Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->AHL20(2) <---------HSFC1(1)                                   <---------AHL20(2) <---------HSFB2a(2)                                  <---------ARR11(3) --------->HSFB2a(2)                                  --------->AHL20(1) --------->HSFC1(1)                                   --------->ARR11(3) -------YAB1                                    --------->TOE2(3) ----AHL20(2)                                 --------->ARR11(3)    --------->AHL20(2) ----YAB1                                     <---------ARR11(3)    <---------AHL20(2) --CCA1(1)                                   <---------CCA1(2)<---------AHL20(2) --RVE1(1)                               <----------DOF2  --------->AHL20(2)      <---------ARR11(3) >ARR11(3)       <---------YAB1          <---------DAG2  <---------AHL20(2)    ------>ZmHOX2a(1) -ARR11(3)  ----------->GT1           <-----------GT1 <---------AHL20(1)  <-----------GT1 -ARR14(2)  <---------ZAT6       ----------->GT1--------->YAB1--------->AHL20(2) <---------CCA1(2)   attctagaaaataagtgttaatattagagtttaaaaagtttaactttatatcttaatatattatttatatttatatttatcctatatctatataagagaa  1358000                                                                                     <---------TOE2(3)                                                                                    --------->YAB1                                                                                 --------->YAB1                                                           <---------YAB1       --------->AHL20(2)                                   <---------AHL20(2)     <---------AHL20(2)    <---------AHL20(2)                 <---------------AGL15                    --------->AHL20(2)   --------->AHL20(2)                 <---------YAB1   --------->AHL20(2)    <---------YAB1       <---------AHL20(2)                 --------------->AGL15                 <---------AHL20(1)   <---------AHL20(2)              <---------YAB1     <---------YAB1        <---------AHL20(2)   --------->AHL20(2)           <---------AHL20(2)  --------->YAB1        <---------YAB1        <---------YAB1  <---------ANAC58           <---------YAB1     <---------AHL20(2)     <---------AHL20(2)  --------->YAB1    <---------ANAC46          <---------AHL20(1)  <---------YAB1  ----------->GT1           <---------YAB1<-----------RAV1(1)    ----------->GT1 <---------YAB1<---------AHL20(2)<---------AHL20(1)  <---------AHL20(2) <---------ANAC58   tgtaagttgtaatattattcttataagagtatattataaatttgtaagttgtaatattatttttataagagtatattataaatttataatgttgcttaaa  1358100                                                   <------ZmHOX2a(2)                                                  --------->ARR14(2)                                                --------->DEAR3(1)                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                                --------->MYB46(3)                               --------->YAB1 ------>NtERF2                                <---------YAB1                              <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->YAB1                           <---------AHL20(2)--------->DEAR3(1)                    <---------ATHB12                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                        --------->WOX13(1)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  ---------->DOF2      --------->GLK1(2)             <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<------NtERF2                  --------->ARR11(3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------ARR14(2)          <---------ARR11(3)-----          <----------DOF2 --------->AHL20(2)--------->MYB46(3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)      <---------ABI4(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   cacttatgtgttctttacgctcatcgaattttatcatggtatcagagccaccgatccttgaaagcccatgttaaacccaaaatctatcatggtatgagag  1358200                                                                                                -----                                                                                                -----                                                                                                <----                                                                                                -----                                                                                     <---------YAB1                                                                                  --------->ICU4-----                                                                                  <---------MYB52(1)                                                                                 <-------GAMYB ======                                                                                <---------MYB46(3)                                                                                --------->MYB52(2)                 ---------->DOF2         ----------->HVH21                      ----------->GT1------          <---------YAB1            --------->ANAC58                         ------->GAMYB     ------        --------->YAB1              --------->ANAC58                      --------->MYB52(1)   ------       <---------YAB1               <---------ALFIN1                   <---------ANAC55(2)     ------      <-----------GT1     <---------ARR11(3)                           --------->ANAC58        <-----    <---------AHL20(2)    --------->ARR11(3)                           --------->ANAC55(2)<---------ICU4    --------->AHL20(2)   --------->RVE1(1)                             --------->ANAC58   <---------MYB46(3) ---->ZAT18<---------ICU4--------->CCA1(1)                         <---------At4g35610<---------AHL20(2)   cccaaatttatcatcattttaaagaaaaaatctcagacacacactgacacacatatacaacctgtatgcagcaacgtaacggtcgttattaatggttacc  1358300        <---------MYB52(2)    --------->AHL20(2)        --------->MYB46(3)    <---------AHL20(2) ---->YAB1           <-----------GT1 ---->TOE2(3)     --------->YAB1 -----------AGL15 -------->ATHB1 ---->TOE1(3)     <---------ICU4 ---------->AGL15 <--------HAHB4 =============================================================MADS_MADS ----------->AGL3 --------->ATHB51                              ----------->RAV1(1) ----------->AGL2--------->ICU4                         <---------GLK1(1) ----------->AGL1<---------ATHB12             <---------------AGL15 ----------->AG  <---------ATHB51             --------------->AGL15   --------->YAB1<----------DOF2 ----YAB1------->GAMYB       --------->AHL20(2)     --------->HSFB2a(2) --------->ICU4   ataaatgtcaacaaactcaattattacatcatttatttgtctaaactactacttatagaattcttccaacaaaaatgatttttagtcttttaaaccaaaa  