Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                   <---------ANAC55(2)                           <---------AHL20(2)                           --------->AHL20(2)                           <---------AHL20(1)                           --------->AHL20(1)                                             <------ZmHOX2a(2)                  <---------MYB46(3)                        --------------->AGL15        <---------ARR14(2)                --------->At4g35610                         <---------------AGL15        --------->ARR14(2)                <---------ZAT2   <---------ANAC58           <----------DOF2          ------->TEIL                <---------At4g35610                     <----------DOF2         --------->YAB1            --------->ALFIN1     <---------ANAC58<----------DOF2                <---------ICU4 ------         <-----------RAV1(1)     --------->ANAC55(2) <-----------GT1           --------->ICU4<-------     <--------P --------->ZAT2 <-----------GT1   <---------DAG2    ----------->GT1  --------->MYB52(1)   ----------->GT1--------->ALFIN1     >>>>>>>>>>>>>>>>>LFY<-----------------AGL2 <---------YAB1   tgaacgggttaatggtggagctggtggattatattacttgattccaatgtgcttttttctttcttttttgggttaatatgaattatgaacggatcatcaa  1134100                                  --------->ANAC58                                   --------->ANAC46                                  --------->ANAC58                       --------->LBD16  <---------ARR11(3)              --------->ANAC46                      <---------ANAC46  --------->ARR11(3)      --------->YAB1----------->GT1                <-------TEIL<-----------GT1 ---->DOF2     <---------REM1(2)<-----------GT1                        <---------LBD16<-------------- --YAB1        <---------ZAT14--------->CCA1(2)--------->GLK1(2)      --------->ALFIN1---------------   agacgatatttggagcctacacagagaatgatatatacgacatggagaaattctgttcatatatgttttgaggtgcggagtcattttactccatcgagca  1134200                                                         --------->ZAT14                                                         <---------ZAT18  --------->TOE1(2)                             ----------->GT1             --------->ZAT18 --------->At4g35610                   <---------ANAC58               --------->ANAC58     --------->DAG2                   <---------ANAC46               --------->ANAC58    ---------->DOF2            ----                   <---------ANAC58             <---------ICU4    <---------YAB1  ----------->ARR10             <---------AHL20(2)          ---------->DOF2 <---------ZAT14 --------->ZAT2         <---- -AGL15  <----------DOF2  --------->GLK1(2)     --------->YAB1  --------->YAB1   <------ZmHOX2a(1) >AGL15  <---------DAG2  <---------GLK1(2)    --------->GLK1(2)<---------YAB1<---------ANAC46 -------   aatgtttctcactttttatttgcttgagattctgttaaacaaacaaagaatcatgccattgcactatgatgaaaaagctgcgaggagatgtgcaaattat  1134300                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                      --------->AHL20(1)                                                      <---------AHL20(1)                                                  <---------AHL20(2) --------->GLK1(2)         <---------ICU4         --------->AHL20(2)                       ------>ZmHOX2a(1) ----->YAB1          <----------DOF2          --------->AHL20(2)               <---------TOE1(2)    - -----YAB1       ------->GAMYB                <---------AHL20(2)   ---------->DOF2 ------->TEIL    -- -->YAB1      --------->MYB52(1)            <----------DOF2     <----------DOF2<---------TOE2(2)  ---   aagaatcagcaaattccaacgggcttcaagtattacatgtatgggcctttaattaataaaatgggcctttaaagctactcgtatgtatcagtcctaaacc  1134400                                                                           <---------ZAT2                                                                           <---------At4g35610                                                                           --------->O2                                                                         <-----------RAV1(2)                      ---------->DOF2                                 --------->ANAC46                 --------->AHL20(2)                                 ------>ZmHOX2a(1)              <---------ICU4                                       *TSS------>NtERF2             <---------ATHB12                                      --------->TOE2(2)         ------------>CBF                  --------->ANAC58        --------->TOE1(2) -------->YAB1--------->YAB1               --------->ANAC58       ----------->RAV1(2) ------->DAG2<---------ATHB51           <---------At4g35610    --------->WOX13(1) ------->DOF2--------->ICU4        <---------YAB1            ------------>CBF----------->HVH21   aaaagtaatagaccaataatgaattaaagtcaggcttattttagcaggcccatagaggctatagtcaatcctgcgccaggtgatagtgagataccgagtc  1134500                                                 <---------ANAC58                                                 <---------ANAC58                                                 <---------ANAC46                                              --------->TOE2(2)                                              --------->TOE2(3)                                 --------->At4g35610     <---------CCA1(2)                                 <---------At4g35610   <---------ANAC58                  <---------ANAC58               <---------At4g35610 <------ZmHOX2a(2)   <---------ANAC58                  <---------ANAC58       <------------------------ANAC81        --------->TOE1(2)                         --------->STY1(2)     <---------TOE2(2) ===================HOX2a_HOX2a--------->ALFIN1                   <---------STY1(2)     <---------TOE1(2) ------>ZmHOX2a(1)     <---------HSFB2a(1)   ------>ZmHOX2a(1)   ------>NtERF2-   