4g35610 --------->LBD16      <---------TOE2(3)      --------->ANAC58 -------   ttgttataaaaggtttgcagacattaatttttttccccaaattagagtttttagttgaggtattagaattctttttatcaagaaaggtacttataaaaat  1603300                                                                                                   <-                                                 ------>ZmHOX2a(1)                            <------                                                --------->TOE2(3)                            --------                                                --------------->AGL15                       <--------                                              ------>MYB83                                 --------->AHL20(2)                                              ------>MYB46(1)                             <---------ICU4  <---------YAB1                         <---------ALFIN1                                 --------->ATHB51 -AHL20(2)    <<<<<<<<<<GATA-1           --------->REM1(1)                                --------->YAB1 >AHL20(2)   --------->GLK1(1)           <-----------GT1                                  <--------HAHB4 -------ANAC55(2)                      <-----------GT1                                   --------->ICU4 ------>ANAC55(2)                   ----------->GT1                                <-----------GT1 -- -->YAB1----------->GT1     <-----------RAV1(1) <---------------AGL15 ---------->DOF2    <---------YAB1   aagtatcagtgtgtgaaatccactacttcaatgttggaatgttacaccttcctcaagaaggaatttgagtaagaaagaagttgtgtaacccattattata  1603400  Previous    Next  AGI:  At4g03590.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G03570.1); contains InterPro domain Cystatin-related, plant (InterPro:IPR006525) Range:  from: 1600778    to: 1602948    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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