Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    --------->ANAC58                                                  --------->ANAC58                                             ------->GAMYB                                            --------->MYB46(3)                                           ------>MYB83                                           ------>MYB46(1)                                          --------->MYB52(1)                        <---------ICU4   --------->AtMYB61                     <---------ICU4      --------->DEAR3(1)              --------->TOE2(3) ---ANAC46           --------->YAB1--------->ARR14(2)            --------->AHL20(2) --------->DAG2 ---ANAC58          <---------ATHB12    --------->MYB46(3)     ----------->GT1     ---------->DOF2 ---ANAC58      <---------ATHB12   <---------ARR14(2)   ---------->DOF2 ----------------->AGL1   ctaatttccctcgcacaaatcaataatcagttctcaaaatccaccaacgagcacgaatcaaagacaagttaataaccaaaatcgaaaaaggaatagtgag  1563800                                       <---------RAP2.3(2)                                   <------NtERF2                                       <---------DEAR3(1)                                   ---------                                     <---------ATERF1(1)            <-------TEIL     --------->ANAC46                          --------->At4g35610                   <---------TOE2(2) <---------WRKY45                       --------->LBD16--------->RAP2.6(3)      <---------STY1(1)  <---------WRKY12                       ------>ZmHOX2a(1)   <----------DOF2     --------->STY1(1)  <---------WRKY38(1)                     ----------->RAV1(2)------>NtERF2     --------->GLK1(1)      --------->WRKY18(1)           <---------MYB52(1)       ----------->HVH21 <---------HSFB2a(2) ------->TEIL    <---------LBD16       --------->MYB52(1) <---------At4g35610       <---------------------WRI1  <-----------HVH21   aaaacatactatcggtagtagtttcctgagcttcacagacgacggctcttcgtaatcgagaaaccctaggttgatgaatcgaggtcaacgaagccggaga  1563900                                                     <---------HSFB2a(2)                                                     ------>NtERF2                                                    --------->DEAR3(1)                                                  ------>NtERF2                                                  --------->LBD16                                                 --------->ANAC46                                                 ------->GAMYB                                              --------->ARR14(2)                                             --------->HSFB2a(1)                                             <---------HSFB2a(1)                            ---------                                            ---------->TaMYB80                             <---------GLK1(2)                                  --------->SPL7--------->MYB46(3)                     --------->CCA1(2)                         <---------ICU4     ----------->ARR10                         --------->ARR14(2)                        <---------YAB1  <------NtERF2--------->HSFB2a(2)              <---------ARR14(2)          <---------GLK1(2)     <---------MYB52(1)--------->At4g35610                 --------->ARR11(1)          <---------ARR14(2)   --------->LBD16<---------ARR14(2)                     <------ZmHOX2a(1)  ---------->DOF2  ----------->RAV1(2)<---------DEAR3(1)                           <---------TOE2(3)< >LBD16   --------->ARR14(2) <---------LBD16<---------KAN4(2)                    --------->ICU4     <   gagagaaagacggattctcaaacctgatgattccggtaagacggcgaacatccgccgagaagagagagaagaagccgatggtgatgaggatacgattctg  1564000                                                                                                   --     <---------At4g35610                  <---------At4g35610                      <---------ARR14(2)     --------->At4g35610                  --------->At4g35610                      --------->ARR14(2) >GLK1(2)     <---------GLK1(1) <-------TEIL--------->RAP2.6(2)           --------->ARR14(2)       -- ---------LBD16        <---------------------WRI1                         <---------ARR14(2)      --- ---------HSFB2a(2)   <------ZmHOX2a(1)---------->DOF2              <------ZmHOX2a(1)           -----   gtctcggagcggagagaaatcggaggacgagaggtacaagtgaaagcagccatggctatagatagagagaggagaggtttctccaaatccccaagtgaaa  1564100                                                                                           <-------TEIL                                                                                          *TSS    --------->ARR11(3)                                                              --------->AHL20(2) --------->AHL20(2)                                                            <---------RVE1(1) --------->YAB1                  --------->MYB52(1)                           <---------ARR14(2) ------->AHL20(2)          ---------->DOF2                                    <---------ARR11(3) ------->AHL20(1)       --------->AHL20(2)--------->MYB52(1)                  --------->ARR14(2) ------>YAB1      ----------->GT1<---------DOF5.7(2)                          <---------GLK1(2) ---->AHL20(2)  ----------->GT1--------->ARR11(3)          <---------ETT(2)   --------->ARR11(3)   aaataatatccagatagatagagaaaataaaaagataacgaaactaatggaagagaaaatgtagacaaaacactgatgcagattttttatatatacatca  1564200                                                                                           --------->AHL20(1)                                                                                           --------->ARR11(3)                                                                                           <---------ARR11(3)                                                                                     ----------->GT1                                                                                   <------------CBF                        --------->ANAC55(2)                 ----------->GT1      <---------AHL20(2)          <---------YAB1<---------ANAC55(2)     <---------AHL20(2)               --------->AHL20(2)         <---------ARR11(3)                     --------->AHL20(2)               <---------AHL20(1)         <---------AHL20(1)                    --------->YAB1                    --------->AHL20(1)         --------->AHL20(1)                    --------->AHL20(2)      <---------HSFB2a(2) <---------AHL20(1)         --------->ARR11(3)               ------------>CBF----------->GT1     --------->YAB1<--------   acacaaacaaatatttttggaaaaataagtatttctactaaaaatacaattaaaatacagttgtgaaaaaaatcgagaaataataaattgaaatattttt  1564300                                                    ----------->GT1                           <---------YAB1          ------------------------>ANAC81                         <---------GLK1(1)         --------->DAG2                 --------->At4g35610              ---------->DOF2                 <---------At4g35610         --------------->AGL15           <---------MYB46(3)                <---------------AGL15  <---------AHL20(2)    <---------ARR11(3)   ------->GAMYB              ----------->GT1<---------AHL20(2) -YAB1 --------->ATHB12 --------->ARR11(3)--------->MYB52(1)        --------->ARR11(3) <---------YAB1   gaatttttttgatttgttgagctgtagatatcatttgcccaaaataaccgaaaaaagtagaaaacgaaaacatattgtaaattgtttttttaattgtttg  1564400                                                                                        <---------DAG2            ----------->HVH21                                                           <----------DOF2          <---------At4g35610                              <---------YAB1               =============          --------->At4g35610                              <---------AHL20(2)    <-------GAMYB        --------->ZAT14                              <---------CCA1(1)           <---------At4g35610        --------->ZAT18                              <---------RVE1(1)           <---------ZAT2        <---------ZAT14                             <---------ARR11(3)           --------->At4g35610        <---------ZAT18                             --------->ARR11(3)     --------->MYB59   --------->ARR11(3)        --------->YAB1  <----------DOF2--------->ATHB12     ====================   ggtaagatagtgctctgactaagcccatctgtaataagcccataaaacttttgagatattttttattgggctcatattaggccagttgcacttttttttt  1564500                                                 --------->ANAC58                                                 --------->ANAC46                                            --------->DOF5.7(2)                                            <---------MYB52(1)                                           <-----------HVH21                                           <-------GAMYB         <---------O2                     --------->ANAC55(2)                             <xxxxxxxxxx         <---------TGA1a                  <---------ANAC55(2)             <---------AHL20(2)         ==========================================MYC_MYB               <---------AHL20(1)         =====================================bZIP_DOF                   <---------AHL20(2)         --------->O2                     <---------ANAC58    ------>ZmHOX2a(2)           -----------         --------->TGA1a                  <---------ANAC58  --------->ARR11(3) <-----------------AG     <-----------HVH21             ---------->DOF2--------->LBD16        --------->AHL20(1)  -------- ==================bZIP_DOF     <-----------GT1  --------->ANAC58        --------->AHL20(2) --------- ==================MYC_MYB    <---------AHL20(2)<---------LBD16<---------LBD16 <-----------------AGL1   ttaatccagtcacttgtggatttaacagaaattttaacaaagttccgttacccgcaatttgtgatctcgggtcaatttaatgactattttggcaacatca  1564600                                                                                                    <                                                                                                   <x                                                                                                   <x                                                                                                  <xx                                                                                                 <xxx                                                                                                 <xxx                                                                                                <----                                                                   <-----------GT1            <------                                                             <---------AHL20(2)      <---------ALFIN1  --------->DAG2                       <---------YAB1       <---------AHL20(2)       ----------->RAV1(1) ---------->DOF2                      >>>>>>>>>WRKY6        <---------AHL20(1)    --------->ANAC46<xx xxxxxxxxxxxxsmallRNA(se3)          --------->WRKY38(1)     --------->AHL20(2)  <-----------GT1<----- >RAV1(1)                           --------->WRKY45        --------->YAB1   <---------YAB1   <------ ->TOE2(3)                      --------->DAG2       ----------->GT1        <---------AHL20(2)------- >REM1(1)                      ---------->DOF2     ---------->DOF2<---------AHL20(2)--------->ANAC46<   acaaaaagttagcgactgaaataagaagtcactaaaagttgactattgaaatgaaaagtcaataaaatttaaacgtattattttaccccacactaatttt  1564700  Previous    Next  AGI:  At4g03520.1    Description:  ATHM2 (Arabidopsis thioredoxin M-type 2); thiol-disulfide exchange intermediate. Identical to Thioredoxin M-type 2, chloroplast precursor [Arabidopsis Thaliana] (GB:Q9SEU8;GB:Q9ZT79); similar to ATHM1 (Arabidopsis thioredoxin M-type 1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G03680.1); similar to Thioredoxin M-type, chloroplast precursor (Trx-M) (GB:Q9XGS0); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IP Range:  from: 1562357    to: 1564190    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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