Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           <-------TEIL                                                                       <---------ARR14(2)                                                                       --------->ARR14(2)                                                                     ----------->ARR10                                                            ------>ZmHOX2a(2)                                                            ----------->RAV1(2)                                                           <------ZmHOX2a(2)                                                          --------->ARR11(3)                                                          <---------ARR11(3)                              ------>ZmHOX2a(2)           <---------ARR14(2)                     <---                        --------->ANAC58                 <------ZmHOX2a(1)                       <---                        --------->ANAC58                <---------HSFB2a(1)                     <----                        --------->ANAC55(2)             <---------HSFC1(2)           <---------ANAC58                        <---------O2                    --------->HSFB2a(1)          <---------ANAC58                       <---------LBD16                  --------->HSFC1(2)       --------->At4g35610        ------>ZmHOX2a(2)     ==================================HOX2a_HOX2a---------->DOF2   <-------       <------ZmHOX2a(2)--------->O2         <------NtERF2--------->ARR14(2)     <---------GLK1(1) <-       --------->GLK1(1)<---------ANAC55(2)<---------DEAR3(1) ------>ZmHOX2a(1)  --------->GLK1(1) <- ------ZmHOX2a(1)   <-----------HVH21 ---------->DOF2  <---------TOE1(2)--------->CCA1(2)    <-------   gaggaagcgatctccaagagagagtcacgggatcgaagagaaaaggaggcgaaatcgaaggatcctgagggaagatacaaaggagatgcgagagattgtt  1337000                                                                --------->ATHB12                                                           --------->SPL7                                                         <---------SPL7      <-------GAMYB                                      --------->ZAT18     <-----------RAV1(1)                                <---------ANAC58    --------->ATHB12 ---MYB83                          <---------TOE1(3)    <---------ANAC58   <-------TEIL ---MYB46(1)                       <---------TOE2(3)   <---------------AtSPL8 -----AtMYB61            ----------->GT1               --------------->AtSPL3 --MYB46(3)              <---------ANAC46           ---------->DOF2       <--------P --------REM1(1)        <------NtERF2              <------ZmHOX2a(1)<-----------GT1                 = ----------RAV1(1)    <---------ANAC46   --------->HSFB2a(2)   <---------YAB1                 ------- ----RAV1(1)         <---------LBD16     <---------HSFB2a(2)   --------->ICU4      --------->CCA1(2)<   ggtgttgctgttgtctctgctatggcggagtgaaattagggttttggaagagaggaaagcgtaccatgatttacaggttgatttgatacgagagatgtga  1337100                                      <---------MYB46(3)                                     <---------TOE1(2)                                    <---------MYB52(1)                               <---------TGA1a                               ============MYC_MYB                               <---------bZIP60(1)                               --------->bZIP60(1)                               --------->TGA1a                               --------->O2                           ------>ZmHOX2a(2)                               <---------O2--------->ANAC58   --------->ZAT2                        <    <----------ID1          ----------->HVH21             --------->WRKY18(1)                       - ========================================MYC_MYB       <---------TOE2(3)                     -------- -->ALFIN1        --------->GLK1(2)<-------GAMYB       <---------TOE1(3)       <---------HSFC1(2)   < --------P  <------ZmHOX2a(1)------>NtERF2 --------->ANAC58   <---------ZAT2   --------->HSFC1(2)   -   gggtaagggacgaaggagagaatcagtctcccgacgtcgttggataagcctggaattaaggtcaagcttggatcgattcgaagcttaggcctaaaaaacg  1337200                                                                                        <---------HSFB2a(1)                                                                                        --------->HSFC1(2)                                                                                        <---------HSFC1(2)                                                                                    ----------->ARR10                                                                                    --------->ANAC58                                                                              <------NtERF2 <--------                                                                              <---------LBD16------>NtERF2                                                                              --------->ATERF1(1)                                                                             ------>NtERF2 <---------LBD16                                                     --------->ARR14(2)      <---------ATERF1(1)          --------->DEAR3(1)                         <---------ARR14(2)      <---------DEAR4(2)         <---------------------WRI1         ------>NtERF2                   <---------ATERF1(2)        ------>NtERF2                      ----------->HVH21                <---------DEAR3(1)       --------->DEAR3(1)                ------->GAMYB                      <---------RAP2.6(2)  ------>ZmHOX2a(2)                      --------->ANAC46                   --------->ATERF1(2) <------ZmHOX2a(2)                      --------->MYB46(3)         --------->ATHB12 --------->ANAC58- ---------ARR11(3)                      <------------AtMYB77      --------->ICU4 <------NtERF2     <- -------->ARR11(3)                     <---------At5g28300  --------->At4g35610 --------->LBD16    -- ->MYB52(1)------>NtERF2              <---------ARR14(2)    <------NtERF2  --------->RAP2.6(3)     <- ---------ARR14(2)                    --------->ARR14(2)    <---------At4g35610<---------ANAC46  ---- -------->ARR14(2)              --------->ZAT6<---------ANAC46    <---------YAB1------>NtERF2--------   aagatcgcgacgacgacgaagacgatgaagacgaacactgtaaccgcgacgggaatataggcagaggcatgattcaggccggcgggaagaaactccggcg  1337300                              <-----------HVH21                              <-----------TGA1      <---------WOX13(1)  <---------GLK1(2)    --------->ATHB12      <---------ARR14(2)   <---------YAB1         --------->ARR14(2) -DEAR3(1)             --------->ANAC58 -------->GLK1(2)      --------->ANAC58 --------ARR11(3)    --------->MYB52(1)              <---------GLK1(2) ------->ARR11(3) <---------ATHB12        <---------ARR11(3)                --------->GLK1(2) --------GLK1(2)--------->WOX13(1)        --------->ARR11(3)        *TSS ------------>CBF           - ------->ARR10<------ZmHOX2a(2)         ----------->ARR10   --------->GLK1(1)                       - ->LBD16   ------>ZmHOX2a(2) --------->YAB1<------ZmHOX2a(2)<---------GLK1(1)                     ---   agattttgattgatcgatcaatgaaacggaatcgtcatggagaagatcagagactgattctgaattctgagacagaacaatctggttttgaaatttgaag  1337400                                           --------->ALFIN1                                          ------->MYC3                                          <-------MYC3                                          <-------MYC2                                          ------->MYC2                                          ------->MYC4                                          <-------MYC4                                          ------->PIF5                                          <-------PIF5                                         --------->O2                                         --------->TGA1a                                         <---------TGA1a                                         <---------PIF3(3)                                         ==============MYC_MYB                                         --------->PIF3(3)                                         <---------O2                                       <---------ALFIN1                                      --------->DEAR3(1)                                      --------->MYB46(3)                                <-----------GT1                               <---------AHL20(2)                               --------->AHL20(2)                              --------->AHL20(2)                              <---------AHL20(2)                                      <---------ICU4                           --------->AHL20(2)                                     <-----------GT1  ------------>CBF         <---------AHL20(2)          <------------CBF --------->CCA1(2) -------->ANAC58          --------->AHL20(2)          --------->ATHB12 <---------ARR14(2) -------->ANAC58          <---------AHL20(1)         <---------YAB1    --------->ARR14(2)<-----------GT1 ------>MYB52(1)          <---------AHL20(2)  <--------P<---------WOX13(1) ----------->GT1   aaacgacaattttgttttggctctgtaattaatttaatcacccacgtggtagtttatgattggctgagacatggatatggttaattactaattactaggc  1337500                                                                       <---------ARR14(2)                                                                   ------>ZmHOX2a(2)                                                               <---------YAB1          <----------DOF2                                ----------->GT1              --------->CCA1(2)  <---------ARR14(2)    ----------->GT1  ------->TEIL                       ----------->GT1--------->ARR14(2)   ttcgactagtcaaaatccaaatgtatgttttgaattgtgaaacagatttagatgtataatgtgatatgatccgaatttggagtattgggctttctcttct  1337600                                                                               <<<<<<<<<TBF1                                           --------->YAB1                    <-----------------------                                    --------------->AGL15               --------->ARR11(3)                                    <---------------AGL15               <-----------ARR10                                   ----------------->AGL1               <---------ARR14(2)      --------->At4g35610          ----------------->AG                 --------->ARR14(2)   <-------      <---------ZAT2               <-----------------AGL1               <---------ARR11(1)   <-------      <---------At4g35610       <----------DOF2                         <---------ARR11(3)  <--------      --------->ZAT2            <---------GLK1(1)                      <---------CCA1(2)  ---------->ID1      ----------->RAV1(2)   --------->MYB59--------->TOE2(3)           <---------GLK1(1) <-----------GT1 ----------->HVH21        <<<<<<<<<MYB98  <---------YAB1            <------NtERF2   <----------DOF2<-   tatttgacagctgaagtattgggcttaagttaggctttcccattatgttaatggtttaagcccatttggctgcatatcttcttcttctttttctcctttt  1337700                                 --------->ANAC55(2)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               --------->CCA1(2)        xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                              --------->ARR14(2)   ----------------->AGL1                              <---------ARR14(2)   <-----------------AGL1                             xxxxxxxxxxxxxxxx>smallRNA(i)     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                             xxxxxxxxxxxxxxxx>smallRNA(s)--------->RAP2.6(3)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      <---------ANAC46           --------->AtLEC2                      <---------ANAC58         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                      <---------ANAC58      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <-------TEIL xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     xxxxxxxxxx                  --------->ARR11(1)  <----------DOF2  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <xxxxx                  <---------GLK1(2)   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                  <---------At4g35610    <-----------GT1--------->ARR14(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             ---------->DOF2 -ANAC81          --------->ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(s)                     --------->ANAC58 --DAG2           <---------ARR14(2)xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---DOF2------>ZmHOX2a(1) --------->ALFIN1  --------->ANAC46------>NtERF2            --------->ANAC58 ----------------ANAC81 --------->ALFIN1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC58 ---------DOF2  ----------->ARR10<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->ANAC58   --   tctttgtttcctcttatttagattcggtgtgggatacgggctttgccctccatgcccaattcggcctaaacacaaatagaccaagtcaagaaagctcata  1337800                      --------->MYB52(1)                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                 --------->ANAC46                --------->YAB1                                        --------->ANAC58                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                 --------->ANAC58             <xxxxxxxxxxxxxxxxsmallRNA(i)                          ----------->HVH21            <xxxxxxxxxxxxxxxxsmallRNA(s)                 <---------At4g35610      <---------ZAT2           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->ZAT2         --------->ATERF1(1)         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------->At4g35610    <---------ALFIN1        --------->MYB46(3)                               <---------ZAT14        ---------->CDC5       --------->RAP2.6(3)         <---------ICU4      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      --------->MYB52(1)           <xxxxxxxxxxxxxxxxsmallRNA(s)   <-----------HVH21      --------->ARR14(2)    <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ZAT14        <xxxxxxxxxxxxxxxxxxxx      <---------ARR14(2)--------->MYB46(3)          ----------->HVH21--------->RAP2.6(3)     <xxxxxxxxxxxxxxxxsmallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(s)   --------->ANAC46 --------->ZAT2   <---------------AtSPL3------->GAMYB             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->AHL20(2) xxxxxxxxxxxxx>smallRNA(i2) <xxxxxxxxxxxxxxxxsmallRNA(s) <---------ZAT2      ------>NtERF2          - xxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1     <-----------HVH21 xxxxxxxxxxxxxxxx>smallRNA(i)  xx -------->DOF2 xxxxxxxxxxxxxxxxx>smallRNA(fl3) ------>NtERF2  ------>NtERF2--------->ATERF1(1)     xx   acaaagaagaacggcccatcagaacaacggcccatcagaatgactactcggcccatcacagctctgcccatcacggctcggcccagcccgataaattcag  1337900  Previous    Next  AGI:  At4g03030.1    Description:  kelch repeat-containing F-box family protein. Identical to F-box/kelch-repeat protein OR23 (OR23) [Arabidopsis Thaliana] (GB:Q0V7S6;GB:Q38891;GB:Q7DML4); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G63220.2); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT3G63220.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70682.1); contains InterPro domain Kelch repeat type 1 (InterPro:IPR006652); contains InterPro domain Kelch-type beta propeller (InterPro:IPR015915); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Range:  from: 1335729    to: 1337368    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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