Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                 <---------ARR14(2)                                                               --------->GLK1(2)                                                           ------>ZmHOX2a(2)                                                         --------->ARR14(2)                                                         <---------ARR14(2)                                                 ----------->HVH21                                                 --------->ANAC58                                                 --------->ANAC46                                         <-----------HVH21<------ZmHOX2a(2)                        <-                                  ===============================HOX2a_HOX2a              <----------DOF2                                  ------>ZmHOX2a(1)    --------->LBD16                 <---------ARR11(1)            <-------TEIL          ================================HOX2a_HOX2a         <---------CCA1(2)          <---------ARR14(2)    ----------->RAV1(2)  <---------LBD16                  <---------MYB52(1)          --------->ARR14(2)<---------ALFIN1----------->HVH21  --------->ARR14(2)-------->P        <-          <---------GLK1(2)--------->MYB46(3)    --------->ANAC58           --------->GLK1(1)<-------   gtttcgattccagattcattcatccgataaccactcctgaatcggtcggacacgacccggatccgaatcggggctcagaaatcaacccgtttcttttgat  1173900               <---------ICU4               --------->YAB1--------->ANAC58                                   <------MYB46(1)               ---------->DOF2                                                 <---------MYB46(3)     --------->ANAC58        -------->P                                        --------->MYB59     --------->ANAC58        --------->ANAC58                                  --------->MYB111(1)   --------->MYB52(1)       ------->GAMYB                                      --------->MYB46(2)  <---------ARR14(2)       <---------MYB55(2)                                  <---------AtMYB61 <------ZmHOX2a(1)         <---------MYB111(2)                                 --------->MYB111(2) --------TOE1(3)           --------->MYB46(3)                             <---------TOE2(3) --------TOE2(3) <----------ID1                           --------->ZAT18 <---------TOE1(3)    ------ --YAB1       <---------ATHB12 ------->GAMYB      ------->TEIL  --------->ALFIN1<------MYB83   <-----   taaggaaacggaatcaataaagacgaacaacaacccagacatcaaaactatgtatgctggtgcaatgtgtgagattagggtttggtagcaagaacaaaat  1174000                                     ------>MYB46(1)                                     ------>MYB83                                    ----------->RAV1(1)        <---------ICU4             --------->AtMYB61   <------ZmHOX2a(2)              --------->MYB46(3)   --------->CCA1(2)            --------->AtMYB61  --------->AGP1               --------->MYB46(3)  <---------ARR14(2)         --------->ANAC58                                                     ---  <---------ARR11(3)         --------->ANAC46                                                   <----  --------->ARR14(2)         --------->ANAC58                    --------->YAB1             ---------  --------->ARR11(3)      <-------TEIL--------->MYB46(3)------>ZmHOX2a(1)                   <-------- --->GLK1(2)            --------->ARR14(2)          <-----------GT1  --------->GLK1(2)      <-------- ----ARR11(3)<---------YAB1<-----------GT1    <-------TEIL  ------>ZmHOX2a(1)               ---------   ctaagatccaaaattgcgattagcgagattcacaccaccaacaacaagttcatttctccttcctccttgataatctgagaagaatactgaaacagatttt  1174100       --------->ANAC58       --------->ANAC58                                              <---------TOE2(3) ------->DOF2                                                       <-----------GT1--------->AHL20(2) -----YAB1                                                          --------->MYB52(1) >ARR11(3)                                              --------->ATHB12       <---------AHL20(2) -GLK1(2)                              <---------At4g35610     ------>ZmHOX2a(2)   <---------AHL20(2) -ARR14(2)                             --------->At4g35610<---------WOX13(1)   --------->AHL20(2) >ARR14(2)                    <------ZmHOX2a(2)        <---------AHL20(2)   --------->AHL20(2)   gaaaggagaacgcagaaaatcgagatttagagatcgatttacgctgaagaaaactatttcattgatcgattaacgaaataaaaaaataaatatcaatttc  1174200               <---------ANAC46                        <---------ANAC46             --------->ZAT14     <---------ICU4       <------NtERF2             <---------At4g35610<---------YAB1       ------>NtERF2             <---------ZAT14  <---------ICU4        --------->ANAC46        ----------------------->TaNAC69(2)         ------>NtERF2                             <-------    <------MYB46(1)           --------->YAB1       --------->LBD16                    ---------------    <------MYB83             <---------YAB1      <---------LBD16                ---------->DOF2   <---------AtMYB61       <---------ICU4 <---------ANAC58                     <---------WRKY45 <---------MYB52(1)        --------->YAB1 <---------ANAC58               --------->YAB1      <-------   gtcgtttggtttttgtgctgtgttcttcatcatcatcatcgtcttcgtgtctccgcgccttgtttctcgcttcaaacatagtcaaagtcgtctcactttc  1174300                                                                   <---------AHL20(2)                                <---------------AGL15           --------->YAB1                   ----                       --------->AHL20(2)                      --------->ICU4           <---------ICU4                   ------>ZmHOX2a(1)                          --------->AHL20(1)        --------->ATHB51                  --------->TOE2(3)      <---------GLK1(2)    <---------AHL20(2)        --------->ATHB12               <-----------GT1  --------------->AGL15         <---------AHL20(1)       --------->ICU4        --------->ANAC55(2)    ----------------->AGL2         --------->AHL20(2)       <---------YAB1        --------->ANAC58       ----------------->AG          --------->YAB1          --------->YAB1        --------->ANAC46--------->AHL20(2)                   <---------ICU4         <---------YAB1 --DAG2 --------->ANAC58<---------AHL20(2)  <---------ANAC55(2)<---------YAB1<------------CBF  ------ -------->TaNAC69(2) *TSS      ----------------->AGL3       <---------YAB1 ------>ZmHOX2a(1)   <----- ---DOF2<---------ANAC55(2)    <-----------------AGL3       --------->ICU4<---------MYB59<-----------   tccctcactcacgcgattttccttatttaatttccctaaaatagatacttaaaacaaaactaattataattaagttcctaattgttttcattattgcccc  