Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->TGA1a           <---------ATHB12      ==========================MYC_MYB      <---------------------WRI1 <-------GAMYB   ======================bZIP_DOF      <---------PCF2            <---------MYB46(3)     ----------->TCP11(1)       --------->MYB55(2) <------MYB83                  <---------AtMYB61 --------->ANAC46 --------->MYB55(2)         <---------AtMYB61    <---------TGA1a <------MYB46(1)            --------->ALFIN1     <---------O2 --------->MYB52(2)      <---------ARR14(2)      --------->O2 <---------MYB46(3)     <------NtERF2          <---------DOF5.7(2) ---------AtMYB61      --------->LBD16        <-------TEIL   --------->DAG2 ---------DEAR3(1)    <---------ANAC46       <-----------HVH21          <---------MYB52(1) --------MYB52(1)    <---------LBD16      <---------TOE2(3) ---------->DOF2                    ------   cgttggtgggccaattgttcgaaggcggagatggtggttgaattagggttcacgtcgatcgataaagtcttcccgtttggaatcgagagaaacaccatcg  1520500                     ---------->DOF2                    <---------WRKY45                    <---------WRKY12      --------->RVE1(1)                    <---------WRKY38(1)  --------->ARR11(3)           --------->GLK1(2)             --------->GLK1(2)                               <-------TEIL          <---------GLK1(2)              <---------ARR11(3)                             <-----------HVH21          <---------ARR14(2)   ------>MYB46(1)    <-------GAMYB                       <------MYB83 --   ------>MYB83<---------LBD16 ------>MYB83    --------->At4g35610                    <---------MYB46(3)   ------>MYB46(1) --------->WRKY18(1)  --------->RVE1(1)                    --------->AHL20(2)  ---- --------->TOE2(3)<-----------HVH21   <---------AHL20(2)        ---------->DOF2      <---------DEAR3(1) <---------MYB59 --------->LBD16     --------->YAB1          *TSS      ----------->GT1<------MYB46(1) --->YAB1 --------->ARR14(2) <---------MYB59   <---------At4g35610    --------->ALFIN1<---------DEAR3(2)   taacctaatcgagattctccggtcaaagaaaccaaactataaaaatctctgctgttacaacgaatataaagggtggaaaaaaaatagtcggttcagaggt  1520600          --------->CCA1(2)          <-----------TBP          --------->GLK1(1)         --------->ARR14(2)         <---------ARR14(2)     --------->ALFIN1    <------NtERF2    <-------GAMYB   <---------DEAR4(2)   <---------MYB46(3)                                                                              <-  --------->ALFIN1                                             <---------MYB52(1)            <-------  <---------DREB2C(2)     <---------AHL20(2)              --------->AtMYB61            --------->DAG2  <---------DEAR3(1)  <----------DOF2                    --------->MYB46(3)    <----------DOF2------>NtERF2 ------->DAG2     <---------ZAT18 <---------DAG2<------------CBF     <---------YAB1   ---------->DOF2 ------>DOF2      --------->ZAT18 <----------DOF2 ----------->GT1  --------->YAB1  --------->YAB1  --   aaaggcggtgggatatgtagtgggctttttaatgggctttttgaacttcatattgtaaaaccaccgttagtataattcgagcttttcataaagcgacacc  1520700                                                                                                    <                                                                                                    <                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    -                                                                                                    <                                                                                                   --                                                                                                   <x                                                                                                   xx                                                                                                   xx                                                                                                   xx                                                                                                  <--                                                                                                  xxx                                                                                                  <xx                                                                                              ------>ZmHOX2a(2)                                                                                            <--------                                                                                           xxxxxxxxxx                                                                                           <xxxxxxxxx                                                                                         --------->ALFIN1                                                                                        <xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                       <---------ANAC58                                                                                       <xxxxxxxxxxxxx                                                                                       <---------ANAC46                                                                                       <---------ANAC58                                                                                     <xxxxxxxxxxxxxxx                                                               --------->AHL20(2)    <xxxxxxxxxxxxxxx                                           <---------AtLEC2    <---------AHL20(2)   <xxxxxxxxxxxxxxxxsmallRNA(s)                                           <---------ANAC58--------->AHL20(1)      <xxxxxxxxxxxxxxxxsmallRNA(s)                                  --------->bZIP60(1)      <---------AHL20(2)      <xxxxxxxxxxxxxxxxsmallRNA(i)                                  --------->O2   <----------DOF2                   --------->ALFIN1xx                                  <---------bZIP60(1)     --------->AHL20(2)    <---------ANAC46  xxx --------ARR14(2)                 <---------O2  <---------ANAC58           <---------ICU4<xxxxxxxxxxx --ALFIN1                      --------->ANAC46 <---------ANAC58<---------AHL20(2) <xxxxxxxxxxxxxxxsmallRNA(si3) ------->ARR14(2)    <---------AtMYB61     <---------ANAC58--------->AHL20(2)  <---------LBD16<xxxxxx   gtatatgactatctctgtgtgttttggttttaaacgacgtcgtttgcatggctttgggaaaaaaattaaatgactaaatattgcggtgagcgtggatcga  1520800                                                <---------ALFIN1                                        --------->At4g35610                                        <---------At4g35610      <---------ATHB12                                       <xxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxsmallRNA(si3)                                       <xxxxxxxxxxxxxxxsmallRNA(fl3)              ------>ZmHOX2a(2)        <xxxxxxxxxxxxxxxsmallRNA(se3)            <---------GLK1(2)         <xxxxxxxxxxxxxxxxsmallRNA(se3)            <---------ARR14(3)       <xxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->ARR14(3)       <xxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->AGP1           <xxxxxxxxxxxxxxxxxsmallRNA(fl3)            <-----------ARR10       <xxxxxxxxxxxxxxxxxxsmallRNA(le3)            <---------ARR14(2)      <xxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->ARR11(3)      <xxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->ARR14(2)      <xxxxxxxxxxxxxxxxxsmallRNA(fl3)            <---------ARR11(3)      <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <-----------HVH21           ----------->RAV1(2)       ------------>CBF     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       --------->ANAC46 ------------>CBF     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)<xxxxxxxxxxxxxxxxsmallRNA(s)    ------>NtERF2                  <---------ZAT2      --------->ANAC55(2)  ----------->HVH21                --------->ZAT2  <----------DOF2 <xxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxsmallRNA(i)       <xxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxsmallRNA(le3)     <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -------->ANAC58                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) -------->ANAC55(2)               --------->MYB52(1)  *TSS  --------->ZAT6 -------->ANAC58                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------->ANAC46                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------ANAC55(2)               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------->TOE1(2)                  <xxxxxxxxxxxxxxxsmallRNA(fl3) --------->ANAC58 xxxxxxxxxxxxxxxxsmallRNA(le3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2) xxxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxxxxxxxxx>smallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxxxxxxxxxxxxx>smallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------ALFIN1<xxxxxxxxxxxxxxxxsmallRNA(i)     <---------LBD16  --------->ANAC58 xxxxxxxxxxxxxxx>smallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxsmallRNA(fl3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) -ARR14(2) <---------CCA1(2)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxx>smallRNA(i)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxsmallRNA(fl3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) xxxxsmallRNA(s)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxsmallRNA(fl3)            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxsmallRNA(s)                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           ------ xsmallRNA(s)<------ZmHOX2a(2)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)             --------->CCA1(2) xxxsmallRNA(fl3)             <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)           <---------ARR11(3) xxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->WOX13(1)    ----------->GT1 xxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->ARR11(3) xxxxxsmallRNA(i)     ----------->HVH21<xxxxxxxxxxxxxxxsmallRNA(le3)       ---------->DOF2 --------->AHL20(2) xxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ATHB12  ---------->DOF2   acacgcgaccttcagatcttcagtctgacgctctcccaactgagctatccccgcttcatgtaacacaatcaatgagtaaaagatatatagaaagaaaata  1520900                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                <xxxxxxxxxxxxxxxsmallRNA(si3)                                                                <xxxxxxxxxxxxxxxsmallRNA(le3)                                                                <xxxxxxxxxxxxxxxxsmallRNA(le3)                                                                <xxxxxxxxxxxxxxxsmallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxsmallRNA(s)                                                               <xxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                              <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            --------->ZAT2                                                            ----------->RAV1(2)                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                            <---------ZAT2                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       ------>ZmHOX2a(2)   --------->MYB52(1)                                       <xxxxxxxxxxxxxxxxsmallRNA(i)     <---------LBD16                                     --------->ARR14(3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                     --------->ARR11(3)    <xxxxxxxxxxxxxxxsmallRNA(fl3)                                     <---------ARR11(3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <---------ARR14(3)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                     --------->AGP1       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                     --------->ARR14(2)   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                     <---------ARR14(2)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 ------>ZmHOX2a(2)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               <---------ARR14(2)        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                            --------->ALFIN1            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     ---                          <---------ANAC46              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     ---                          <---------ANAC58              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      ---                          <---------ANAC58     ----------->HVH21<xxxxxxxxxxxxxxxsmallRNA(se3)    ----                       <xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    ----                      --------->ALFIN1<------ZmHOX2a(2)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   -----                      <xxxxxxxxxxxxxxxxsmallRNA(i)     <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   ------    ---------->DOF2   <xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <------ <----------ID1       <xxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <------ --->AHL20(2)  ---------->DOF2 --------->ARR14(2)      <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------   aaaacgaaaagacaacgtaatgcggtgagcgtggatcgagatcttcagtctgacgctctcccaactgagctatccccgcttactgactctttccaaacca  1521000        <-----------GT1    --------->AHL20(1)    <---------AHL20(1)    <---------AHL20(2)    --------->AHL20(2) ------>ANAC58 ------>ANAC58 ------>ANAC46 -->MYB46(1)                                                                     --------->ANAC58 -->MYB83                                                                        --------->ANAC46 ---->MYB52(1)                ------->GAMYB                    <----------DOF2   --------->ANAC55(1) --->TOE2(2)                --------->At4g35610              ---------->ID1      --------->ANAC58   - ---MYB52(2)              --------->MYB46(3)               <---------ANAC58  --------->YAB1       --- ---MYB55(2)      --------->YAB1                           <---------ANAC58 <---------ATHB12      --- -->MYB46(3)     <---------YAB1    --------->AHL20(2)   ------>ZmHOX2a(1) --------->WOX13(1)<--------   acgtaataaattactagttatgaaaacaacaactgaatcaaatagataagaagacatcctttcgtcttttttgtttcaatcacacggaccagagccagag  1521100                                                                    ----------->HVH21                                                             --------->WRKY12                                                             --------->WRKY38(1)                                                            <---------MYB52(1)                                                           --------->At4g35610                                                       --------->ARR14(2)                                                       <---------ARR14(2)                  <---------ARR14(2)                                                      --------->GLK1(1)                    --------->ARR11(3)                                    --------->YAB1    <---------GLK1(1)                <------ZmHOX2a(1)                                   <---------YAB1     <----------TaMYB80         --------->ANAC58                                 --------->YAB1      --------->ARR11(3)          --------->ANAC58                             ------->GAMYB           <---------ARR11(3)        ---------->DOF2 ---------->HVH21           <---------MYB52(2)       --------->ARR14(2)       --------->AtMYB61     - -------->GT1               --------->MYB46(3)       <---------ARR14(2)    ------->GAMYB   --------->ARR14(2) ------>ALFIN1<---------ARR11(3) --------->TOE1(3)   ---------->TaMYB80   <---------MYB52(2)    ----- ---RAV1(2) <---------At4g35610  --------->TOE2(3)  <------ZmHOX2a(1)     --------->MYB46(3)---------   gtgtgatatgtttcagcatcttcttcatcaacaaaccataatagcattcggagaggatatccgttgcccagtgacaacgaccaaagccaggaatatatgg  1521200                                                                                                    x                                                                                                    <                                                                                                    x                                                                                                  xxx                                                                                                xxxxx                                                                                                xxxxx                                                                                         --------->ARR11(3)                                                                                       <---------AHL20(2)                                       --------->CCA1(2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                      --------->ARR14(2)     <-------TEIL             --------->AHL20(2)                                   --------->AHL20(1)       <-----------GT1     <xxxxxxxxxxxxxxxxsmallRNA(i)                                   --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxx                          --------->ZAT18          <---------ARR11(3)          ----------->GT1 <-----   --------->ZAT14        <---------ZAT18   --------->At4g35610   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->GT1         <---------------AtSPL8     --------->ARR11(3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>HVH21          ---------->DOF2<---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<-------- >CCA1(2)       ----------->GT1    <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------ARR11(3)   gacagtgtaataggcaagaagaaaatagagcacaaaataaaatacgcgctgaatatctatatatacatttttgcagcaattttgtgaaataaatcttata  1521300                        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxsmallRNA(i)                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    <xxxxxxxxxxxxxxxxsmallRNA(i)                    ------>NtERF2                    >>>>>>>>>>>>>>>>>LFY                    <<<<<<<<<<<<<<<<<LFY                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 --------->At4g35610                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                 --------->ZAT2                 <---------At4g35610               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------YAB1            <xxxxxxxxxxxxxxxxsmallRNA(s)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)          xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <-----------GT1xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                          <     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                          <x    xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                           xxx    xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                        xxxxxx   xxxxxxxxxxxxxxxx>smallRNA(i)                                                              xxxxxxxx   xxxxxxxxxxxxxxxx>smallRNA(s)--------->AHL20(2)                                        <xxxxxxxxxxx   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                 <xxxxxxxxxxx  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       <---------ARR11(3)        <-----------GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                      --------->CCA1(1)        <xxxxxxxxxxxxxx xxxxxxxxxxxxxxx>smallRNA(i)   <---------AHL20(2)    ----------->GT1        <---------AHL20(2)xxxxxxx xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            <---------ICU4          <---------AHL20(2)  xxxxxxxx xxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <---------AHL20(2) xxxxxxxxxx xxxxxxxxxxxxxxxxxx>smallRNA(si3)               --------->ICU4--------->GLK1(2)     <xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxx>smallRNA(le3)               <---------YAB1--------->ARR11(3)    <xxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxx>smallRNA(s2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      <xxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxsmallRNA(i2)  <---------TOE2(3) --------->YAB1      --------->AHL20(2) xxxxxxxxxx ----YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)--------->YAB1 --------->RVE1(1)     <xxxxxxxxxxxxxxxxx -YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------YAB1--------->AHL20(2)   ----------->HVH21<xxx   gttgggacttatttacaatagctgccactggattttaatgtttgtttttgataattagaaaaaaaatcttcaaattaaatatttgacatttaacaatctt  1521400  Previous    Next  AGI:  At4g03430.1    Description:  EMB2770/STA1 (STABILIZED1); RNA splicing factor, transesterification mechanism. similar to BGAL14 (beta-galactosidase 14), beta-galactosidase [Arabidopsis thaliana] (TAIR:AT4G38590.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN65423.1); similar to putative pre-mRNA splicing factor [Oryza sativa (japonica cultivar-group)] (GB:AAL58273.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23961.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626); contains InterPro domain RNA-processing protein, HAT helix; (InterPro:IPR003107); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains Range:  from: 1517132    to: 1520561    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g03435.1    Description:  pre-tRNA. tRNA-Phe (anticodon: GAA) Range:  from: 1520782    to: 1520854    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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