Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           ----------->GT1                                                                                        <---------TOE2(3)                                                                                      --------->MYB52(1)                                                                                     <---------ZAT14                                                                                     --------->ZAT14                                                                               --------->ANAC58                                                                               --------->ANAC58                                       --------------->AGL15                  --------->WOX13(1) <---           ---------->DOF2       <---------ICU4     <---------ICU4           ---------->DOF2    -----     <---------LBD16      <---------ANAC58      --------->AHL20(2)          --------->WRKY18(1) <---- --------->AGP1           <---------ANAC58   ----------->GT1             --------->DAG2 <---------ANAC46 ------>ANAC46         <---------TOE2(3)  ---------->DOF2               ---------->DOF2<---------LBD16   acagaactacggacaaagctattctaaggcttgaatcactaccaaaaagattaaaaattccacaaacaaatccaaaaagtcaagcagtttacggataaat  1150900             --------->ANAC58                                      <------ZmHOX2a(2)             --------->ANAC58                                      --------->CCA1(2)           --------->MYB52(1)                                     <---------ARR14(2)        --------->ANAC46        <------ZmHOX2a(2)                 <---------ARR11(3) ------AHL20(2)               --------->At4g35610                 --------->ARR11(3)        --------- ---->AHL20(2)                <---------At4g35610        <---------REM1(2)       --------->YAB1 -----AHL20(2)     --------->ATHB12            <-------TEIL       --------->ARR14(2)<---------ICU4   aaatctatacaaacaacgcattgatttagttcagatcacatctcagagattcaaaactcaacacagaagatccaaatgaaaaatcaaaattatctaaaga  1151000                      ------>ZmHOX2a(1)                                       <---------ICU4                     --------->TOE2(3)                                       <------ZmHOX2a(2)                  --------->ARR14(2)                                         <---------YAB1                  <---------ARR14(2)                                         <---------ATHB12       <             --------->TOE1(3)                                               --------->ICU4  --------             --------->TOE2(3)                                         <---------DEAR3(1)  --------->ZAT18          --------->ARR14(2)                                      --------->TOE2(3)  <----------CDC5<     --------->MYB52(1) --------->REM1(1)                      <-----------GT1--------->ATHB12<------NtERF2 ->DOF2   <---------ARR14(2)         ---------->DOF2        ------->TEIL <---------------------WRI1 <   atcaaactaatggaacctcaaatccttcatcaacatataaaaagatgagttttttggtaacgaatttacctcatcggcgatcattgcgatgagggcagag  1151100               --------->At4g35610                          --------->HSFB2a(2)               <---------At4g35610                          <---------HSFB2a(2)   <---------ZAT2                              --------->ANAC58   --------->ZAT2                              --------->ANAC46 ---------ANAC58       --------->ANAC46        --------->ANAC58                              -------- --->ARR10 ------>ZmHOX2a(2)    <---------AHL20(2)  <-----------GT1      --------->WOX13(1)  -------- ---------ANAC58       --------->ANAC58      --------->ANAC46--------->LBD16 --------->TOE1(2)  ----- ---------ANAC46       --------->ANAC58   --------->ZAT14   <---------HSFC1(1)              ---------   ttgcgagcagggatcgtagctctcccagccatatttgattcaactacacacgataaacaattccagaacaaaaatcaatccagcgaagaagacaattatc  1151200                                             ---------->DOF2                                     <-------TEIL    ----------->GT1                 --------->ARR14(1)                         <---------DAG2    <---------ANAC46               <---------GLK1(2)                           <----------DOF2   --------->MYB59                 --------->ARR11(1)                    <-----------GT1 ->ATHB51                     ------>ZmHOX2a(2)                       <---------ICU4 ->YAB1                     <---------ARR11(3)     ---------->DOF2<-----------GT1 ------------>AGL1          --------->ARR11(3)--------->DAG2  --------->ARR11(3) >ICU4                    ------>ZmHOX2a(1)--------->ARR11(3) <---------ARR11(3)    <-----------GT1 -   gaaattgggtaaaaaccctgatcaattcctgatcttagattcgaagataaagcaaaagctcatagattttactcattacctctttttctctgttcttctc  1151300                                                       --------->LBD16                                                      --------->ANAC58                                                      --------->ANAC46                                                      --------->ANAC58                                                     <-------PIF5                                                     ------->PIF5                                                     ------->MYC2                                                     <-------MYC2                                              *TSS   ------->MYC3                                            ---------->DOF2                                           ------->GAMYB                                          --------->MYB46(3)                                      <--                                         --------->ANAC58                                  ----------                                         --------->ANAC58                              <------------CBF ----->ZmHOX2a(1) <---------WOX13(1) --------->YAB1  <-------MYC3                   ------------>CBF   tccttcttcgatttgatttgatagatagatttgtgtaaatcacaaccaaagaccacgcgcaaaaaaaaaacttgttcagaacacgattcaattgacaata  1151400                                                                                                -----                                                                                                -----                                          --------->ATHB51                                      -----                                          <---------ICU4                                        <----                                          --------->YAB1                                       <-----                                          --------->ATHB12                                     ------                                          -------->HAHB4                                     <-------                            <-----------GT1<------------CBF                                  --------                    --------->YAB1        <--------ATHB1                        --------->ARR11(3)                    --------->MYB52(1)   --------->ICU4                  ----------->GT1    ---------                    <-----------GT1      <---------ATHB51             --------->DAG2       --------->AHL20(1)                 --------->YAB1          <---------YAB1      --------->DAG2     --------->AHL20(1)  <  ----------->RAV1(2)<---------TOE2(3)   <---------AHL20(2) ---------->DOF2     <---------ARR11(3)  < ---------GT1 <----------DOF2          --------->YAB1    --------->At5g28300   --------->AHL20(2) <-- -->CBF      --------->TOE2(3)      <----------DOF2    --------->ZAT6---------->DOF2      --------->YAB1   ttacccctgactatacctttaataacgatactaccctcctttaataattgctcattaacagtaaaagtggcaaaagtgtaaatatatactaaaaataatg  1151500      --------->ANAC58 ---->ATHB12 ---->YAB1 --->HAHB4             <---------ANAC58 -----ICU4             <---------ANAC58 ----YAB1             --------->At4g35610                                                           < --->ICU4             <---------At4g35610                                                           - --ICU4               --------->ZAT2                                                              <-- ->YAB1          --------->ANAC58                <----------DOF2                                 <--- >ICU4--------->ANAC58<---------ZAT2           ---------->ID1         ---------->ID1             ---- ---------ANAC58 --------->ANAC58          <---------MYB52(1)     <---------ANAC58             ------ ---------ANAC58 --------->ANAC46       <-------TEIL              <---------ANAC58          ------>ZmHOX2a(1) -------YAB1   ---------->DOF2        <---------SPL7          <----------DOF2             -----------   atgagtgcaagtcccatcaaagccagcttgcctcttcgagggtacgtttgtcttttcgacatctcttttcttgtctctacttcagaaaaacctcctgtga  1151600                                                                                      <---------ARR14(2)     <---------AHL20(2)                                                              <------NtERF2    --------->AHL20(2)                                                             <---------ANAC46   <---------YAB1                                                                  <---------ANAC58 <---------ICU4               --------->DAG2        >>>>>>>>>TBF1                  <---------ANAC58 ---------YAB1               ---------->DOF2     >>>>>>>>>TBF1                    <---------LBD16 -------->ICU4          ------------------------>ANAC81   >>>>>>>>>TBF1  --------->At4g35610 -------ICU4            --------->ANAC58     <------ZmHOX2a(1)           <---------At4g35610 ------YAB1             --------->ANAC58  --------->At4g35610            --------->ZAT2            <- ----->ICU4   <---------At4g35610         <---------At4g35610            <---------ZAT2           --- --->YAB1     --------->At4g35610       <-----------RAV1(2)            --------->ZAT14--------->ARR14(2) >RAV1(2)    *TSS     ---------->DOF2 <-----------HVH21>>>>>>>>>TBF1   <---------ZAT14<---------GLK1(2)   tgattattatatgtgaagcagaacaaaagcaaaaagagagagtcagaggaagaagaagaagaagaagagtcagtgagctgcaatggcggattctcactca  1151700                                                                         --------->ATERF1(1)                                                                         <------NtERF2                                                                  <-------GAMYB ------>ZmHOX2a(2)                                                                 <---------ANAC46                          <---------------AGL15              <-------GAMYB      --------->HSFB2a(1)                          --------------->AGL15             <---------MYB46(3) <------ZmHOX2a(2)        --------->At4g35610             --------->TOE2(3) <------NtERF2 <---------At4g35610        <---------At4g35610            <---------ANAC46 <---------DEAR3(1) --------->LBD16        --------->ZAT2   ----------------->AGL3   <---------MYB46(3)--------->ALFIN1   --------->WOX13(1)    <-----------------AGL2  <--------P<---------ANAC46------>NtERF2  --------->MYB46(3)     <-----------------AG   <---------ANAC58 <---------ANAC58 --------WRKY38(1)       <-----------------AGL3 <---------ANAC58 <---------ANAC58    <----------DOF2 ------>WRKY18(1)   <---------ALFIN1  <---------TOE2(3)<---------HSFB2a(2)--------->RAP2.6(2)       <   gtcaacaatcagctctcgagacacacttccatttttggtttacgtttatgggttgttctcggcgtttgcgttggagccgcgatcgttcttttactcgttc  1151800  Previous    Next  AGI:  At4g02620.1    Description:  (VACUOLAR ATPASE SUBUNIT F); hydrogen ion transporting ATP synthase, rotational mechanism / hydrogen ion transporting ATPase, rotational mechanism. Identical to Probable vacuolar proton pump subunit F (VATF) [Arabidopsis Thaliana] (GB:Q9ZQX4); similar to hypothetical protein [Vitis vinifera] (GB:CAN63147.1); contains InterPro domain ATPase, V1 complex, subunit F, eukaryotic; (InterPro:IPR005772); contains InterPro domain ATPase, V1/A1 complex, subunit F; (InterPro:IPR008218) Range:  from: 1149248    to: 1151346    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g02630.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G01540.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61369.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 1151613    to: 1153356    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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