1358400                                                                                  --------->LBD16                                                                                 --------->LBD16               --------->TOE2(3)                                            <---------ZAT2               --------->TOE1(3)  --------->ANAC58                          <---------At4g35610          ---------->DOF2         --------->ANAC58                          --------->At4g35610   --------->ANAC58             *TSS                                  <----------DOF2   --------->ANAC58           --------->GLK1(2)              ------>ZmHOX2a(1)  <---------LBD16  ---- ---------->DOF2  --------->AHL20(2)                      ------>ZmHOX2a(1) --------->ZAT2 <---------GLK1(1)   tcacaaagcaaaaaaagccttaaaattctcagaatcaagaaatggattcagactttgttcctccttctgtttcttttcagctcccggttatcgatttctc  1358500                                                                                     --------->HSFB2a(1)                                                                                     <---------HSFB2a(1)                                                                                     <---------At4g35610                                                     ------>ZmHOX2a(1)      <---------MYB46(3)                    <---------At4g35610    <---------ZAT2                  <---------MYB52(1)                    --------->At4g35610    --------->ZAT2  --------->ARR11(3)        --------->ZAT2                 <------ZmHOX2a(1)         --------->At4g35610--------->HSFB2a(2)    <---------HSFC1(2)          ---------->DOF2                  <---------At4g35610<---------HSFB2a(2)    --------->HSFC1(2)       --------->TOE1(3)    --------->ALFIN1        --------->TOE2(3)     <-------GAMYB      --------       --------->TOE2(3)---------->DOF2  <-----------RAV1(2)  <---------HSFC1(1)     --------->At4g35610 ------->HVH21<---------LBD16         ----------->HVH21---------->DOF2  <---------TOE2(3)  <---------   tgaccaaaacctaaaaccaggaagctcaaagtgggatgaagtgacagctgatgtccttaaagctctagaagactacggttgtttcgaagcttcctttgac  1358600                                                                                 ------->MYC3                                                                                 <-------MYC3                                                                                <---------ANAC58                                                                                --------->O2                      ------>ZmHOX2a(2)                                         <---------ANAC55(2)                     <------ZmHOX2a(2)                                ------>MYB46(1)                    <---------AGP1                                    ------>MYB83                    --------->ARR11(3)                                --------->MYB52(1)                    <---------ARR11(3)                   <---------ANAC58       =====================                    --------->ARR14(2)                   <---------ANAC58       <---------O2                    <---------ARR14(2)                   <---------ANAC46       --------->ANAC55(2)           --------->At4g35610                           ----------------->AGL1 <---------ANAC58       --------->ALFIN1                       <----------DOF2       --------->AtMYB61      --------->At4g35610                     ============================================bZIP_DOF  <-----------HVH21 --------->AGP1           <---------DAG2         <---------MYB59 --->HVH21 <---------At4g35610             --------->ARR11(3)       --------->MYB46(3) -DOF2<---------At4g35610                  <---------ARR11(3)   <---------ETT(1)<---------TGA1a    <-   aaattgtcagtggagcttaatagatctgtttttgaagctatggaagaccttttcgagttgcctattccgaccaaacagagaaacgtgtcttcaaaaccct  1358700                     <----------DOF2                    <---------ICU4                  --------->GLK1(2)                  <---------ARR11(3)              --------->YAB1                                               --------->ZAT14         <----------DOF2                                                   <---------ZAT14         --      <---------ARR11(3)                                                  <----------DOF2         ---      --------->ARR11(3)                                              --------->MYB46(3)          <--     --------->GLK1(1)                      <---------ICU4         <---------WRKY38(1)      <--------     <---------GLK1(1)                      --------->YAB1         <---------WRKY12         <--------     <---------CCA1(2)                     <---------ATHB12        <---------WRKY45   <---------MYB52(1) ===================bZIP_DOF           <------ZmHOX2a(2)      ---------->DOF2 --------->ANAC46   <--- --------AtLEC2 --------->ICU4    <---------LBD16   <---------ATHB12<---------DOF5.7(2)     <--------   tccatggatatctttgtcataatctttacgagagtttggggatcaatgatgccaatgttttggagaaagtcaacgactttactcaacagttatggcctga  1358800                        ------->TEIL                     --------->ANAC58                     --------->ANAC58                                                             <-- ------->TOE1(2)    <-------TEIL                                                           --------->ANAC55(2) ------>ATHB12   <------MYB46(1)                                                           --------->ANAC46 -------ICU4     <------MYB83                                                              --------->ANAC58 -ANAC46        <---------------AtSPL8                                                     --------->ANAC58 -ANAC58        <---------------AtSPL3                   <-------TEIL                 <---------YAB1 ------YAB1     --------->MYB59   --------->WOX13(1)     --------->ZAT18         --------->ANAC55(2) -ANAC58        --------->MYB111(1)             <----------DOF2                <-----------GT1    ---   tcatgggaacaagagtattaggtacgaacatgaagtcaatccatttaggccttttaatgtgcattacaaaatttttagttttcacttgattatacgcatt  1358900  Previous    Next  AGI:  At4g03070.1    Description:  AOP1 (2-oxoglutarate?dependent dioxygenase 1.1); oxidoreductase, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors. similar to 2-oxoglutarate-dependent dioxygenase, putative [Arabidopsis thaliana] (TAIR:AT1G52820.1); similar to 2-oxoglutarate-dependent dioxygenase [Arabidopsis halleri] (GB:AAL14687.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123); contains InterPro domain Isopenicillin N synthase; (InterPro:IPR002283) Range:  from: 1358432    to: 1359698    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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