Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <------NtERF2                                                    --------->ZAT14                                                    --------->LBD16                                                    <---------ZAT18                                                    ------>NtERF2                                                   --------->RAP2.6(2)                                                   --------->DEAR3(1)                                                   --------->RAP2.3(2)                                                  --------->RAP2.3(1)                                                --------->ANAC58                                                --------->ANAC46                                                --------->ANAC58                                               --------->SPL7                                              --------->CCA1(2)       ------->MYC3                           --------->ARR14(1)       <-------MYC3                          --------->ARR11(1)                                   <--      --------->O2                           --------->ARR14(2)                                ------      <---------TGA1a                        <---------ARR14(2)                         <-------TEIL      --------->TGA1a                     --------->ANAC58                    --------->At4g35610 ---      <---------O2                        --------->ANAC58            <---------------AGL15  -------- --------->ANAC58                     --------->ANAC58                --------------->AGL15 --------- --------->ANAC58              <---------At4g35610--------->ANAC46   ----------------->AGL2 <-------- --------->ANAC46    <---------TOE2(3)--------->ANAC58               ----------------->AGL3 <--------   tttaagccacgtttccaatttctaagaatgtttagctcataggcaaggatacgccgcactaggtggtcatgaccataaatagctgcaagatgcagaatcg  1552700        ---------->DOF2     --------->LBD16     ----------->HVH21    --------->LBD16   <---------LBD16   ----------->RAV1(2) -------ARR14(2) --->YAB1      ----------------->AGL1                                       --------->ANAC46 ------>ARR14(2)                                                      --------->TOE2(3) ->GLK1(2)     <---------At4g35610                                    --------->TOE1(3)             < >ARR14(2)   --------->ZAT18                                          <---------MYB59              <- -GLK1(2)--------->DAG2                     ------>ZmHOX2a(1)         <---------DAG2  <---------ZAT18 -ARR14(2)  ----------->HVH21 <------ZmHOX2a(1)     <---------DAG2  ------->TEIL --------->MYB46(3)<-   tattcccctgaaaagtgacctgatcaagaacaggaatttcattctcctccataaccttttcaaactcttgaaccttacccataaccactgccctataagt  1552800            ----------->GT1     <-------TEIL     ------>ZmHOX2a(2)    <------ZmHOX2a(2)   <---------ARR11(3)         <---------YAB1   <---------ARR14(2)       <-----------GT1   --------->ARR14(2)     ------>ZmHOX2a(2)                                                <---------  <------ZmHOX2a(1)     --------->ARR11(3)                                         <---------ANAC58  ===============================HOX2a_HOX2a                                       <---------ANAC58 ---------TOE1(2)       <---------ARR11(3)         <---------ARR11(3)            <---------YAB1 --------LBD16     --------->DAG2                  --------->ARR11(3)      <---------At4g35610 ----------RAV1(2)---------->DOF2          <---------ZAT6                  --------->At4g35610      <   ctcaggatccatagatgtaataaagtgatcttactattcaaacttgtgttataggtcttcttctcaaggatgcagagagctgtatgcttgtgactttgaa  1552900                                                                                <---------GLK1(2)                                                                          ------>MYB46(1)                                                           --------->TOE2(3)>>>>>>>>>RAP2.2                              --------->YAB1             --------->ARR11(3) --------->YAB1            --------->HSFB2a(2)     --------->YAB1       <---------ARR11(3) --------->TOE2(3) -DOF2      <---------HSFB2a(2)    <-------TEIL       <---------GLK1(2)   ------>MYB83 ---------LBD16              <-------TEIL        <-----------GT1         --------->WOX13(1) ---------   actctgggactcttcaagaagcacgatgacattcatattcatagtacatagttacagattatcttattcaaataccaatctaaattctctgagaacgtga  1553000                       <------NtERF2                                         --------->ICU4                       <-------GAMYB                                       <---------------AGL15                       <---------At4g35610                               ------------>CBF                       --------->At4g35610                              --------->ANAC58                     <---------DEAR3(1)                          ----------->GT1        --------->ARR11(3)                                       <---------ANAC55(2)        --------->GLK1(2)         <----------DOF2                --------->ANAC55(2)   --------->ALFIN1 <---------ZAT6      <---------RAP2.6(2)             <---------AHL20(2) --------->ANAC58 ----------->GT1    --------->RAP2.6(3)             --------->AHL20(2)  --------->ANAC46 -->GT1<---------GLK1(2) <---------MYB46(3)         <---------AHL20(2)  --------->AtLEC2  *TSS   atagtgtaagaatcttggactagtcggctgttcatgctttggatagtttacaaattaaataacaaatatgtaacatgcaattttgggaagtgggaacgaa  1553100                                                                                    <---------ANAC58                                   --------->ATHB51                                 <---------ANAC58                          <---------GLK1(2)                                     ---------->DOF2    <-                       --------->AHL20(2)  ---------->DOF2               --------->At4g35610       <-                <------ZmHOX2a(1)  -------->ATHB1                      --------->YAB1             ---             <---------LBD16       --------->ATHB12                   <---------ATHB12         ------ <---------ZAT6--------->LBD16    <---------YAB1  <---------ZAT6    --------->WOX13(1)        <------   gtagacttaaactattcaggaaaaaaaaaattctctattattgaacaaagtagacttaaaaaaaacatttcaatcagatggagaaagcttgtggtgatga  1553200                                                                                           ==========                                                                          --------->At4g35610                                                                       --------->At4g35610 ------>ZmHOX2a(2)                               --------->ANAC58                        --------->ZAT2    <---------ARR11(3)                               --------->ANAC58                        ----------->RAV1(2)<------ZmHOX2a(2)                             ---------->DOF2                           <---------At4g35610===========                          --------->ANAC46                             <---------ZAT2    --------->ARR11(3)                         <---------LBD16                       =======================HOX2a_HOX2a --------->PCF2    --------->ARR11(3)                          ------>ZmHOX2a(2)      <---------TOE2(3) -----MYB83        <---------ARR11(3)                        ------->TEIL <---------At4g35610 -----MYB46(1)    --------->HSFB2a(1)                        --------->ARR11(3)    <---------WOX13(1) ------>MYB59     <---------HSFB2a(1)                        <---------ARR11(3)==================HOX2a_HOX2a --->ATHB12    <------ZmHOX2a(1)                             --------->ARR14(2)===================HOX2a_HOX2a ---YAB1    <---------LBD16------->GAMYB                     <---------ARR14(2)------>ZmHOX2a(1)   taggtcccgcttactcaggaagatttcaacggaaagcaaggtaatagtctagactctagaatggatcttcttcagctgctcctagattgacgatctcata  1553300                   ------>ZmHOX2a(1)                   ============================HOX2a_HOX2a                ------>MYB46(1)                ------>MYB83             --------->MYB46(3)        --------->LBD16       --------->HSFB2a(2)       <---------HSFB2a(2)    <---------ARR14(2)                                      <---------HSFC1(1)            <---------ANAC55(2)    --------->ARR14(2)                                      --------->HSFB2a(2)           --------->ANAC55(2)   <---------GLK1(1)                                    <---------SPL7                    <---------ANAC46   --------->GLK1(1)                             <----------DOF2            <-----------GT1         -   <---------CCA1(2)        <----------DOF2<---------DEAR3(1)  ---------->DOF2       --------->LBD16< =========================HOX2a_HOX2a     ------>ZmHOX2a(1) <---------HSFB2a(2)    <---------LBD16 <- =========================HOX2a_HOX2a   ------>ZmHOX2a(2)   --------->HSFC1(1)<-----------GT1     <--   ctcgcatatccagaaaccatcctactctccctttgattttgatcctcggtgctttagccgttcgagaaagagagcaattttcacttccggtctcgtattc  1553400                 --------->ATHB12                 --------->YAB1       --------->TOE2(1)       --------->TOE1(1)     ------>ZmHOX2a(2)    <------ZmHOX2a(2)    --------->GLK1(1)                     ------>NtERF2    <---------GLK1(1)                    --------->DREB2C(2)   <---------ARR11(3)                    --------->RAP2.3(3)   <---------ARR14(3)                    ----------->HVH21   --------->ARR14(3)                    --------->DEAR3(1)   --------->ARR11(3)                  <---------At4g35610                          >>>>>>>>>GT-1   --------->ARR14(2)                  --------->At4g35610                       <---------ANAC55(2)   <---------ARR14(2)<---------HSFB2a(2)--------->ORA47(2)                       ----------->GT1 -------->HSFB2a(2)  --------->HSFB2a(2)--------->RAP2.3(1)                     --------->MYB59    <- ---------HSFB2a(2) <---------LBD16    --------->LBD16                      <---------GLK1(1)   ----- --------LBD16  <---------ATHB12       ------>NtERF2                --------->At4g35610        ------ -------LBD16 --------->WOX13(1)------>NtERF2                       <---------At4g35610      <------ZmHOX2a(1)   ttcgggatctcggactcaatcatcgggaacaaggcgacttccgccgactgatgaagaacgagtctcggacatctgaagaaatcaggtaaatcggaggatg  1553500                     --------->GLK1(1)                    <---------ARR11(3)                ---------->DOF2             --------->ANAC58             --------->ANAC58            --------->SPL1(2)            --------->SPL7            <---------LBD16           <---------SPL1(1)                                <---------ZAT18         --------->TOE1(1)                           --------->ARR11(3)              <---------AHL20(2)         --------->TOE2(1)                           <---------ARR11(3)             <---------AHL20(2)        <---------------AtSPL3<---------AHL20(2)   <---------YAB1           <---------ANAC58       <------------------SPL14                    <---------TOE1(3)        <---------ANAC58 --------AHL20(2)   --------->ARR11(3) <---------ZAT6<---------GLK1(2)      <---------ANAC46 ------>GT1--------->SPL1(1) <---------AHL20(2)    ----------->ARR10      <---------YAB1 ----->GT1<---------SPL7     --------->AHL20(2)    <---------TOE2(3)  --------->GLK1(2)        <-----   ttaaattttcgtcgtacggaaagaactccattttaattttagtcttagacgttaagattttgggcccttgagaattttgagtgttttttatttgggcctt  1553600  Previous    Next  AGI:  At4g03490.1    Description:  protein binding. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G03500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23948.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 1549616    to: 1552782    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g03500.1    Description:  ankyrin repeat family protein. similar to ankyrin repeat family protein [Arabidopsis thaliana] (TAIR:AT4G03460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23948.1); contains InterPro domain Ankyrin (InterPro:IPR002110) Range:  from: 1553090    to: 1556569    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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