tagctccttggtttctctgcttctccttctctctcagatcaaaaaaaaccttcgtgtgcgtctctcgtcctctaaattgtcgaaaatgctggctaggctc  1134600                                                 <---------TOE2(2)                                                <-----------RAV1(2)                                           --------->MYB46(3)                                          ------>MYB46(1)                                          -------->P                                        --------->AtMYB61                      <-----------HVH21 ------->GAMYB                    ------>ZmHOX2a(2)   <---------MYB111(1)                    <-------TEIL       <---------MYB55(2)                   <------ZmHOX2a(2)   --------->MYB46(3)                       <---------GLK1(2)                  <---------ARR14(2)   <---------MYB52(2)                      <---------At4g35610 --                  --------->AGP1      --------->ANAC58                         --------->At4g35610---                  --------->ARR14(2)  --------->ANAC58                         <---------ZAT2     <--                  <---------ARR11(3) --------->WOX13(1)                   ------>ZmHOX2a(1)  <-------                 <---------GLK1(1)  <---------WRKY12                      ===========================             <---------HSFB2a(2)   --------->WRKY18(1)                    ===========================     --------->HSFB2a(1)           <---------MYB52(1)                <---------ANAC58       ---------     --------->HSFC1(2)           --------->LBD16<---------TOE1(2)   <---------ANAC58       <--------     <---------HSFC1(2)<---------MYB52(1) ------>MYB83           <---------ANAC58         <---------MYB52(1) ----->NtERF2--------->HSFB2a(2)  <-----------HVH21              <---------ANAC58      <---------LBD16   gctgcgaagcgtcttctcgagatccgtcaagttttccgtcaaccaacctctcaggtattctctaattccttgcttcctctcagcttctctccggtcgttt  1134700   ------>ZmHOX2a(2)  <------ZmHOX2a(2)                                                                --------->GLK1(2) <---------ARR14(2)                            <---------ANAC58                   --------->KAN4(2) --------->ARR14(2)                            <---------ANAC58                  <---------GLK1(1) ------->LBD16                               <---------TOE1(2)                  --------->ARR14(2) ------>HSFB2a(2)                           <---------CCA1(2)             <-----------RAV1(1) -------HSFB2a(2)                       <---------ANAC46                  <---------ZAT6 --DEAR3(2)                          ----------->HVH21              --------->O2<---------ARR14(2) =========HOX2a_HOX2a              --------->At4g35610              --------->ANAC55(2) ========HOX2a_HOX2a   <XXXXXXXXXXXXXXXXXXXXXMIR173                 <---------ANAC46 >MYB52(2)    <---------MYB52(1)   <---------At4g35610  ------>NtERF2     --------->ALFIN1 -MYB46(3)<-----------------AGL1 <-----------RAV1(2)--------->ETT(2)<---------ANAC55(2)       ------>ZmHOX2a(2)   cccgatctcattctccgttttggtcatttctatctacaggtgactcgtagcttatcgacggccttaaactacgtgagtgttggatattctatctgatcta  1134800                                                                                                -----                                ----------->GT1                                                 <----                                --------->YAB1                                            ===========                            --------->AHL20(1)                                            --------->LBD16                            <---------AHL20(2)                                            ===========                            --------->AHL20(2)                                     <---------ARR14(2)                           --------->AHL20(2)                                      --------->ARR14(2)                       --------->LBD16                                             <---------GLK1(2)                      --------->ANAC46                               <---------ANAC55(2)  ------>ZmHOX2a(1)                 <---------AHL20(2)                            <---------YAB1 --------->At4g35610                --------->AHL20(2)            <-----------RAV1(1)    <---------ANAC46   ----------->RAV1(2)   tgcttcaattttgtctaattttatccgaaattaattgtaatttgatttttgttgttgttgttgttttgattacttatagcatctggattctcctgataac  1134900      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    --------->ARR11(3)                    <-----------HVH21    <---------ARR14(2)                  <---------TOE1(3)    <---------ARR11(3)                  <---------TOE2(3)    --------->ARR14(2)             ------>MYB46(1)                            ----------->GT1     --- ---->MYB46(3)                     ------>MYB83                            ----------->TGA1       <-- -----MYB52(2)                    --------->WOX13(1)                     <---------ICU4           <-- ===========HOX2a_HOX2a         --------->MYB46(3)  --------->AHL20(2)   --------->YAB1<---------At5g28300 ============HOX2a_HOX2a<---------At4g35610  ----------->GT1            --------->ICU4<-----------GT1   aaacccgatcttccatgggagttttcagaggctaaccaatctaaggtcagtgaataaaatcgcttcttaatgtgataatgacgaaaatttacagttttag  1135000  Previous    Next  AGI:  At4g02580.1    Description:  NADH-ubiquinone oxidoreductase 24 kDa subunit, putative. Identical to NADH-ubiquinone oxidoreductase 24 kDa subunit, mitochondrial precursor [Arabidopsis Thaliana] (GB:O22769;GB:Q940Z9); similar to unnamed protein product [Vitis vinifera] (GB:CAO22632.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain NADH dehydrogenase (ubiquinone), 24 kDa subunit; (InterPro:IPR002023); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 1134467    to: 1137156    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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