Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->ATHB12 <---------YAB1 ------->YAB1 --------ICU4                                                            --------->YAB1     --------- ------>ICU4                                                            ------>MYB46(1)     <-------- -----ICU4                                                     --------->AHL20(2)           --------- --->ICU4           --------->AHL20(2)              --------->DAG2      ------>MYB83       <---------AHL20(2) -->AHL20(2)  <-----------GT1                      ---------->DOF2     ----------->RAV1(1) --------->AHL20(2)   attatgatttgtgatttcacgtttaaattttgttttgttagaaatctatttgataaagtagacgtttatataccaacataatcgtctaggtaattaaatt  1306100                                                              <---------AHL20(2)                                                             --------->AHL20(2)                                                             <---------AHL20(2)                                                          <---------ICU4                                                          -------->HAHB4                                                          <--------ATHB1                                                          --------->YAB1                                                          --------->ATHB51                                                          <--------HAHB4                                                         <---------ATHB51                                             --------->ANAC55(2)                   --------->AHL20(2)                                             <---------ANAC55(2)               <---------AHL20(2)                                <---------AHL20(2)       --------->ICU4        --------->AHL20(2)                              <---------AHL20(2)         <---------YAB1     --------->AHL20(2)      --------->ANAC46       <---------AHL20(1)          --------->AHL20(2) <---------AHL20(2) <----- >AHL20(1)                   --------->AHL20(1) <---------ARR14(2)         --------->AHL20(2) <------ -AHL20(2)                  <---------AHL20(2)  --------->ARR14(2) ---------->DOF2 <---------AHL20(2) >AHL20(2)           ----------->GT1    <---------ICU4 --------->YAB1     <---------YAB1      -------   agacatccacataacaaaatagcatgttatatatatttttaaaaatcacatattcgataataattaaataaaagttattaaaaaattaaaaatcaatata  1306200                                                                            --------->ANAC46                                                                  ------>MYB83                                                                --------->TOE2(3)                                                  --------->ARR11(3)        --------->ANAC58                        --------->ATHB12          <---------ARR14(2)        --------->ANAC58                        <---------ICU4            <-----------ARR10    <-----------GT1                        --------->ATHB51         <---------CCA1(2)------>MYB46(1)  <---------AHL20(2)   --------->ICU4        <-----------HVH21  <---------MYB111(1) --------->AHL20(2)    <---------YAB1        --------->TOE2(3)  <---------MYB59 ------GT1 <------ZmHOX2a(2)      --------->AHL20(2)            <---------MYB46(2)             <----- ---ARR11(3)         <---------ICU4<---------AHL20(2)         -------->P --------->MYB46(3)   <------ -->AHL20(1)        <---------YAB1<---------AHL20(2)          ------->TEIL------->GAMYB       -------   ctatttaatggcgatcaaaaacatcattatttgtttttaaatttcatcgtcaaatcttgccatctacctaatttaaccacacaaaaacatcatcaaatta  1306300                                                                                                    <                                                                                                    <                                                                                                   <<                                                                                                   --                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                   ------>NtERF2   <-                --------->AHL20(2)                                                <---------PCF2   --                <---------AHL20(2)                                                <---------PCF5   --      --------->YAB1   <----------DOF2                                     ---------->DOF2         -- ------>ZmHOX2a(1)<-----------GT1                                          ========================== ----ICU4    ------>MYB83                                           --------->MYB52(1)             -- ---ATHB51 <---------MYB59                                          --------->CCA1(2)<-----------RAV1(2) -->AHL20(2) ------>MYB46(1)                 ---------->DOF2    --------->YAB1 --------->ALFIN1    <-   ttcctgtataataccaaattaaactcttttgtccaaaacaatttcaaaaaagaaaactctgtggaataagaaacgggcaaagaggggccagaagtttagc  1306400    <---------At4g35610    <---------ZAT2    --------->At4g35610 --------->TGA2(2) -----------TGA1 -----------HVH21 <<<<<<<<AtbZIP1 ------->TGA1a --------O2 ------->O2                                             ------>ZmHOX2a(2) ------->ANAC58                                        <------ZmHOX2a(2) --------TGA1a                    --------->ANAC58    --------->ARR14(2) ------->bZIP60(1)                --------->ANAC58    <---------ARR14(2)        ------>MYB83 ------->ANAC46         <---------ICU4            --------->SPL1(2)             ------>MYB46(1) ------->ANAC58      --------->bZIP60(2)         --------->SPL1(1) <---------AHL20(2) ========bZIP_DOF    --------->REM1(1)       <------------------SPL14 <------------CBF ------->bZIP60(2) <---------ALFIN1          ----------->RAV1(2)   --------->AHL20(2)     ------>ZmHOX2a(1) --------bZIP60(1) ----------->RAV1(1)     <---------ALFIN1  ------------>CBF <---------MYB59     <--   cacgtcagctacaagagagtgccacatcatcaccataagcctctcccacctgtacggatccctcccaatataaattggaaccaaactctctcctcagaaa  1306500                                                                                              ------>NtERF2                                                                                             --------                                                                                             --------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                           --------->At4g35610                                                                                           <---------ATERF1(1)                                                                                           --------->ABI4(1)                                                                                           <---------At4g35610                                                                                          --------->RAP2.6(2)                                                                                          <---------DEAR3(1)                                                                                          --------->DEAR3(1)                                                                                          --------->RRTF1(3)                                                                                          --------->RAP2.3(2)                               ----------->HVH21                                          --------->ATERF1(2)                               <---------ETT(1)                                           --------->RAP2.3(3)                              --------->MYB46(3)                                          --------->RRTF1(2)                              --------->DEAR3(2)                                          <---------ATERF1(2)                           ------->GAMYB                                                 --------->RAP2.3(1)                          --------->MYB46(3)                                             --------->ORA47(2)                          --------->DEAR3(1)                                             --------->RRTF1(1)                          <---------MYB55(2)                                             --------->ERF1                          <---------MYB52(2)         <---------ALFIN1                    --------->ATERF1(1)                    ------->PIF5                     ----------->RAV1(1)                 --------->RAP2.6(1)                    <-------MYC2                  <---------PCF5                        <---------At4g35610                    <-------PIF5                  --------->PCF2                        <---------ATERF1(1)                    <-------PIF4                  ------>NtERF2                         ------>NtERF2                    ------->PIF4                 <-----------TCP11(1)                   --------->LBD16                    <-------MYC3               <---------LBD16                          --------->At4g35610                    ------->MYC2             --------->ARR14(2)                         <---------RAP2.3(1)                    ------->MYC3             <---------ARR14(2)                     --------->ARR14(2)                 <---------ANAC58          --------->ANAC46                 <----------DOF2------>NtERF2                 <---------ANAC58          ----------->HVH21               <---------DAG2--------->DEAR4(2)     <---------YAB1 ------->MYC4<---------ALFIN1 --------->LBD16        <-----------GT1--------->ANAC46   *TSS          <---------AtLEC2        --------->ANAC46              <-----------GT1<---------LBD16 ---------GT1    <---------ANAC46     --------->ARR14(2)      <-----------GT1       <---------ARR14(2)   aaaccttctcattacacttgcatgtgcaacgacccgaccctatacccgacccggcccacattttaaacccattttagccttttctgtttccgccgccgac  1306600                                                                              --------->ANAC58                                                                              --------->ANAC46                                                                            <---------ALFIN1                                                                           <---------ZAT2                                                                           <---------At4g35610                                                                           --------->ZAT2                                                                           --------->At4g35610                                                                          --------->ANAC58                                                                     --------->At4g35610                                                                     <------NtERF2                                                                     <---------At4g35610                                                                     --------->ATERF1(1)                                                                    <---------ATERF1(1)                                                                   <---------DEAR3(1)                                                                  --------->ATERF1(1)                                                                  <---------At4g35610                                                                  <------NtERF2      --------->KAN4(1)                                         <---------RAP2.3(2)      <---------KAN4(1)                                    --------->ATHB12<------NtERF2      --------->ICU4                     --------->LBD16  <---------YAB1  --------->ANAC58     <---------KAN4(2)                 <---------LBD16 ----------->HVH21  ------>NtERF2 ------>ZmHOX2a(2)              <-----------ARR10      ----------->TGA1------>NtERF2 ->DEAR3(1)                     --------->ARR14(2)   --------->At4g35610 --------->ATERF1(2) ->DREB2C(2)                    <---------ARR14(2)   <---------At4g35610 <---------ATERF1(2) ->RAP2.3(3)                 ------->GAMYB <---------ARR14(2)   <---------RAP2.6(2)              ---- --->HVH21                 --------->At4g35610      --------->DEAR3(1)--------->DEAR3(1)     <------ZmHOX2a(2) >ATERF1(1)              --------->MYB46(3)--------->ARR14(2)  --------->RAP2.6(3)----------->HVH21 >RAP2.3(1)    ---------->DOF2  ------->TEIL      ------>NtERF2<---------LBD16--------->ANAC58  <<<<< >ORA47(2)   <------ZmHOX2a(2) <---------GLK1(2) --------->ANAC46<---------RAP2.3(1)     <------ZmHOX2a(2)   tgatcggaataatcgatcaaagagagaacaactgaatcttcgccggatactacgccgatgacgattgcggcagcgccagcacgccagacagatcgatcag  1306700                             <------NtERF2                           <---------DEAR3(1)                          --------->RAP2.6(3)                        ----------->HVH21                        <---------O2                        --------->TGA1a                        --------->O2                     --------->TGA2(2)                    <-----------HVH21                    <-----------TGA1                   --------->O2                   --------->TGA2(1)                   <---------TGA1a                   --------->TGA1a                   <---------O2  <---------DEAR3(1)                   <---------TGA2(1)                   <---------bZIP60(1)                                                             <-                   --------->ANAC46                                      <---------MYB46(3)        <-                   --------->ANAC55(2)                             ------>NtERF2              -------                   <---------ANAC55(2)                            ----------->HVH21         ---------                   <---------ANAC58              --------->LBD16  --------->DEAR3(1)     <------MYB83                   --------->ANAC58            <---------LBD16  <---------ATERF1(1)      <------MYB46(1)                   --------->bZIP60(1)<------NtERF2             ------>NtERF2            <---------ANAC55(2)                   --------->ANAC58  <---------DEAR4(2)         --------->LBD16          ----------->GT1                   <---------ANAC58 <---------DREB2C(2)        <---------DEAR3(1)       --------->MYB46(2)              --------->ZAT2------>NtERF2  <---------ANAC58   <---------LBD16           --------->MYB59        <-----------GT1 <---------TGA1a--------->ALFIN1  <---------ARR11(3)         <------ZmHOX2a(1)      ----------------------->TaNAC69(2)   <---------ANAC58  ------>ZmHOX2a(1)      ================= ----->MYB46(3)   --------->SPL7--------->ATERF1(1)      <---------ARR14(2)     --------->LBD16    <- <<<<<<<<<<<<LFY <---------TGA2(2)  <---------DEAR3(1)   --------->ARR14(2)   <---------HSFB2a(2) <--   ccactggtttcaaccctgcttacgtcacgacggcgaaggcggtgagcgttccggttcaagttcctccggcgactgtggtttccgaaggattaggtaaaga  1306800                                 ------>NtERF2      ------>ZmHOX2a(2)          --------->LBD16      =====================HOX2a_HOX2a --------->ANAC58    --------->ARR11(3)         <---------LBD16    <---------ARR11(3)         --------->At4g35610                          --------->At4g35610  --------->WRKY12             <---------At4g35610                          <---------At4g35610 --------ANAC58                ------>NtERF2                              <---------GLK1(1) --------ANAC58             --------->At4g35610                         ============================= -->ICU4                --------->ARR14(2)                              <------ZmHOX2a(1)         --- ->DOF2             <------ZmHOX2a(1)  --------->ANAC46       --------->ANAC58                  ----- ============HOX2a_HOX2a<---------ARR14(2)          ------>NtERF2     <---------TOE1(3)         <---- --------ANAC46  <---------At4g35610   --------->ANAC58       --------->ANAC58            --------->ARR14(2) -----TEIL     <-----------RAV1(2)<------NtERF2    --------->ANAC46   <---------TOE2(3)   <---------ARR14(2)   tgcgttgatctcatggttcagaggagaattcgctgcggcaaacgcgataatcgacgcgatgtgctcgcatctaaggatagctgaagaagcggtatctgga  1306900                        <---------ARR14(2)                        --------->ARR14(2)                     <------NtERF2         --------->ZAT2--------->GLK1(1)          ------>ZmHOX2a(2)         --------->At4g35610       <------NtERF2 <------ZmHOX2a(2)         <---------At4g35610  --------->DEAR3(1) <---------GLK1(1)        --------->GLK1(2)<------ZmHOX2a(2)      --------->ARR14(2)        ------->TEIL ------>NtERF2<-----------HVH21  <---------SPL7    --------->LBD16--------->ATERF1(1) ====HOX2a_HOX2a   <---------DEAR3(1) --------->At4g35610        <-------TEIL --->ZmHOX2a(2)   <---------LBD16 <---------ATERF1(1)         --------->At4g35610 ---->ARR14(2)--------->ARR14(2)  ------>NtERF2 <---------ARR14(2)        <---------YAB1 -----ARR14(2)<---------ARR14(2) --------->DEAR3(1)           <---------At4g35610                <---   tcggagtacgaagctgtattcgcggcgatccatcgccgtcgtctgaattggatccctgttcttcagatgcagaagtatcattccatcgctgaagtagcga  1307000  Previous    Next  AGI:  At4g02940.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT2G48080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22468.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 1306503    to: 1310946    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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