Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   --------->LBD16      --------->ANAC55(2)       --------->LBD16      <---------ANAC58        ------>ZmHOX2a(2)      <---------ANAC58      --------->ARR11(3)      <---------ANAC55(1)  --------->YAB1                                  <---------YAB1      <---------ANAC55(2)  -------->HAHB4                                  --------->AHL20(2)      <---------ANAC46     <---------ICU4                ------->GAMYB  <---------ZAT6 ->ZmHOX2a(1)            <---------TOE2(3)             <---------At4g35610 <---------AHL20(2) --->TOE1(2)            --------->YAB1        <-----------GT1        ---------->ID1        <---------YAB1 --->TOE2(2)           <---------AHL20(2)     --------->YAB1 <---------TOE1(2)          <-------TEIL   gcgagtttacgtgagagaatagtttttaatgatcccgagttcgtcgaattacaatgcaactcccagtttttgtagttttaattagcgaaattcatcaatg  1425200                                                    --------->ANAC58                                              <---------AHL20(2)                                              -------->HAHB4                                              <---------ICU4                                             <---------YAB1                              <---------ANAC46                                             --------->ICU4                           <---------WOX13(1)                                             <---------ATHB12                       --------->ATHB12                                 <---------TOE2(3)  --------->ANAC58         <---------TOE1(2)                                 <---------------AtSPL8      <---------GLK1(1)     <---------YAB1                <----------DOF2  --------------->AtSPL8    <------ZmHOX2a(1)<---------MYB52(1)              <-----------------AG         <---------ICU4<---------TOE1(3)<---------ANAC58              <-----------------AGL3      --------->ICU4 <---------TOE2(3)<---------ANAC58           <-----------GT1   <----------DOF2 <---------ATHB51--------->GLK1(1)--------->MYB52(2)   gcattggaaattttaagccttttttggtttgttttatggtactactaattattcaagctaaggaattccaaagttttcgttcgttttgattgggtttaga  1425300                                                                                               ------                ---------->DOF2                                        <-----------GT1      ---------          <---------YAB1  <---------ICU4                         <---------ARR11(3)    --------->ICU4        <---------At4g35610                 <----------DOF2 <---------ANAC46     <---------LBD16        --------->At4g35610          --------->AHL20(2) <---------ANAC58  --------->TOE2(3) ---------     <---------At4g35610 --------->ICU4<-----------GT1  <---------ANAC58 ----------->RAV1(2)---------   agtatttggctgatgagagaaagagccataattctgaaattaaacccttttatgtgaagcttgtgtagatgttttacctgaatttcggaattactagcaa  1425400                      ----------->GT1                                                         <------                    <------------CBF                                                          <------                   --------->ATHB12                                                           -------                  <---------YAB1                         <---------CCA1(2)       --------->LBD16 ----->RAV1(1)    --------->ICU4                        ------->TEIL            <---------ANAC58 >ANAC46        --------->YAB1                         <---------AtLEC2         <---------ANAC58 >ANAC58    ---------->DOF2                <-----------HVH21          --------->ATHB12       -------- >ANAC58   --------->ANAC46      <------------CBF  <----------DOF2 <------------CBF    <-----------GT1   catttctaaatacacaaagcatgattgtaaaatgaaattgattttggtcagggctttgcatctcttggttattgaatggtgtccgtgtttcactattatc  1425500                                                      ----------->HVH21                         <----  <---------TOE2(2)                                 --------->At4g35610                         -----  <---------TOE1(2)                                 <---------At4g35610                    --------->ANAC58 -----GT1                                      ----------->HVH21                           --------->ANAC58 ---ARR11(3)                          <-----------RAV1(2)        --------->DAG2          --------->MYB52(1) -->ARR11(3)                         <-------TEIL --------->MYB46(3)                   <---------MYB52(2) ->YAB1          --------------->AtSPL8       --------->DEAR3(2)---------->DOF2   ----------->GT1   ttcttatgtttttgatttttatgtgctattttcgatagattcaggcgaagcgaccgctgatggcgataaagcttctacagaaaacagcaaaaaacggaag  1425600                                                       <----------DOF2                                                      <---------ANAC58                                                      <---------ANAC58                                                 <---------ICU4              --------->ANAC58                  <---------AHL20(2)              --------->ANAC58                  <---------ATHB51        ------>ZmHOX2a(1)                  --------->At5g28300              <----------DOF2  --------->ZAT6                    <<<<<<<<<<<<<<<<<LFY      <---------ANAC58 -----At4g35610         <-------GAMYB     --------->YAB1      <---------ANAC46             --------->ARR14(2) ---->At4g35610       <---------ANAC46    ----------->GT1     <---------ANAC58  <-----------GT1  <---   cttaagactcctatgcaagttatggcgcttgagaatttctacaatggtaaattatggctttgttgtttgcatatgttcctttataccaagttgtatatgc  1425700                                                                      <------ZmHOX2a(1)                                                                   --------->At4g35610             <-             <------MYB83                                       <---------At4g35610               <--     --------->ALFIN1              --------->GLK1(2)            --------->At4g35610      --------->ANAC58 <-----------RAV1(2)               --------->ARR14(2)      --------->ANAC58              --------->ANAC58 -------DOF2 <------MYB46(1)       <---------ARR14(2)      --------->ANAC58      --------->MYB52(1)<-   tttacaggtgtgatttggtttttctacagagcataagtatccgactgaagaaatgaagggcaagttagcagaggaagttggattaactgagaagcaagtt  1425800                                                                               <---------WRKY38(1)      <---------ARR14(2)                                                       <---------WRKY12      --------->ARR14(2)                                                      --------->WRKY18(1)    <------MYB83                      --------->AtLEC2                       <--------ZAP1         ==    <------MYB46(1)                   <---------ANAC55(2)                    <-----------HVH21     <-    <---------MYB46(3)            <-----------TGA1                         ------>ZmHOX2a(2)       --    <---------DEAR3(2)           --------->ANAC46                          ==========================   <---------AtMYB61             --------->ANAC58                         <------ZmHOX2a(2)      ----   --------->MYB59               --------->ANAC58                         ===========================  <--------P                   --------->MYB52(1)                        <---------ARR14(2)      ---- --------TOE1(3)          <----------ID1                                 <---------ARR11(3)      <--- ---------RAV1(2)       ---------->DOF2   ---------->DOF2                --------->ARR14(2)      <--- --------TOE2(3)   ----------->GT1<-----------HVH21               <----------ARF1               <----   tcaggttggttctgccatagaaggttaaaagacaaacgtcatgtaaaagaagatgggaatgccattgggagccaagatcggtcaagcgttgttcttcagg  1425900        <---------ZAT18        --------->ZAT18       --------->ALFIN1 ==========================HOX2a_HOX2a --------ANAC46 ---->ZmHOX2a(2)                                  --------->ATHB12                        <---------- ==HOX2a_HOX2a                                   <---------YAB1                           <----------DOF2 ----->ARR14(2)             --------->ALFIN1    <---------GLK1(2)                         ----------- ==HOX2a_HOX2a         <-------TEIL        --------->MYB52(1)                            <----------- ----->ARR11(3)      <---------ARR14(2)--------->ANAC58                       ---------->DOF2 ------ARR14(2)      --------->ARR14(2)--------->ANAC58            <---------STY1(1)     <----------- ------ARR11(3)     <------ZmHOX2a(1)---------->DOF2           --------->ANAC58     ---------->DOF2 --ZmHOX2a(1) ----------->HVH21<---------------AtSPL8          --------->ANAC58    <---------WRKY12   atcgtggaagtgggcttcgacaggattcatgtggtagtacaaagcaaacggattattggaaccccaagcctagggaagttgaaagtcaaaggctttatat  1426000                                                        <-----------ARR10                                                        --------->GLK1(2)                                                        --------->ARR11(3)                                                 <---------ANAC55(1)                                                 --------->ANAC55(1)                                                 <---------ANAC58                                                 --------->ANAC58                                                 <---------ANAC55(2)                                                 --------->ANAC55(2)                                                 --------->ANAC58                                  --                                                 <---------ANAC46                                  <-                                                 <---------ANAC58                                  >>                                  ------>ZmHOX2a(2)    <---------GLK1(2)                      -------                        <---------ARR11(3)  --------->ATHB12                                  -------                        --------->ARR11(3)  <---------ICU4                                    <------ --------->GLK1(1)--------------->AtSPL8    <--------HAHB4                                    <------ <---------GLK1(1)<---------------AtSPL8   <---------YAB1                          <---------HSFB2a(2) -----AGL15       <---------------AtSPL3   <---------ATHB12                    --------->ARR14(2)  -- ---->AGL15      <---------ARR11(3)        --------->ICU4                      <---------GLK1(1)----- ------AGL2      --------->ARR11(3)   <---------At4g35610               --------->ICU4      --------- ------AGL3    <---------YAB1 <---------YAB1--------->YAB1            ---------->DOF2  <---------ANAC46   gggaaatgctgatggtgaagatagtacatcttctgatcgtagctcatcattacgtaagaatcttgtctctagcaaagatggaattcgcgatgtggaaagt  1426100  Previous    Next  AGI:  At4g03250.1    Description:  homeobox-leucine zipper family protein. similar to HB-1 (homeobox-1), transcription factor [Arabidopsis thaliana] (TAIR:AT1G28420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16845.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Homeobox; (InterPro:IPR001356) Range:  from: 1425622    to: 1427744    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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