Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 ------>ZmHOX2a(2)                                                              <---------GLK1(1)                                                              <---------At4g35610      ------->TEIL                                           <---------ARR14(2)      --------->ARR14(2)                                     <---------ARR11(3)      <---------ARR14(2)                                     <---------AGP1      --------->GLK1(2)                                      --------->ARR14(2) --------->MYB52(1)                                       --------->HSFB2a(2) ->ARR14(2)                                             <---------At4g35610 ->ARR11(3)   <-------GAMYB                             =======================RAV --ARR11(3)  --------->MYB52(2)                         ----------->RAV1(2) --ARR14(2)  <-----------RAV1(1)                        --------->At4g35610 <-----------GT1 -GLK1(1)    <---------MYB46(3)      --------->ICU4    ------->TEIL----------->RAV1(1)           ---- -CCA1(2)  <---------MYB52(1)<----------DOF2 <------ZmHOX2a(2)--------->At4g35610  <-----------HVH21   cacaaacgaatctgtttgttgcaagaagtgtctttggtgataatgcgatcacttctgcatctggatctgccacataataaaccagtttcacatgaaaaat  1178100                                             --------->TOE1(3)                                    <--                               --------->ARR11(3)         ---------->DOF2                         <--                               <---------ARR11(3)     --------->AHL20(2)                    ---------                        ---------->DOF2      --------->TOE2(3)      <----------DOF2        ---------- ------>DOF2       ----------->GT1    --------->ANAC46<---------AHL20(2)      <---------ALFIN1    ---   aaagtctcaaacacatagtcttggtaaaaagatgatattcacacaaaccctaatattaaaaaaaggaagacttttttgcaaaaccccataagaaaaagtt  1178200                                                                                              <------                                                                                              <------                                                                                            <--------         --------->GLK1(2)               --------->ATHB12                                   <-------- -------TOE2(3)   <------ZmHOX2a(1) ------>ZmHOX2a(1)                             --------->DAG2 -------TOE1(3) --------->ANAC46    <---------YAB1                                --------------->AtSPL8 >DAG2  <---------GLK1(2)       --------->ARR14(2)              ------------------------>ANAC81    <- >DOF2  <---------ARR11(3)      <---------ARR14(2) <-----------GT1                <---------------AtSPL8 ------>MYB59-------->P---------->DOF2  <-------TEIL      --------->GLK1(2)      ---------->DOF2 ----   taggttccaagattctaccaggaatcaaagacagtatcctgattcatttgttttttcaagattccaaatgaaaaaaaaaaaaaaaaagtactattttctt  1178300         --------->LBD16        <---------HSFB2a(2)    --------->GLK1(1)    <---------GLK1(1)   --------->ARR14(2)   <---------ARR14(2)  <------ZmHOX2a(1) ---ANAC58                                                        <---------GLK1(1)      --------->GLK1(1) ---ANAC58                                                 --------->ZAT6       --------->ANAC58 ---GT1 --------->HSFB2a(2)                         <---------ZAT14             --------->ANAC58 -AHL20(2) <------ZmHOX2a(1)     <---------ANAC58   --------->ZAT18             --------->ANAC46 --------LBD16        <----------DOF2             --------------->AtSPL8      ---------->DOF2      <- ---->P <---------LBD16          <---------ANAC58 <---------------AtSPL8    <---------YAB1         <-   accaggatttccaggaaggcctctctttttcttaggcttgtgagtctctgtgtgtgtacaaacactagaaatcacattgtgaaagccactgaattcttgg  1178400                   ==================================================================================                   --------->HSFB2a(2)                   <---------HSFB2a(2) <---------At4g35610                   <---------------AGL15                   --------------->AGL15                  ----------------->AGL1                                                           <-                  <-----------------AGL1         <---------ARR11(3)      --------->YAB1          <---                  ----------------->AGL2 <---------ETT(2)          --------->ANAC58           <------          --------->ALFIN1        <---------ANAC58             <------ZmHOX2a(1)              <------      <---------ANAC46            <---------ANAC58     <---------At4g35610            <---------ARR14(2) -----MYB46(1)  <-----------GT1------->PIF5      --------->ARR11(3)--------->ANAC58   --------->ARR14(2) -----MYB83<-------GAMYB       <-------PIF5  ---------->DOF2  <----------ID1         --------->GLK1(1)   atggtactgagtgtgttgttaccagaagaggcacttgcttcagtagacaaagagcttagcttataggacaaggaatgagaagaaaacatatccatggcta  1178500                                                                                 --------->CCA1(2)                                                                                 <------ZmHOX2a(2)                                                                                --------->AGP1      <---------YAB1                                                            --------->ARR14(2)    ----------->GT1                                                             <---------ARR11(3) ============================MADS_MADS ----------->GT1                          --------->ARR11(3) ---------DOF2                   ----------->RAV1(1)                            <---------ARR14(2) ------STY1(2)                ------------------------>ANAC81               ---------->DOF2 ---ANAC58   <---------------AGL15   ---------->DOF2                      --------->YAB1 ---ANAC58   --------------->AGL15 --------->MYB46(3)                    ----------->TBP          <--   gctatatggttatagctatatgaagaaggaaactccaacaaaagaaaaaacaaaaacaaaacttggaagaaaactataaaaagatccaaactttggtttc  1178600                                                          ---------->DOF2                                                       --------->ANAC46                                                    <---------REM1(2)                           <----                  <---------ARR14(2)                --------->ZAT18                             -----                  --------->ARR14(2)                --------->ZAT14                             -----               <---------TOE2(3)                  <---------ZAT18                              <-----         --------->AHL20(2) ------->TEIL          --------->ZAT18                           <--------    ------>ZmHOX2a(2)    --------->ANAC58         --------->ZAT14                          --------->AHL20(2)    ====================HOX2a_HOX2a               <---------ZAT14               --------->ARR14(2)   --------->GLK1(1)     --------->ANAC58       <---------------AtSPL8         ----------->TBP ------ -------At4g35610<------ZmHOX2a(1)  ----------->GT1 <---------ZAT14    <----------DOF2     <---------AHL20(2)   ttctgatctcttaaaataaggaactgcaagtacctagagagtaagaagtaagtgtacacagaaagacatcattctttggctatatatgcaaaattaaata  1178700      <---------ANAC55(2)      <---------ANAC58       <-------MYC2      --------->ANAC55(2)    ------->MYC2      <---------ANAC58       <-------MYC4                                      >>>>>>>>>>>>>>>>>LFY      <---------ANAC46       <-------MYC3                                  --------->KAN4(2) -----AHL20(2)             ------->TEIL                                   <---------KAN4(1) ---->AHL20(2)           <---------ZAT18                                  --------->KAN4(1) ---->AHL20(1)       <---------AHL20(2)                              <---------WOX13(1)       ------- ----AHL20(2)  <---------ANAC46                   --------->ANAC58 --------->ATHB12           <------ -AHL20(2)     <---------ZAT6------->MYC3         --------->ANAC58--------->ICU4             -------- --->AHL20(2)  ----------->GT1   ------->TEIL   ---------->DOF2   <---------YAB1------------>CBF   atttagttacttgagtagtgtatataatgcacatgtatatgtatagtctcaaaagcaagaagacgaccatgatggattattctccaatgtcactatcatg  1178800               <---------ANAC58               <---------ANAC58              <---------At4g35610              --------->At4g35610            <---------ZAT18                        <---------AHL20(2)                              <- -------->AtSPL8                                   <---------YAB1                        ---------->DOF2 ---------AtSPL8       <---------ICU4             --------->AHL20(2)             ----------->RAV1(1) ->YAB1     --------->ZAT18                   --------------->AGL15    ----------->GT1  <------ZmHOX2a(1)   tacacatatatgtgtgtgcttacaataaatgcaaagactgtttgattcccatttttattagtttttctatgtgcagataaataccacagaggaaagagat  1178900                                                 <---------AHL20(2)                                          <------------MYB.PH3(1)                                  <-                                        <-----------GT1                                   <---------AHL20(2)     ---------->DOF2                 --------->TOE2(3)                                   --------->ICU4  <----------DOF2                 <---------ARR11(3)           ------>ZmHOX2a(1)      <---------AHL20(2) <---------ANAC58                 --------->ARR11(3)          --------->TOE2(3)     --------->ANAC55(2) <---------ANAC58    <----------DOF2 <----------DOF2    <---------AHL20(2)       <---------AHL20(2)-- --------YAB1  <----------DOF2   <---------CCA1(2)<---------AHL20(2)       <----------DOF2--------->AHL20(2)   tgtgcttgaaagtgagactttgactttgttttcatatatctttaactgttttttattttttattcctcagttttattctttattttatgtaattttttaa  1179000  Previous    Next  AGI:  At4g02670.1    Description:  ATIDD12 (ARABIDOPSIS THALIANA INDETERMINATE(ID)-DOMAIN 12); nucleic acid binding / transcription factor/ zinc ion binding. similar to MGP (MAGPIE), nucleic acid binding / protein binding / transcription factor/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G03840.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22597.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087) Range:  from: 1176190    to: 1178489    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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