Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                            --------->ANAC58                                            --------->ANAC58                                           --------->RAP2.6(3)                                           --------->SPL7                                         <---------SPL7                                         --------->LBD16                                        --------->HSFB2a(2)                                        <---------HSFB2a(2)                                       <---------LBD16                                    <---------GLK1(1)                      <---------HSFB2a(2)        ------>ZmHOX2a(1)      ---------->DOF2<------NtERF2                --------->HSFB2a(2)       --------->TOE2(3)     <---------RAP2.6(3)               <----------DOF2       --------->TOE1(3)    --------->RAP2.6(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          ------      <---------ICU4   --------->At4g35610 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      ---------->DOF2 ---ANAC58             <---------At4g35610<---------SPL1(1)  --------->At4g35610 --------->ARR11(3) ---ANAC58 <-----------------AGL1   --------->GLK1(1)        <---------At4g35610 <---------ARR11(3)   gacgataatccttatcggaagaggcagaagccgaaaagaattccggacggcatagtgattttcagctttctctctctctcgaagattttaaagagggaaa  1373900                                  --------->AHL20(1)                                  <---------AHL20(1)                                  --------->ARR11(3)                                  <---------ARR11(3)                             ----------->GT1                                                      ===                             <---------ZAT6                                                       <--                           ----------->GT1                                                        <--                        --------->YAB1                                                           <---                      <---------AHL20(2)             --------->AHL20(1)                         -----                      --------->AHL20(2)             <---------AHL20(2)                         -----                      <---------YAB1   --------->AHL20(2)                                       <---- ----------->GT1     --------->YAB1--------->AHL20(2)--------->AHL20(2)----------->GT1          ----- ---->DOF2           --------->TOE2(3) <---------AHL20(2)            ---------->DOF2            <----   agagagagaaaacatggattcaatattaatagtgaaaatatttatatatccaaaataaaatgtcaatttgacaaagaaaaaaatcaaaaaatcaagtaga  1374000                         ------->GAMYB                         --------->AtMYB61                        <---------MYB52(2)                        <---------MYB55(2)                        --------->MYB46(3)                       --------->ANAC58                       --------->ANAC58                       --------->ANAC46                      ------->GAMYB                     <---------MYB111(2)                     <---------MYB55(2)                <-----------TGA1     <---------AHL20(2)                <-----------HVH21    --------->AHL20(1)               --------->ANAC46     <---------AHL20(2)               --------->ANAC58  --------->WOX13(1)               --------->O2 --------->MYB46(3)               =============================================bZIP_DOF               <---------TGA1a--------->ANAC58               --------->TGA1a--------->ANAC58               <---------O2 <---------MYB111(2)               --------->bZIP60(2)  --------->AHL20(2)             <---------ALFIN1------->GAMYB          --------->ANAC46  <---------MYB55(2)           <---------TOE1(2) ==================================================================================================== ---------------AGL3 --------->MYB46(3)              <---------TOE2(3)                            --- -----TEIL--------->ANAC58  <---------MYB111(1)      <---------YAB1                              ---- ---ZmHOX2a(2) --------->ANAC58--------->MYB46(3) --------->ICU4                     <---------ANAC55(2) ---->AGP1--------->ANAC58 ------>MYB46(1) <---------ANAC58                          --------->ANAC55(2) ---->ARR11(3) ===============MYC_MYB--------->AHL20(2)  <---------TOE2(2)    ----------->GT1   <---- -----ARR11(3) ======================MYC_MYB     <----------DOF2         <----------DOF2     <------- ---->ARR14(2) ==================MYC_MYB   <---------ANAC58           <---------ARR11(3)     -------- -----ARR14(2)------>NtERF2------>MYB83   --------->ATHB12            --------->ARR11(3)    ---------   tccataaatgaaacgccacgtcaacaaccaacaaccaattaaattgagtggcattatcgtagatttagagaagttctttggggtaaaacgtgattccaat  1374100                                                             <----------DOF2                                                            <---------ANAC46                                                            <---------ANAC58                                                         <---------MYB52(1)      --------->TOE2(3)                                 <-------GAMYB     --------->REM1(1)                                 <---------MYB46(3)      <----------ID1    <-------TEIL                                   --------->ZAT18        ------->GAMYB ========MADS_MADS                                 --------->WRKY12      --------->MYB46(3) ------->DOF2                 ----------->GT1      <---------ZAT14      ------>MYB46(1) ----->YAB1         --------->ARR11(3)             --------->ZAT14      ------>MYB83 -----ATHB12        <---------ARR11(3)             --------->WRKY38(1)  -------->P --------AGL15   --------->AHL20(2)               --------->ALFIN1--------->GLK1(1) ------->AGL15   --------->YAB1 ----------->GT1--------->ATHB12   <---------GLK1(1)                -- -------->AGL3  <---------AHL20(2)            --------->ICU4<---------ANAC58 ---------->DOF2       --   aaaagctacattagataaataatatccctagagggagaaaattttgaaatgagtggaccgttgctttgaaatccaaccaaaaagacaaaaatttcaaaac  1374200                    <---------ANAC55(2)          <---------YAB1         <---------AHL20(2)         --------->AHL20(2)                              <---------GLK1(2)         <---------AHL20(1)                           <---------HSFB2a(2)         --------->AHL20(1)           ---------->DOF2 --------->HSFB2a(2)    --------->AHL20(1)  ---------->DOF2         <---------DAG2 ---->MYB46(1)<---------AHL20(2)  ---------->DOF2     --------->HSFC1(1) ---->MYB83  --------->AHL20(2)--------->AHL20(2)<----------DOF2                 *TSS          >>>>>>   caaacatatattatattaaatcacataaaagaataaaaaagaaagagaaaccttttcgagaatttcaaaaatcaaattcacttccatagagagagaagaa  1374300                                                                                                    <                                                                                                    -                                                                                                    <                                                                                                    <                                                                                                    <                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                <----                                                                                                <----                                                                                                <----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                              <------                                                                                             --------                                                                                      <---------DEAR3(1)                                        <---------ARR11(3)                         --------->DAG2<---                                        --------->GLK1(2)                --------->ICU4     ---------                                        --------->ARR11(3)             --------->YAB1 --------->ALFIN1                               <---------HSFB2a(1)                    <---------ZAT6 <---------LBD16-                               --------->HSFC1(2)            <---------ANAC58     XXXXXXXXXXXXXXXXXXX                               <---------HSFC1(2)            <---------bZIP60(2)  ---------->DOF2----                               <---------ZAT2                <---------ANAC58    --------->MYB52(1)<-                               --------->ZAT2 --------->YAB1 <---------ANAC46    ---------->DOF2<----                               --------->At4g35610           <---------O2<---------YAB1    <-------GAMYB                               <---------At4g35610        ----------->TGA1--------->YAB1 <---------AtMYB61    ---------->DOF2           --------->GLK1(2)           ----------->HVH21 <---------YAB1<---------MYB46(3) >>>TBF1         ---------->DOF2--------->TOE1(2)         <---------ATHB12<---------ICU4<------NtERF2   gaagcacaaagtccagagagaaagagagagagaagctgcgaaaatctttcatagttctcaatgacggggctagtgatgatgactaaaggcggaggttgcg  1374400      <------ZmHOX2a(1)   <------NtERF2 <---------ANAC46 <---------DEAR3(1) --------->ALFIN1 ---------ABI4(1) -------->At4g35610 ---------At4g35610 ------NtERF2 ---------LBD16 --------ERF1 --------ORA47(2) --------DEAR4(2) ---->NtERF2 --------RAP2.3(1) --------RAP2.6(1) --------ATERF1(1) -------DEAR3(1) ------>DEAR3(1) -------RAP2.3(2) -------ATERF1(2) -------RRTF1(3) ------>ALFIN1 -------ANAC46 -------RAP2.6(2) -------RRTF1(2) -------RAP2.3(3) ------>ATERF1(2) -->NtERF2 ---NtERF2 -----ERF1 -----RRTF1(1) -----RAP2.3(1) ----RRTF1(3) ----ANAC58 ----ANAC58 ----DEAR3(1) ----ANAC46 ----RRTF1(2) ----RAP2.6(2) ----RAP2.3(2)                           <------ZmHOX2a(1) ----RAP2.3(3)                        <------ZmHOX2a(1) ---LBD16                          <------NtERF2                                                    - ->ALFIN1--------->DAG2          <---------ANAC46                       ------->GAMYB               < ------ABI4(1)                 ------->GAMYB >>>>>>>>>TBF1             <------------AtMYB77         - >ALFIN1---------->DOF2       <---------DEAR3(1)                    --------->MYB46(3)              - -------->ATERF1(1)         --------->MYB52(1)                    ----------->RAV1(1)              <- XXXX>MIR404        ----------->GT1--------->ATERF1(1)          --------->At4g35610               --- ----->ATERF1(1)   <------ZmHOX2a(1)--------->ALFIN1        --------->GLK1(2)                    ---- --------RRTF1(1) ----------->GT1<---------DEAR3(1)    --------->At4g35610                      ----- -----ATERF1(1)<------ZmHOX2a(1)<---------LBD16 >>>>>>>>>TBF1  --------->ANAC46               -------   gcggcggaggaaaaggaggaaggagaaaatcaacggcggaggaggaagaagaagaagagcagaatcagcaacaactgtctcttgttgagtttctcttaac  1374500         <---------ARR14(2)                                 <---------DEAR3(1)        <---------CCA1(2)                          <---------ANAC46    <---------ANAC58                               <---------DEAR3(1)    <---------ANAC46                              <---------LBD16    <---------ANAC58                              --------->ATERF1(1)    ----------->GT1           <---------ETT(2)   <---------ATERF1(1)   ------>NtERF2            --------->REM1(2)    <---------RAP2.3(1)             <-------TEIL <------NtERF2              --------->ZAT14      ------>NtERF2<------NtERF2     <---------MYB52(1) --------->ATERF1(1)       --------->ALFIN1     <---------RAP2.3(2)           --------->DEAR3(1) ----->NtERF2            <---------ANAC58       <---------RAP2.3(3)         --------->LBD16 ---------At4g35610      <---------ANAC55(1)    <---------RRTF1(3)          ------>NtERF2          <- -------->At4g35610      <---------ANAC58       <---------DEAR3(1)          <------NtERF2          <- -------->ABI4(2)        <---------ANAC46      --------->ATERF1(1)      <---------SPL7           <--- --------DEAR3(1)   <---------ANAC58          <---------ATERF1(1)      <---------ANAC58         ----- ------>ZAT18       <---------ANAC58--------->MYB46(3)     <---------LBD16--------->SPL7       <----- --->GAMYB         --------->MYB52(2)------->GAMYB<------NtERF2        <---------ANAC58       <------ ---->ANAC46   <---------MYB46(3) ----------->RAV1(1)<------NtERF2  --------->GLK1(1)         ------- -->MYB52(1)<-----------RAV1(1)   --------->MYB52(1)--------->LBD16 <---------GLK1(1)        <-------   ggcgctgcgtaaatctgtggtttcttgccgtgtagacaacagacaagacgacggcggagtaggcggagggatttcgtccgccgttcatcacatggagatc  1374600       --------->MYB46(3)     ----------->RAV1(1) <------MYB83 <------MYB46(1) -------P --------MYB52(1) ------MYB46(3)              --------->ANAC55(2)                                         ------>ZmHOX2a(2) ->ZmHOX2a(2)                <---------ANAC55(2)         <---------ANAC58               <------ZmHOX2a(2) -ZmHOX2a(2)          --------->ZAT14                    <---------ANAC58              --------->ARR11(3) ---ARR14(2)        --------->bZIP60(2)               <----------DOF2                  <---------ARR11(3) -->ARR14(2)        --------->ANAC46                 <---------ANAC58                 <---------GLK1(1) --GLK1(1)        <---------ALFIN1 --------->TOE1(2) <---------ANAC58       <----------DOF2   <------   ggttggccaacaaatgttcgacacatcactcatgtaacattcgatcgattccatggctttcttggtctccctcacgagcttcaagttgagatcccatgtc  1374700                                                           ------>ZmHOX2a(2)                                                          <---------At4g35610                                                          --------->At4g35610                                                         <---------ARR11(3)                                                         <---------ARR14(2)                                                         --------->ARR14(2)                    <-----                                             --------->GLK1(2)                           <---------GLK1(2)                                             --------->ARR14(2)                 <---------AHL20(2)  <       <---------ZAT6                  <----------DOF2   <---------AGP1        --------->AHL20(2)   <    --------->STY1(1)         <-----------GT1<---------ARR14(2)       <---------At4g35610--------->ARR14(2) -----HVH21                   --------->ZAT6<---------GLK1(2)     <---------REM1(1)      <---------ARR14(2)   gagtccctagtgcaaggtaatctctcaaaatttcactactgctttagaatctgaaactggatctgaaattgtagcttcttatttaatggtggattctctt  1374800  Previous    Next  AGI:  At4g03100.1    Description:  rac GTPase activating protein, putative. similar to rac GTPase activating protein, putative [Arabidopsis thaliana] (TAIR:AT2G46710.1); similar to rac GTPase activating protein 3 [Lotus japonicus] (GB:AAC62626.1); contains InterPro domain RhoGAP; (InterPro:IPR000198); contains InterPro domain PAK-box/P21-Rho-binding (InterPro:IPR000095); contains InterPro domain Rho GTPase activation protein; (InterPro:IPR008936) Range:  from: 1374281    to: 1376231    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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