Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          ===================HOX2a_HOX2a                       --------->ARR14(2)                <----------ID1      <------ZmHOX2a(1)       --------->GLK1(2)<------ZmHOX2a(2)       ------->TEIL    <---------ARR11(3)       --------->ARR14(2)     --------->DAG2                                                        <       <---------ARR14(2)<-------TEIL   <---------AHL20(2)                                       ----    --------->ANAC58   --------->AGP1   --------->AHL20(2)                                  ---------    --------->ANAC46   <---------ARR14(2)                                                  ----------    --------->ANAC58   --------->ARR11(3)                         <------ZmHOX2a(1)    --------->HSFB2a(2) ->MYB52(1) ---------->DOF2  --------->MYB52(1)        --------->YAB1--------->ICU4    <---------HSFB2a(2)   atgtccacgaatctgaaagcgacaagatccataagggaggaattaaacaagtagcaatcttgagaagaggaaagattacaaaaaacttactggaaaagca  1494700                             <------MYB83                             <---------MYB46(3)                             ----------->GT1                             <------MYB46(1)                            --------->MYB111(1)                            <---------AtMYB61                            --------->MYB111(2)                            --------->MYB46(2)     <-----------TGA1       --------->MYB55(2)    --------->YAB1          --------->ALFIN1                                                    ----- <---------ARR14(2)         <---------MYB46(3)                       --------->AHL20(2)    ------>ZmHOX2a(1) ------ZmHOX2a(1)           <---------DEAR3(1)      ----------->GT1<----------DOF2        --------->TOE1(2) ----->At4g35610           <---------MYB55(1)   ---------->DOF2   --------->TOE2(3)     <---------ATHB12 >DAG2            <----------DOF2     <---------AHL20(2)     <----------DOF2           <---------ARR14(2) >DOF2        ------->GAMYB<--------P--------->AHL20(2)---------->DOF2                 --------->ARR14(2)   gaggaatcgtcatcaacgagctttaatgggttggtgaaattaaaacgaataaaagggtaaagtcttttcctttaaattcccaaaaacccaatcctgagag  1494800                                                       --------->TOE1(2)                                                       --------->TOE2(3)                                                      --------->ANAC58                                                      --------->ANAC58                                                    --------->MYB52(1)        =======================                                                 --------->ANAC58             <----------DOF2                            <---------MYB46(3)   --------->ANAC58           ------->TEIL            <                           <---------ANAC46      --------->ANAC46<---------TOE1(3)   <-------GAMYB <-                   <----------DOF2               --------->ANAC55(1)     <---------ATHB12 -----------   --------->AHL20(2)    <-----------RAV1(1)     <---------ANAC55(2) <-------TEIL    ================ ------>GT1   <----------DOF2             --------->CCA1(2)      <---------TOE2(3)  <---------MYB46(3)   ataaaaaaaatgcaaacttttctttttttgtgggtgagaatgagatttaagacgcaacgtaagagctaaggttcaatgaactttcgtcgttgaagtaaat  1494900                  --------->TGA1a                  --------->O2                  <---------TGA1a                  ====================bZIP_DOF         --------->ATHB51         <---------ICU4         --------->AHL20(2)         <---------AHL20(2)         <--------ATHB1        <---------ATHB51                                  <---------ICU4                     <-------   --------->ANAC46                                       --------->YAB1                     <-------   --------->TOE2(3)                                     --------->ICU4                ----------->GT1 ===========================bZIP_DOF                   --------->YAB1                --------->DAG2 ---------At5g28300              --------->ANAC58     <---------YAB1                ---------->DOF2 - ----------GT1    <---------O2   --------->ANAC58 ------->TEIL                  <----------ID1      < >GT1   <---------ATHB12   ---------->DOF2  <------ZmHOX2a(1)--------->YAB1     --------->ANAC58   <- ===========================MYC_MYB <---------ALFIN1--------->YAB1              --------->ANAC58 ----   tttaccctcaataatttgacacttgagaataaagctcgacactcgaggaatgaatcataataatcagagaagaaaacccagaacgaaaaaggaaactttt  1495000               <---------PCF2               <---------PCF5               --------->TCP15(1)     ---------->DOF2 --DAG2      <---------MYB46(3)                                --------->AHL20(2) ---DOF2     --------->ABI4(2)                                 <---------AHL20(2) ----->ZmHOX2a(1) --------->AtMYB61                            --------->ATHB51 ---------------AGL15   --------->TOE1(2)      ----------->GT1 --------->ATHB12               <------ --------MYB59 --------->TCP20             --------->ARR11(3) <---------AHL20(2)         --------->ARR11(3) ------>ID1 --------->ALFIN1           ---------->DOF2        --------->ICU4             <---------ARR11(3)   tcctaatttaagcggtgggaccaaaacctgcaaattaagaagaaagaactggagaaattcagaaattatttgggtttaagacagagtttaagttcttcat  1495100                                                                                                -----                                                                                         <---------AHL20(2)                                                                                         --------->AHL20(2)                                                                                        <---------YAB1                                                                                      <--------HAHB4                                                                                      <---------ICU4                                                                                      --------->ATHB51                                                                                     --------->ICU4                                                                     --------------->AtSPL3 <--------                                                                     --------------->AtSPL8<---------TOE2(3)                                                             <---------ANAC58      --------->YAB1----                                                             <---------ANAC58  --------->DAG2--------  *TSS                  <---------AHL20(2)                   <---------ANAC46 ---------->DOF2-------- ---ICU4  <-----------TBP                    <---------WOX13(1)     <------ZmHOX2a(2)<---------YAB1   tactgaaactgtgtttatagatttgtttatttagaaacaaaaatttgactgatgcttctatttgcttgagatcagtactaaaaagtcataattaatgata  