Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                                        --------->ARR14(2)                                                                        <-----------ARR10                                                    =============================HOX2a_HOX2a                                                    <------ZmHOX2a(1)   <---------ARR11(3)                                                --------->LBD16         <---------AGP1         ------>ZmHOX2a(1)                     <---------HSFB2a(2)   --------->LBD16 ------->SPL7                                 ==============================HOX2a_HOX2a ------->SPL1(2)                              <---------LBD16        ------>ZmHOX2a(1) ----->TEIL                                   =============HOX2a_HOX2a <---------CCA1(2) ------TEIL                                   ========================HOX2a_HOX2a ------>MYB52(1)                              ------>ZmHOX2a(2)     <---------LBD16 <---------TOE1(3) ------SPL7                                 <---------ARR14(2)     ----------->RAV1(2)     --------->ETT(2) -----MYB52(2)         ------>NtERF2        --------->ARR14(2) ==================HOX2a_HOX2a ----------AtSPL3      --------->LBD16  --------->At4g35610    ------>ZmHOX2a(1)    <---------TOE2(3) ------------SPL14    <---------LBD16   ----------->RAV1(2)   <---------ANAC58     <---------DOF5.7(2) -->MYB52(1)         <---------LBD16    <---------ZAT2        --------->TOE2(3) <----------DOF2   <-- >MYB46(3)   <---------At4g35610        <---------At4g35610   <---------ANAC58---------->ID1     <---   gtacggccatcctctagctgttttccggcgaaaataagcctctgctgatccggaggaatgccttccttatcctggatcttggccttaacgttgtcgatgg  1279600                                                            <---------At4g35610                                                            --------->At4g35610                                                           ------->TEIL                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                      --------->CCA1(2)                                                     --------->AGP1                                                     <---------AGP1                                                     --------->ARR14(2)                                                     <---------ARR14(3)                                                     <---------ARR14(2)                                                     --------->ARR14(3)          <---------ALFIN1        --------->LBD16    --------->ARR11(3)                    <---------ANAC46      <----------DOF2           <---------LBD16    ----------->ARR10                       <---------ANAC58 ---------HVH21              <----------DOF2     ---------->DOF2                           <---------ANAC58 ------bZIP60(1)    <xxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------ARR11(3)          <---------TOE2(3) --   tgtcagagctttccacctcgagggtgatagtctttccggtgagagtcttaacaaagatctgcatctgtaattcacaaaaaactgagattaatcgcttgga  1279700                                        <---------AHL20(2)                                        --------->AHL20(2)                               --------->AGP1                               <---------ARR11(3)                               <---------AGP1                               <---------ARR14(2)                               --------->ARR11(3)                              <---------CCA1(2)                                                     -                       -------->P------>ZmHOX2a(2)      <------ZmHOX2a(2)                           -             --------->AHL20(2)--------->ARR14(2) --------->ARR14(2)                             ----      <---------ARR14(2) --------->AtMYB61     <---------ANAC55(2)                       --------->GLK1(2)      --------->ARR14(2)--------->MYB46(3)     --------->ANAC55(2)         ------>NtERF2 --------->ARR14(2) --------->TOE2(3)--------->DAG2<------ZmHOX2a(2) <---------ARR14(2)      --------->DEAR3(1)--------- ------->GLK1(2) ---------->DOF2--------->CCA1(2) --------->MYB52(1) --------->GLK1(2)   <---------ARR14(2)   taatctcaaatccgattaaaaaagctaccaccagatctgaatataaatcacatatcggatcaaattcaaagaatcgacgcctaaatatacaaatctgtga  1279800                                          ------->TEIL      ------->TEIL              ------>ZmHOX2a(2)   --------->ANAC46            --------->CCA1(2)               <------ZmHOX2a(2) -------->TOE1(2)              <------ZmHOX2a(2)  <---------CCA1(1) -------->TOE2(2)             <---------ARR11(3)  <---------RVE1(1)        ------->GAMYB           -- ----->GLK1(1)                --------->AGP1     <---------ARR11(3)     --------->MYB52(1)         -- -->GT1                       --------->ARR11(3) --------->ARR11(3)     <-----------GT1---------->DOF2   aatctacgaaccctagttcagaatatagatgagatctagcgatgaaactcagatatttatctccgatcaaagattaaccgaatcaaactcaaagaacagg  1279900                                                                  <---------YAB1          <------ZmHOX2a(2)                                       --------->LBD16       <---------ANAC58                                   --------->TOE2(3)       <---------ANAC58                                 <---------At5g28300 ------->ANAC58       <---------AHL20(2)        --------->LBD16 ------>ZmHOX2a(2)---------->DOF2 ------->ANAC58 ----------->GT1         --------->YAB1 <-----------GT1       --------->CCA1(2)   gacgaaattgcgatcgaatggaaaataatcgaagaaactgaataagaacccagaaatttaccttgatcccgattgagagatttgaaagaacgatttcaga  1280000                                                     <---------AHL20(2)                                                    <-----------TBP                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                 --------->AHL20(2)                                                 <---------AHL20(2)                                                <---------YAB1                             <---------O2                                          <---------TOE2(3)            <----------ID1      --------->O2              --------->At4g35610         <---------TOE1(3)          ---------->DOF2   <-----------HVH21             --------->GLK1(2)            <---------TOE1(2)    ----------->GT1        <------MYB46(1)            <---------GLK1(2)        --------->ARR11(3) <---------HSFB2a(2)           <------MYB83       >>>>>>>>>SARD1        >>>>>>>>>TBF1<---------TOE2(2)   >>>>>>>>>TBF1           <---------DEAR3(2)       >>>>>>>>>CBP60g      *TSS     <---------ARR11(3) --------->HSFB2a(2)   <------ZmHOX2a(1)------   gtttgagaaatttggaatctgaatttgtgaagaagaataggtcttaggttattaatttatagaagaagaaaaaaagacgaggacgagtcggtcacgagaa  1280100                                    --------->ANAC58                                    =================bZIP_DOF                                    --------->ANAC46                                    <---------ANAC55(2)                                    --------->ANAC55(1)                                    --------->ANAC55(2)                                    --------->ANAC58                         =====================bZIP_DOF                         ---------->DOF2                       --------->MYB46(3)                      -------->P    <---------O2                      ------>MYB46(1)                      ------>MYB83  --------->O2                      ========================MYC_MYB                    ------->GAMYB   <---------TGA1a                                                 <            ------------>CBF        ----------->GT1                                               ---           --------->ANAC58         --------->TGA1a                                          <-------         =====================================bZIP_DOF                                       <-------         ---------->DOF2------->GAMYB                                                        <-------        --------->ALFIN1======================MYC_MYB                                        <-------       --------->At5g28300          --------->bZIP60(2)                  --------------->AGL15    <--       <------NtERF2==========================MYC_MYB                    <---------DAG2    <------ZmHOX2a(2)     <---------DREB2C(2)--------->AtMYB61        --------->ANAC55(1)     --------->TOE2(3)--------->ARR14(2)     <---------DEAR3(1)<---------MYB55(2)        --------->ANAC46        <---------------AGL15   ----  --------->DAG2   <---------MYB52(2)            --------->ANAC58       ----------------->AG <------- ---------->DOF2   --------->MYB46(3)     <----------DOF2               <-----------------AG------>ZmHOX2a(2) =============================================bZIP_DOF                  ----------------->AGL1------- ---->DOF2 --------->ANAC58    ----------->HVH21 --------->ANAC58    <---------WOX13(1)   <---------ARR14(2)   