Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                         <---------ICU4                                                                                       --------->YAB1                                                                       ----------------->AGL2                                                                <---------ARR11(3)    <---------YAB1                                                     <---------ZAT14   ----------------->AGL3             ----------->HVH21                       --------->At4g35610--------------->AGL15             <---------ZAT18                         --------->ZAT14   <-----------------AGL2            <---------------------WRI1               <---------At4g35610<---------------AGL15           <---------At4g35610                       <---------ZAT2    ----------------->AGL1<-------           --------->At4g35610                       --------->ZAT2<----------DOF2  --------->YAB1         <-----------RAV1(2)                  --------->MYB46(3)--------->ARR11(3) <------ZmHOX2a(2)     --------->MYB52(1)            ----------->RAV1(2)          <-----------GT1   <---------ARR14(2) ------->ANAC58                    <---------At4g35610      <---------RVE1(1)     <---------ARR11(3) ------->ANAC58     --------->ANAC58     <---------ICU4     <---------CCA1(1)     --------->ARR14(2) ------->ANAC46     --------->ANAC58     --------->YAB1    <---------ARR11(3)     --------->ARR11(3) -->GT1 ------->GAMYB     --------->YAB1<---------YAB1     --------->ARR11(3)    <------ZmHOX2a(1)   caagaaacaacgcaggggacacaaacaatgagattacacctgatcataacaactgagcagagatattatcttttccatttagaggatcatcatcagattt  1147200         <-------TEIL<---------ANAC46         <---------LBD16       --------->ARR14(2)                        <---------AHL20(2)   <---------At5g28300       <---------ARR14(2)                 <---------ANAC46           <-----------GT1 <----------DOF2  <---------TOE2(3)       <---------ANAC58      ---------->DOF2      <---------YAB1 --GLK1(2)      <---------ANAC46          <---------ANAC58----------->GT1   <----------DOF2         -   tagcttcaaggtccggttttgtggtttatacataagttatagtgacttgatttttttgttttgttacaaagttaccatctttggattagaattgggaaat  1147300                                                                          <---------ANAC46                                                               <--------HAHB4                                                               <---------AHL20(2)                                                               --------->ATHB51                                                               --------->AHL20(2)                                                               --------->YAB1                                                               <---------ICU4                     ---                                                               -------->ATHB1                   -----                                                              <---------ATHB12                  -----                                                              --------->ICU4                   ------                                                              <---------ATHB51                -------                                               <---------GLK1(1) <---------YAB1               -------                                              <---------ARR14(2)--------->AHL20(1)           <------- ------>TEIL                                  --------->ARR14(2)<---------AHL20(2)           --------   tgaatctgtttgtatattgtattatttggaacattgtggatgcccatggatatgtttctgttcaattattttggttttgggtaatgaaatttgaaaccaa  1147400          <---------AHL20(1)          --------->AHL20(1)          <---------ARR11(3)          --------->ARR11(3)                             <-------TEIL ---->GAMYB                                          --------->DAG2 ->MYB46(1)                                          <---------------AtSPL3                         < ->MYB83 --------->YAB1                              --------------->AtSPL8                       --- --->MYB52(1)                               --------->ALFIN1  <---------AHL20(2)               ------ -->TOE1(2)                        <---------ANAC58  <---------------AtSPL8                    ------ -->TOE2(2)                   <------MYB83  <-----------RAV1(1)                          --------->ZAT14 --MYB52(2)                   <------MYB46(1)  ----------->GT1--------->AHL20(2)         <---------ZAT14 ->MYB46(3)         <-------GAMYB  <---------ANAC58 ---------->DOF2                  <---------------AtSPL8   cgaaaaaccaaaaatattcttcagttggaatttggtttcttacaatgtgttggaaaaagtacatttaaatttcaagactttggatttgttgtacagtaag  1147500              ----------->GT1             <---------TOE1(3)       <---------YAB1                                                          <-----------GT1     --------->YAB1                                        ------>NtERF2      <---------CCA1(2) --------->AHL20(2)      <---------MYB52(1)             <---------ATERF1(1)<----------DOF2 ---------ATHB12       ----------->GT1         ----------->GT1    <---------AHL20(2)            <---- ------>WOX13(1)   <-----------GT1            <---------YAB1      --------->AHL20(2)         <------- --->ANAC58  <---------TOE2(3)     <----------DOF2  <-----------GT1 <---------YAB1       <----------DOF2 --->ANAC58  --------->MYB59    <-----------GT1--------->ATHB12  --------->AHL20(2)      <---------DAG2   caatcaaatatgatttaggttaaaccggttaattttactttggtttggatgattaaaccggctccaaattaatattccttttatctctctgctttttact  1147600                                                                                           <------MYB46(1)                                                                                           <------MYB83                                                                                          <---------MYB46(3)                                                                                          <---------AtMYB61                                                                                         <---------MYB52(1)                                                                                         <---------MYB55(1)                                                                                         <--------P                                                                =====================HOX2a_HOX2a  ---                                                                ------>ZmHOX2a(2)       <-------GAMYB                  <---------ALFIN1                              =========================HOX2a_HOX2a                ----------->RAV1(1)                           ------->TEIL    ------>ZmHOX2a(1)------             --------->ANAC58                                 <-----------ARR10        <---------MYB46(3)             --------->ANAC46                                 --------->ARR14(2)    ------------>AtMYB77       <---------ZAT6  <-----------HVH21                      <---------ARR14(2)    <---------ALFIN1 ------DOF2  --------->ANAC58                                 --------->ARR11(3)   <---------REM1(2) ----GT1   ---------->DOF2        *TSS                        <---------ARR11(3)  ------>ZmHOX2a(1)   tttgtacgagagttaaagccacactagtcactcgcgctagtctcttcttcgaacgcttgcaatggatcttctcaagactccttcctccacggttggtcta  1147700                          --------->ANAC58                 <---------DOF5.7(2)                 ---------->DOF2      --------->AHL20(2)     ---------->DOF2          <---------MYB52(1)        ----------->GT1   --------->MYB46(3)    <---------HSFB2a(1)   --------->ANAC46            <---------ATHB12            <----------DOF2 ------>YAB1 <------MYB46(1)  ---------->DOF2       --------->WOX13(1)    <---------YAB1 --->WOX13(1)<------MYB83 --------->ANAC58     XXXXXXXXXXXXXXXXXXXX>MIR2934   <-----------GT1   tcagaaacattcgctaggttaaagtcacaaggcaaagtaagtaaattctctcttcaatcaccctaaagtttcaatttttatttcctttctctattcgatt  1147800                                                                   <---------ARR11(3)                                                                   --------->ARR11(3)                                                                 ------>ZmHOX2a(1)      <---------ARR11(3)                                     <---------YAB1            ------>ZmHOX2a(2)    ---------->DOF2                                 <------NtERF2               --------->ARR11(3) ------->GAMYB          <---------MYB46(3)   --------->ALFIN1         <---------MYB46(3)   ----------->RAV1(1)   <-       <---------MYB46(3)    <------MYB46(1)          --------->At4g35610   --------->REM1(1)      <-      <---------WOX13(1)     <------MYB83             <---------At4g35610 --------->HSFB2a(2) -------    --------->ATHB12        --------->MYB111(1)       --------->ZAT2      <---------HSFB2a(2)--------   <---------YAB1           <---------AtMYB61         <---------ZAT2 ------>ZmHOX2a(2)  --------->ARR11(3)   tgttcttgattgttgttgaaaacaattttgtaggtggctctgattccatatatcacagctggtgatcctgatctttctacaacagcgaaagctcttaaag  1147900                 ----------->RAV1(1)                 ------>NtERF2                ----------->HVH21             <---------PCF2                                                           ------>ZmHOX2a(1)      <---------ANAC46                                                            --------->ARR14(2)      <---------ANAC58                                                --------->WOX13(1) ---------->DOF2      <---------ANAC58                                             --------->ANAC58  --------->TOE2(3)  --------->ATHB12                                      <---------At4g35610       <---------ARR14(2) --------ANAC58 <---------ETT(1)                        --------->At4g35610     ----------->ARR10 --------ANAC58<------NtERF2                         <---------MYB52(1)   <-----------RAV1(2)   <---- -->DAG2  --------->ALFIN1                        ------>ZmHOX2a(2)--------->ANAC58<------ZmHOX2a(2) -->DOF2<-----------RAV1(1)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)   <-------TEIL ---------   tgcttgattcgtgtggctccgacataatcgaactcggtgttccatactctgatccattagctgatggtccagcaatccaggttcgatcctcaaaagctgc  1148000                                                                                    --------->DOF5.7(2)                                                                    --------->ANAC55(2)                                                                    <---------ANAC55(2)                                                  <---------At4g35610              --------->TOE1(3)                                                  --------->ZAT2 <---------MYB52(1)--------->TOE2(3)                                                  --------->At4g35610  ---------->DOF2         <-----       --------->YAB1                   <-----------HVH21      --------->MYB52(2)  <----------DOF2      <---------ATHB12               <---------ANAC58          <---------MYB46(3)------>MYB83<-------    --------->WOX13(1)               <---------ANAC58         <-------TEIL    --------->MYB46(3) -----ALFIN1              <----------DOF2<---------YAB1      <---------MYB52(1)  ------>MYB46(1) >At4g35610 --------->At4g35610   <----------DOF2 <---------ZAT2<-------GAMYB --------->DEAR3(2) ----   acatttcaatcatcttctgaatattgaactttctctctttcttgtcataggctgctgcgagacgttcgttacttaaaggaaccaactttaactccattat  1148100  Previous    Next  AGI:  At4g02600.1    Description:  ATMLO1/MLO1 (MILDEW RESISTANCE LOCUS O 1); calmodulin binding. Identical to MLO-like protein 1 (MLO1) [Arabidopsis Thaliana] (GB:O49621;GB:O22766); similar to MLO15 (MILDEW RESISTANCE LOCUS O 15), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G44110.2); similar to MLO15 (MILDEW RESISTANCE LOCUS O 15), calmodulin binding [Arabidopsis thaliana] (TAIR:AT2G44110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO46388.1); similar to barley mlo defense gene homolog8 [Zea mays] (GB:NP_001105171.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96389.1); contains InterPro domain Mlo-related protein; (InterPro: Range:  from: 1143999    to: 1147409    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g02610.1    Description:  tryptophan synthase, alpha subunit, putative. similar to TSA1 (TRYPTOPHAN SYNTHASE ALPHA CHAIN), tryptophan synthase [Arabidopsis thaliana] (TAIR:AT3G54640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60260.1); contains InterPro domain Triosephosphate isomerase; (InterPro:IPR000652); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785); contains InterPro domain Tryptophan synthase, alpha chain; (InterPro:IPR002028) Range:  from: 1147634    to: 1149336    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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