1495200                       <-----------GT1                  --------->ATHB12                  <--------ATHB1                 <---------ATHB12                 --------->ICU4                                                    <---------ARR11(3)      --------->AHL20(2)                                                           <---------GLK1(2) ----->DOF2  <---------ATHB12                  --------->ARR14(2)           <---------ANAC58 -YAB1<---------AHL20(2) --------->TOE2(3)     ------->TEIL<---------YAB1   <---------ANAC58 ----->DAG2--------->WOX13(1)        --------->ZAT18    <---------AHL20(2)  <---------ANAC46<-------- >HAHB4   <---------AHL20(2)     ------->TEIL  <---------ARR14(2)  <------ZmHOX2a(1)--------->GLK1(2) ->YAB1   --------->AHL20(2)--------->MYB52(1)<---------CCA1(2)   <----------ID1 --------->ICU4 -----   aagtctacttaattaatcaatgatttaacttaatggatgtgtacaactgtatccctatattatgtttgaggacaagttgcgtcaagattctaatccgacc  1495300                                               <---------ICU4                                               --------->ATHB12                                               <--------ATHB1        --------->SPL7                                              <---------YAB1       --------->LBD16                                      <---------DOF5.7(2)          ----------->HVH21                          --------->YAB1    --------->YAB1         <---------SPL7             <--------ATHB1         --------->DOF5.7(2)   --------->MYB52(2)            <---------ATHB12    <------ZmHOX2a(1)       <---------MYB52(1) -ETT(1)    <---------ATHB51  <---------TOE2(3)--------->ATHB51  <---------LBD16                  --- ---->AtMYB61--------->YAB1<---------AHL20(2) --------->ICU4   <-----------GT1                  <----   aaagacttgtttcaataatagttgtcaattttaaggacgataacgagaataattggatgttagttataccggacgatgtctcagtttaatcggtgttaac  1495400                                              <---------ANAC46                                           --------->ALFIN1                                          <-------MYC3                                          ------->MYC3                        <---------TOE2(3) ------->PIF5                        --------->DAG2    <-------PIF5                                <----------ID1                    --------->CCA1(2)     <-------MYC2  --------->At5g28300         ---------->DOF2                 <---------YAB1           ------->MYC2 ----------->GT1           --------->At5g28300                 <---------TOE2(3)       <---------ANAC58                       ------->GAMYB       <          <---------MYB52(1)             <---------ANAC46                       ----------->GT1    --       --------->MYB46(3)----------->GT1 <---------ANAC58   ---------->DOF2  <---------DOF5.7(2)   -- ------>LBD16    <---------TOE1(3)  --------->SPL7    <---------DEAR3(1)     --------->MYB52(1)   <-- -----LBD16 <---------MYB46(3)    <---------SPL7<------ZmHOX2a(1)         --------->YAB1         ----   cgggtctaaaccgctggttaagataaaaggttgaatggtacgcgcgtggaggagagacggtgaaaagacgttgaaatggtaacggtaaaagacaaaatta  1495500                                                                                   <---------bZIP60(1)                                                                                   --------->bZIP60(1)                                                                                   --------->bZIP60(2)                                                              ------->MYC2         <---------TGA2(1)                                                              ------->MYC3         --------->TGA2(1)                                                              <-------MYC3         <---------O2                                                              <-------MYC2         <---------TGA1a                                                             <---------ANAC58      --------->O2                                                             --------->TGA1a       <---------ANAC58                                                             <---------ANAC58      <---------ANAC55(2)                                                             <---------ANAC55(2)   --------->TGA1a                                                             <---------ANAC55(1)   <<<<<<<<<<HY5  ---                                                             --------->ANAC55(2)   <---------ANAC58<-                                                             <---------ANAC46      ==================                                                             <---------TGA1a       --------->ANAC55(2)                                                             --------->O2          --------->ANAC46<-                                                         <-----------HVH21         <---------bZIP60(2)                                                    <---------ANAC46              ----------->STF1<--                                                    <---------ANAC58              <-----------STF1===                                                    <---------ANAC58             <---------TGA2(2)---                                                   <------NtERF2                ----------->HVH21 ---   --------->ANAC58                               ------>NtERF2               --------->At4g35610 ---   --------->ANAC58                              <---------ATERF1(2)          <---------At4g35610 --- ---------RAP2.6(3)         --------->GLK1(1)    --------->ATERF1(2)        <-----------RAV1(2)   <-- ------->RAP2.6(2)          <---------GLK1(1)   <---------ANAC58     --------->ZAT14<-----------HVH21 ------->ANAC46            --------->ARR14(2)   <---------ANAC58     <---------ZAT14<-----------TGA1- -------LBD16  --------->MYB52(2)           <---------ANAC58 <---------bZIP60(2)----------->TGA1  --- ----->At4g35610           <---------GLK1(2)<---------ANAC58 <---------O2 <-----------HVH21     <----   gccgcaaggaaaaagattagttggaattggattcccattactgttttcttgctggcgagtgtcacgtgttcttcactgtcagatgacgtcactcacttcc  1495600  Previous    Next  AGI:  At4g03390.1    Description:  SRF3 (STRUBBELIG-RECEPTOR FAMILY 3); ATP binding / kinase/ protein serine/threonine kinase. Identical to Protein STRUBBELIG-RECEPTOR FAMILY 3 precursor (SRF3) [Arabidopsis Thaliana] (GB:Q6R2K3;GB:Q0WS32;GB:Q9ZQZ2); similar to SRF1 (STRUBBELIG RECEPTOR FAMILY 1), kinase [Arabidopsis thaliana] (TAIR:AT2G20850.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24112.1); similar to LRR receptor-like kinase [Solanum tuberosum] (GB:ABS89271.1); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like Range:  from: 1490464    to: 1495102    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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