agctaaggcggtgaagcaataaccaaccaaagcttgacacgtaacttttacacgaaacgattttttggctaattgccttatttgataaacacgatccgtg  1280200        --------->At4g35610        <------NtERF2        <---------At4g35610     --------->At4g35610     <---------ZAT2     <------NtERF2     --------->ZAT2     <---------At4g35610    <---------ATERF1(1)    ------>NtERF2   <---------DEAR3(1)  <---------At4g35610  --------->LBD16  --------->ATERF1(1)  <------NtERF2  <---------LBD16 <---------ATERF1(1) --------->ANAC46 ---------LBD16                                                                                    -- ------>ZAT18                                                                                      -- --ANAC58                <---------ANAC46                                                <------ZmHOX2a(2) --ANAC55(1)          --------->ANAC46                                                 ------->GAMYB --ANAC55(2)        <-----------GT1                                                   --------->MYB46(3) --ANAC58   --------->MYB46(3)            <---------GLK1(2)   <---------YAB1        --------->MYB52(1) -------ZAT18     <---------AHL20(2)   ------->GAMYB   <---------LBD16  --------->ARR11(3)        <-- ------->HVH21   --------->YAB1        --------->TOE2(3) --------->LBD16<---------ARR11(3) <---------SPL7 --ANAC46  --------->ANAC58           --------->MYB46(3)--------->LBD16<---------At4g35610------>ZmHOX2a(2) -->LBD16  --------->ANAC58<---------MYB52(1)       <---------SPL7   <-----------RAV1(2) ------------   tgcccgcggctgcaaccaattttaacgccgtttatttctaaccacaatctctatcgtcccggttattagagccagatgttgagacttaacgatcgtacca  1280300                                                                                            <--------                                                          --------->DOF5.7(2)               ---------                                              --------->YAB1                            ---------->DOF2                          <---------LBD16    <------ZmHOX2a(2)                     <---------AHL20(2)         <-------TEIL  <-----------GT1      --------->ARR11(3)                     <---------YAB1     --------->LBD16  ----------->HVH21     <---------ARR11(3)                     --------->AHL20(2)   <---------LBD16  --------->ANAC55(2)    <------ZmHOX2a(1)          --------->ANAC58 --------->AHL20(2) ------->AHL20(2)<---------AHL20(1)    <---------MYB52(1) <---------MYB52(1)  ----------->GT1<------ZmHOX2a(2) -------->DOF2--------->AHL20(2)    ------>ZmHOX2a(2)    <-----------HVH21   <---------TOE1(3)  <---- -------ATHB12--------->YAB1        ==============HOX2a_HOX2a         --------->ANAC58 <---------AHL20(2) --->AtSPL3  <---------ATHB12   ----------->ARR10    ------------>MYB.PH3(1) <---------TOE2(3)  -----   ataaaaccgggttcaataatatatgtaacccggtttgatccgataggatcatattgaaccgttacccatggcacttaataaggttttaattaaagatcag  1280400                               <----------DOF2                              <---------ANAC58              --------->ARR11(3)    <---------MYB52(1)      <---------AHL20(2)--------->AHL20(1)     <---------AHL20(2) --------->AHL20(2)     --------->AHL20(2) <---------AHL20(1)    <---------YAB1      <---------AHL20(2) -ARR11(3)    <---------ARR11(3)    ---------->ID1                       <---------AHL20(2) >ARR11(3)  <---------TOE2(3) <---------ANAC58                           --------->AHL20(2)    <----- -----At4g35610        --------->YAB1                            <---------YAB1    --------->AHL20(2) ---->At4g35610--------->GLK1(2)   <-------GAMYB          --------->TOE2(3)      <----------DOF2-----   cagattataaatttgagattttgaaatataatgctttcgttgttttggccagaatagaagcattaatacaattgtttaattcactttaaatgtgaacatg  1280500  Previous    Next  AGI:  At4g02890.1    Description:  UBQ14 (ubiquitin 14); protein binding. similar to UBQ11 (UBIQUITIN 11), protein binding [Arabidopsis thaliana] (TAIR:AT4G05050.2); similar to UBQ11 (UBIQUITIN 11), protein binding [Arabidopsis thaliana] (TAIR:AT4G05050.1); similar to UBQ11 (UBIQUITIN 11) [Arabidopsis thaliana] (TAIR:AT4G05050.3); similar to ubiquitin [Antirrhinum majus] (GB:CAA48140.1); similar to unknown [Populus trichocarpa] (GB:ABK94002.1); similar to pentameric polyubiquitin (GB:AAA34124.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 1278577    to: 1280028    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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