Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                  <---------ARR14(2)                                                                                ------->TEIL                                                                                --------->ARR14(2)                                                                                <-----------ARR10                                                                                <---------ARR11(1)                                                                               <---------CCA1(2)                                                                               <---------ARR14(1)             ----------->HVH21                                           <---------HSFC1(2)          <---------ARR11(3)                                             <---------At4g35610          --------->ARR14(2)                                             --------->HSFB2a(1)          --------->GLK1(2)        -------->P                            --------->HSFC1(2)   ----------->GT1                <-----------GT1                        --------->At4g35610 ------->ANAC58                 <---------ANAC58                         <---------ZAT2           <-- ------->ANAC46                 <---------ANAC58                         <---------HSFB2a(1)    ----- ------->ANAC58            <----------DOF2                            <------ZmHOX2a(1)         <----   caaggaagtcaaaatctgacaagggaagacttttacttaccctgcatttctaaaccctcatagataacataaggaagcttcgaatcttcagtagaatcag  1272300                                                                                                 <---                                                                   --------->MYB46(3)           -----                                                       --------->LBD16                         <-----        <---------At4g35610                           --------->HSFB2a(2)                      <-----        --------->At4g35610                   --------->YAB1<---------ANAC46                  -------       ------->TEIL                        --------->WOX13(1)    <-----------GT1              <------ -------ZAT18                     <-----------HVH21   <---------HSFB2a(2)                     <------ ---->At4g35610                <---------ANAC58      <---------LBD16------->GAMYB             ------- -----At4g35610                <---------ANAC58     --------->MYB52(1)      <---------AtLEC2 <------ZmHOX2a(1)   cgaacaatgtagctaaatctatgccatcttgttccatgtcaacaccaattagacttccggagttgtgtaacagcctttgcatcacgagcacattaggatc  1272400         ---------->DOF2    <---------ZAT18    --------->ZAT18    <---------ZAT14                        --------->ANAC58    --------->ZAT14                        --------->ANAC58                                       --- -------DOF2                               --------->ANAC46                                 <-------- ->ZmHOX2a(2)                             ------->GAMYB                                   <---------ARR11(3) -ZmHOX2a(2)                       --------->TOE1(2)                                --------->ANAC58 ----RVE1(1)        --------->HSFB2a(2)  <---------ALFIN1      <---------YAB1       --------->ANAC58 -->ARR11(3)       --------->REM1(2)   ----------->RAV1(1)    --------->AHL20(2)    --------->ANAC46 ---ARR11(3)    <---------ANAC58  =================RAV        <---------AHL20(2)   <---------LBD16--- ---ARR14(2)    <---------ANAC46  ----------->RAV1(2)  <---------TOE2(3)          ------>ZmHOX2a(1) -->ARR14(2)    <---------ANAC58 --------->GLK1(2)   ---------->DOF2       <---------AHL20(2)     ---   tttttgtgcaccaaagttccttgtagaatcaagagaacctgcaacacccaagaagtaaaggtattaatatagttttttttattcctgcgcaatgtcttat  1272500                       --------->TOE1(2)                                     --------->YAB1                      <---------HSFC1(2)                                     <---------ICU4                      <---------HSFB2a(1)           ------->MYC2             --------->ATHB12                      --------->HSFB2a(1)         ------->TEIL              <---------YAB1                      --------->HSFC1(2)    --------->ATHB12              --------->YAB1                     ------->TEIL          <---------YAB1             <---------ARR11(3)                  --------->HSFB2a(1)      --------->ICU4             --------->ARR11(3)   <---------ANAC58 ------>ANAC46    <---------HSFB2a(1) --------->YAB1<-------MYC3     <------ZmHOX2a(1)     <---------ANAC46 -ANAC46  <---------YAB1             --------->ICU4 <-------MYC2    ----------->GT1<---------ANAC46 ------>ANAC55(2)--------------->AtSPL8  ---------->DOF2           <---------TOE1(3)       <---------ANAC58 ------>YAB1---------->DOF2          <---------YAB1 ------->MYC3   <---------TOE2(3)  <---------TOE1(2)   acataatttgtgatgaaagaacgtaccttcgaacatgtcatcataaagattgaacgtgtctgtgtatataaggatattatcattgtcgtagttacttggg  1272600                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                  <---------ANAC55(2)                                                                                  --------->ANAC58                                                                                  --------->TGA1a                                                                                  --------->ANAC55(1)                                                                                  --------->ANAC55(2)                                                                                  <---------TGA1a                                                                                 <---------TOE2(2)                                                                              ------>ZmHOX2a(2)                                                                         <---------TOE1(2)                                                                       <---------ANAC58                --------->ARR14(2)                                     <---------ANAC46                <---------ARR14(2)              <---------ANAC46       <---------ANAC58               <---------CCA1(2)           <---------ANAC58       --------->At4g35610             --------->YAB1                <---------ANAC58       <---------At4g35610       ---------            <-------TEIL            <---------At4g35610         <---------LBD16  <---------TOE1(2)<--   ttttccctgtacgattcatatcccttcaagacttcttcatctgtttcttggctcggactattcttctccgcttccttggatcgcacgtaagaagaatttg  1272700                                                             --------->ANAC58                                                             --------->ANAC58                                                             <---------YAB1                                <------NtERF2             <------ZmHOX2a(2)                              <---------DEAR3(1)       <---------MYB46(3)                             <------NtERF2            <---------TOE1(2)                            <-----------HVH21        <---------MYB52(1)                           <---------DEAR3(1)       <-------GAMYB----------->GT1                           <---------MYB46(3)      <---------ANAC58 <---------YAB1    --------->CCA1(2)               <---------ANAC46                   <----------DOF2 >GLK1(2)         --------->ARR11(3)               <---------ANAC58               <---------ZAT18  << -------YAB1      <---------ARR11(3)            <---------MYB52(1)            --------------->AtSPL8   atgattcttgagtcgatggagatatagggtcgtcggagagagtcatctctgtttcgttggatcacgatagttaaaacgacttagtactctttttcgattt  1272800                                                                              <---------bZIP60(2)                                                                              <---------bZIP60(1)                                                                              --------->TGA1a                                                                              =======================                                                                              =======================                                                                              =======================                                                                              --------->O2                    --------->TOE1(3)             <---------MYB52(1)          --------->bZIP60(1)                    --------->TOE2(3)            <-------GAMYB                <---------TGA1a        <------NtERF2                            =======================================MYC_MYB      <---------DEAR3(1)            <------------CBF                          <---------O2         <-    <-----------HVH21  ---------->DOF2          <---------ZAT6             ----------->HVH21      <-- <<<<<<<TBF1       ----------->GT1<---------TOE2(3)                        ----------->TGA1    <-----   cttcttcgtcggagagacttatcgttaaaacgatttgagattgagagagactgttagacggattagtgagaccgcgagtgacgagactcgtttctgtctt  1272900                               <---------AHL20(1)       <------------------------ANAC81    <----------DOF2            <---------AHL20(2) =====bZIP_DOF        --------->ARR11(3) ==============bZIP_DOF        --------->AHL20(2) =========bZIP_DOF    <---------ARR11(3)                                ----------->GT1 ---------DOF2     <-----------GT1         <---------YAB1     --------->YAB1     <-----------RAV1(2) ----------------------ANAC81  --------->AHL20(1)  --------->YAB1     <---------ANAC46          ----- -----DOF2        <-----------GT1<------------CBF<------------CBF <xxxxxxxxxxxxxxxxsmallRNA(s)  <----   tcttttctttttttttttttttaacatcttcattttattgatattatgaagaattgtaatcaaatcgtaatgctgtgtaaattacaggtggtatagtaga  1273000                                                <xxxxxxxxxxxxxxxxsmallRNA(s)                                               ------>ZmHOX2a(2)                                              --------->CCA1(2)                                              <------ZmHOX2a(2)                                             <---------ARR11(3)                                             <---------AGP1                                             <---------ARR14(3)                                             --------->ARR14(2)                                             --------->AGP1                                             <-----------ARR10                                             --------->ARR14(3)                                             --------->ARR11(3)                                             <---------ARR14(2)                                             xxxxxxxxxxxxxxxx>smallRNA(s)                                            xxxxxxxxxxxxxxxx>smallRNA(s)                                         <---------At4g35610                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                  xxxxxxxxxxxxxxxx>smallRNA(s)                                 <----------DOF2xxxxxxxxxxxxxxxx>smallRNA(s)                                <xxxxxxxxxxxxxxxxsmallRNA(s)                               <---------At4g35610                               --------->At4g35610                              xxxxxxxxxxxxxxxx>smallRNA(s)                             <---------ZAT18<---------CCA1(2)                             xxxxxxxxxxxxxxxx>smallRNA(s)                             --------->ZAT18<xxxxxxxxxxxxxxxxsmallRNA(s)                   --------->ANAC46xxxxxxxxxxxxxxxx>smallRNA(s)  xxxxxxxxxxxxxxxx>smallRNA(s)                  --------->HSFB2a(2)   xxxxxxxxxxxxxxxx>smallRNA(s)   ----------->HVH21                  <---------HSFB2a(2)  xxxxxxxxxxxxxxxx>smallRNA(s) xxxxxxxxxxxxxxxx>smallRNA(s)     <---------AHL20(2)     xxxxxxxxxxxxxxxx>smallRNA(s)         <---------At4g35610    --------->AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(s)      --------->MYB52(2)              --------->ZAT6 ------>GT1       --------->HSFC1(1)  xxxxxxxxxxxxxxxx>smallRNA(s)  --------->LBD16   <-----------GT1 -----ZAT6        <---------HSFC1(1)<xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxx>smallRNA(s) <-------   gtaaaatttaaaatgttcttctcgaaacaagtgagctttggctagcagatctgcaggtttgtttgtcatccgagtgacccatgtgaatttacactctcga  1273100                                                              <------------CBF                                                             --------->ATHB12                                                             <---------ICU4                                                             -------->ATHB1                                                            <---------YAB1                                                         ------------>ATHB5                                    <-----------GT1   <----------DOF2          <---------ZAT2                                  --------->AHL20(2) <---------ANAC58          --------->ZAT2                                  --------->YAB1<---------ANAC58               <---------At4g35610                                 <---------ATHB12    <---------ANAC58       --------->At4g35610      <-----------GT1            <---------ATHB51    <---------DAG2  <---------KAN4(2)       xxxxxxxx   <---------GLK1(1)         ------------>CBF   <---------ANAC58 --------->YAB1--------->At4g35610 --HSFB2a(2)           --------->HSFB2a(2)<------ZmHOX2a(2) <---------ATHB12<---------At4g35610------   aatcgatttctccatgcctgaacttctctaacccaattatacagatcaaatcgtgcctttccatcattgagaattttcagcagctccatgttatctcctt  1273200  Previous    Next  AGI:  At4g02870.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G78640.1) Range:  from: 1271654    to: 1272746    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g02871.1    Description:  unknown protein Range:  from: 1272781    to: 1272933    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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