Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------------>AtMYB77                                                                                   <-----------TGA1                                                                                   <-----------HVH21                                                                                  ------->GAMYB                                                                                  --------->ANAC46 ------->TEIL                                                                    <------------AtMYB77 ---------GLK1(2)                      <---------ANAC58   <---------ALFIN1       --------->DEAR3(2) ------ARR10                           <---------ANAC58<-----------GT1           --------->MYB46(3) ----ARR11(1)                  <---------ANAC46  <---------MYB46(3)             ------>MYB83 --->GLK1(2)                ----------->HVH21    --------->MYB55(2)             -------->P ->TEIL   <------ZmHOX2a(1) ----------->TGA1    <---------AtMYB61             <---------MYB55(2) ----ARR14(2)             ----------->RAV1(2)<---------DEAR3(1)--------->ATHB12 ------>MYB46(1) --->ARR14(2)             <---------AtLEC2<---------ZAT2 --------->MYB46(3)   --------->MYB46(3) ---ARR14(1)    <----------DOF2<---------bZIP60(2) <---------ANAC46         ------>NtERF2   ---------   ctgaatctctaaggacctctttggctgtgcctgacgttgaagcttgctcggtggtttgaaccacttgatttgttctgcctccaaccgtcacagttgctga  1474100                                                                              ==================bZIP_DOF                                                                              <---------O2                                                  >>>>>>>>>EIN3               --------->TGA1a                                                 <-------TEIL     --------->ANAC58                                             ------->TEIL         --------->ANAC58   <---------DAG2                                          <---------YAB1          --------->ANAC46   <----------DOF2          --------->ANAC58             <---------ZAT6            ------>ZmHOX2a(1) <---------At4g35610          --------->ANAC58         <---------MYB52(1)   --------->ZAT14       --------->O2     <----------ID1   ----------->GT1  --------->ICU4   --------->ZAT18       <---------TGA1a    ---- >At4g35610           <---------ANAC55(2) --------->ICU4<---------ZAT18 <---------ALFIN1 <-----------GT1   atatttagggccaagtaactcatcaagtgaataagccggtagtgatgaatatacattgtggactctcctcgccatcaccctcgtgagctttttgctctcc  1474200                                                                                                    -                                                                                                   <-                                                              <---------ANAC58                    <--                             <---------ANAC58             <---------MYB52(1)                      <--                             <---------ANAC58        <---------ANAC58                          ------                   --------->GLK1(1)              <---------WOX13(1)                       <------ZmHOX2a(1)             ----------->RAV1(1)   --------->TOE2(3) <---------ANAC58   <---------YAB1  <-----------RAV1(2)  ------->TEIL --------->ANAC46   --------->YAB1--------->ATHB12 <-------GAMYB      <---------At4g35610 ----->At4g35610 --------->ZAT14 <---------YAB1<---------YAB1 <---------ANAC58      --------->At4g35610   gatgaatcttgaatgccacagaactcttgtttcttatcatcaatttgttttgattgctcggtttgctcgttgctctgattagggtcagcatcaggagaga  1474300                       <---------ARR14(2)                       --------->ARR11(3)                       <---------ARR11(3)                                       --------->ARR14(2)              <-------TEIL <---------ANAC55(2)                                  <---------ARR14(2)             --------->GLK1(2)                                             --------->MYB52(1)       <------ZmHOX2a(1)<------ZmHOX2a(2)                                  ---------->DOF2       ========================HOX2a_HOX2a     <------ZmHOX2a(2)        --------->ANAC58 -------->LBD16       <------ZmHOX2a(1)       <---------ARR11(3)        --------->ANAC58 --------ANAC46       ================================HOX2a_HOX2a       --------->ANAC46 -----TEIL----------->ARR10--------->ANAC55(2)--------->ARR11(3)    --------->AtLEC2 -------LBD16--------->CCA1(2)    --------->WOX13(1)         <---------ANAC58  <------ZmHOX2a(1)   <- --->CCA1(2)--------->ARR11(1)  <---------ATHB12             <---------ANAC58<---------TOE2(3)     --   tgcggagaaggagagattcgaagaggatcatgtaatcaatcttatgaagatcatcttcaagagccttgccatccaagtaaaggatttgtttcgaaacagg  1474400                        <----------DOF2                  ------>ZmHOX2a(2)                <---------ARR11(3)                --------->ARR14(2)             --------->HSFB2a(2)                                                                   <-             <---------HSFB2a(2)                                                                   <- --------GLK1(1)<---------ARR14(2)                       --------->YAB1                            -- ------->GLK1(1)--------->ARR11(3)  --------->ZAT6  <---------ATHB12                               --   gataccttgagacttctcgatcttctcttttatctgtaacactgtttcgccgaaatcaatagtaatggagaacgatgagccagtctcagtatcgatgtcc  1474500                                                                                              -------                          <---------ZAT14                                 --------->ANAC58 <---------ANAC46                          --------->ZAT14          ---------->DOF2        --------->ANAC58 --------->ANAC55(2) <-------TEIL        <------ZmHOX2a(2)     <------ZmHOX2a(1)           ----------->HVH21   <---------ANAC58 ------MYC2          ==========================HOX2a_HOX2a             ----------->TGA1    <---------ANAC58 ------MYC3          =============================HOX2a_HOX2a    --------->ATHB12          <---------ANAC55(2) ----->MYC3         <---------ARR11(3)  <------ZmHOX2a(1)       <---------YAB1    ----------->GT1 ----->MYC2         --------->ARR11(3)<---------TOE2(3)   --------->GLK1(2)    ------------>MYB.PH3(2)   acgttcatcgttgtagtttcaagatcagtggagagagactaaggaggaagagagaaagagaaactgatgatttgtgacgaaagtttgttaatttcgtgat  1474600             --------->ZAT6                                          <---------MYB52(1)             <-----------GT1      ------->GAMYB                     --------->At5g28300     <----------DOF2             --------->DEAR3(2)             --------->MYB52(1)   <---------At4g35610           --------->MYB46(3)           ------>ZmHOX2a(2)   --------->At4g35610           <------------AtMYB77         --------->MYB46(3)            ---------   <------NtERF2     ---------->DOF2             ====================HOX2a_HOX2a            --------- <---------RAP2.6(2)<---------WRKY45    <---------GLK1(1) <---------YAB1<---------YAB1      --------- -->ATHB12<---------ICU4  --------->GLK1(1)      ------>ZmHOX2a(1) ----------->GT1  ----------->GT1   ttggccgcttaaatatcactagtcaaagaattctaaccgtcgatttctctccttactgatatgatccaacggttattagtcgcagagtgtttataagcaa  1474700                                                  <-----------GT1                                                 <---------ZAT14                                                <----------DOF2                                          --------->ANAC58                         <-------TEIL                                          --------->ANAC58                   --------->YAB1     ----------->GT1                  --------->ANAC58                       ---------->DOF2 >ANAC58                              --------->ANAC58                      <---------ATHB12   ------ >ANAC58                             --------->DAG2                <---------MYB52(1)        -------- >ANAC46        <----------DOF2     ---------->DOF2      <----------DOF2------------>CBF     <-------   attagtaatgtgatttttctttggttttagtttttgaataaagcaagaaactttactgtcttttgctctgttttgtcaataaagattcaacatttgatct  1474800                                                 --------->ANAC46          <-------TEIL                        <---------ZAT14                                --------      <---------ZAT6                          --------->ZAT14                           <----------DOF2 >ZmHOX2a(2)                   ----------->GT1--------->ZAT18 <-----------GT1   <-----------GT1<----- ->ARR11(3)             ---------->DOF2   <---------------AtSPL8         <---------ARR11(3)  <------- --ARR11(3)         ----------->GT1   --------->YAB1       --------->YAB1--------->ARR11(3)  <-------   ttgtactagtgatacattgaagtagtaaaagaaatgtgaattagaatgtacacagagcttatagtaactcaacaagaacttatttctcttctttcagctc  1474900                     <---------RVE1(1)                     <---------CCA1(1)                    <---------ARR11(3) ->At4g35610        --------->ARR11(3)                                    <------ZmHOX2a(2) ----------AGL15   <------ZmHOX2a(1)                                     <---------ARR11(3) --ZAT2     ------->MYC3                                     ---------->DOF2      <---------ZAT6 ---- --At4g35610<-------MYC3                                --------->YAB1   --------->ARR11(3)  <-------TEIL   atattggtattacatgtgttaggatatttcagaaaacttgaagaaagactaaaaccaataagaaaaagagtttaagatcgattagtgatcaaacgttcaa  1475000  Previous    Next  AGI:  At4g03350.1    Description:  ubiquitin family protein. similar to AT7SL-1 (ARABIDOPSIS 7SL RNA 1) [Arabidopsis thaliana] (TAIR:AT4G02970.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69690.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76119.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 1473717    to: 1474508    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g03360.1    Description:  ubiquitin family protein. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT4G02950.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69690.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76119.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 1474997    to: 1475851    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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