1174400                                                                            <-----------GT1                                                                        <---------AHL20(2)                                                                        <---------AHL20(1)                                                                        --------->AHL20(2)                                                                        --------->AHL20(1)                                                                       --------->AHL20(2)                                                                       --------->YAB1                                                                      <---------YAB1                                                                    <--------HAHB4                                                                    -------->HAHB4                                                                    --------->ATHB51                                                                    --------->YAB1                                                                    -------->ATHB1                                                                    <---------AHL20(2)                                                                    <---------ICU4                                     --------->AHL20(2)            --------->ICU4                          --------->ANAC55(1)                      <---------ATHB51                          --------->ANAC46                    --------->ANAC46                          --------->ANAC58                    --------->ANAC55(1)                          --------->ANAC58  --------->ATHB12  --------->ANAC58                         <---------LBD16   <---------YAB1     --------->ANAC55(2)                  <- ----->LBD16           --------->MYB46(3)--------->YAB1       --------->ANAC58                     <- ----->RAV1(2)    --------->YAB1    <---------AHL20(2)    --------->HSFB2a(2)              <---------TOE2(3) ----LBD16       <---------YAB1   <----------DOF2    <-------TEIL  <---------YAB1  <-----------GT1 <- -CBF<-----------GT1 <-----------GT1--------->AHL20(2)    <---------HSFB2a(2) <---------YAB1     <---   tgaaatatttctatttcatattataaccacggaagtctttaaattatcattggggtccatctagacgtaattattatattactattaactattaagaaat  1174500                                                                                               ------                                                                                               <-----                                                                                              <------                                                                                              -------                                                                                              -------                                                                                              <------                                                                                              -------                                                                                     <---------REM1(1)                                                                                    --------------->AtSPL8                                                                                    <---------------AtSPL8       <---------AHL20(2)       <---------TOE2(3)--------->ANAC58             ------->TEIL    -------      --------->AHL20(2)       ---------->DOF2   --------->ANAC58        <---------ICU4       <------ --------ANAC58           <---------WOX13(1)  <------ZmHOX2a(1)          --------->YAB1      <------- --------ANAC46         --------->ATHB12    <---------TOE2(3)           <---------ATHB12     -------- --------ANAC58      <---------ANAC58 <---------AHL20(2)                --------->ICU4       <------- ------AHL20(2)      <---------ANAC58--------->AHL20(2)              <---------AHL20(2)    --------->WOX13(1)   tacttgcataaaatttcgaaatagcttgattgttaaagataaaatttaggaacccaaatagttgttattttttaatcatggatgttgttgtaccaattat  1174600       <---------ANAC58 --->AHL20(1) ----AHL20(2) --HAHB4 -->AHL20(2)         <---------ZAT6 -->YAB1           <---------ANAC58 ---AHL20(2)       <---------ANAC46 ->ATHB1           <---------ANAC58                                                               --- -->ATHB51      <----------DOF2                                                                   <-- ---ICU4       <---------ANAC58                                                                   <-- --ATHB12      <---------ANAC58  ------>MYB83                                                   <---- ->ICU4<---------ANAC58     <-----------GT1    <---------TOE2(3)    ------->TEIL             <------- --ATHB51 <---------WRKY18(1)    ------>MYB46(1)                   <---------CCA1(2)   <---------GLK1(2)   tttgaaatagcttgactgcttgagtgttatataccaactatttttctctaatgtagaatgttttagaatgtatctagtagtttgtaatagaatttgtgtt  1174700                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                   --------->AHL20(2)                                                                                --------->AHL20(2)      --------->ARR11(3)                                                        <---------AHL20(2)      <---------ARR11(3)                                                  <---------RVE1(1)     --------->YAB1                                                       <---------CCA1(1)   <------ -------->GT1                                                            --------->ARR11(3)   ------- -------ANAC46                                  <----------DOF2          <---------ARR11(3) <-------- -------ZAT6                              --------->YAB1             --------->CCA1(2)   --------->YAB1 -----ANAC46                              <---------ICU4        ---------->DOF2--------->AHL20(2) ----RAV1(1)         --------->ARR14(2)  <---------YAB1   --------->MYB52(1)  <---------AHL20(2)   gtgttaattatcttctggtttcaaatctacatgagaatagtttatgatgactttagaaaaaaacagaaaagagatgatattttaaattaattcatcatct  1174800  Previous    Next  AGI:  At4g02660.1    Description:  WD-40 repeat family protein / beige-related. similar to WD-40 repeat family protein / beige-related [Arabidopsis thaliana] (TAIR:AT1G03060.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22600.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62237.1); similar to putative beige protein [Oryza sativa (japonica cultivar-group)] (GB:AAP12994.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680); contains InterPro do Range:  from: 1159667    to: 1174321    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version