Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                             ------->GAMYB                                                                          <-----------------AGL2                                                                          --------->MYB46(3)                                                                          <-----------------AG                                                                         ------>MYB83                                                       <-----------------AGL1   ------->MYC3                                                    --------->GLK1(1)    ------>MYB46(1)                                               --------->At4g35610       -------->P    --------->ALFIN1                                  <-----------RAV1(2) <-----------------AGL1    <-------MYC3                               --------->ZAT2  <---------At4g35610      --------->MYB52(1)                               <---------ZAT2  <---------ZAT2           --------->MYB55(1) ------->At4g35610     <---------GLK1(1)  --------->HSFB2a(2)          --------->AtMYB61 --------At4g35610 <---------TOE2(3)      <---------HSFB2a(2) <----------ID1--------->LBD16      <--- ------HVH21    <---------YAB1 <---------At4g35610  <---------GLK1(1) --------->MYB46(3)         ----   cagaagaagactcatcttatgaaggaaacctcgagctcaggcttagggaagctgatttcccaataggccaaaaccaaccgcatatgggagtgtctctaaa  1092300                                  --------->ANAC46                                  --------->ANAC58                             --------->ARR14(2)                             <---------ARR14(2)                      <---------At5g28300                   <-----------HVH21                  ------->GAMYB   --------->ANAC58                ----------->GT1         <---------YAB1     --------->WOX13(1)                   <---------TOE2(3)                  < ------AHL20(2)  --------->ZAT6--------->TOE2(2)               ---------->DOF2         ----------->HVH21 ----->AHL20(2)<-----------GT1 --------->TOE1(2)<-----------RAV1(1)        <----------DOF2         <-   aaattcgaaagatgatttaacagtcacagccaatctacgacatcaagtctctgtgggaagacagacaaaggtaacaacttttgtaagtcttgacagcaag  1092400                                      --------->At4g35610                                   <------ZmHOX2a(2)                                              ---               <-----------HVH21 --------->At4g35610                                              <--            <---------At5g28300  <---------At4g35610                                              <--           <-----------GT1  --------->At4g35610                                           -------->P      --------->ALFIN1      --------->ZAT2                                                ------>MYB83   --------->LBD16          <---------At4g35610               <---------At4g35610--------->bZIP60(1) ---------ARR14(2)      --------->MYB52(1)         <-----------HVH21             <---------bZIP60(1) -----ZmHOX2a(1)      --------->MYB46(3)      <---------WOX13(1)            --------->O2  ------>MYB46(1)   aggaccgggtgtttcactgtccgaacaaacagctcagatcagttgcagattgctgtcatggctctgcttctccttgccatgtgatgtcaacctacatgaa  1092500                                                        <---------ANAC58              ---------->DOF2                     --------->AHL20(2)             <------ZmHOX2a(1)            <------MYB83  <---------ANAC58          --------->At4g35610             <------MYB46(1)   <---------ANAC58       =============HOX2a_HOX2a          <---------TOE2(3)  <---------ANAC58                      ---       <------ZmHOX2a(2)                 --------->MYB59--------->ANAC55(2)                   -------       =====================================HOX2a_HOX2a <---------ANAC55(2)                 <-------- ------>ARR11(3)                     <------ZmHOX2a(1)<-----------GT1                     --------->AHL20(2) -------GLK1(2)                 <----------DOF2   <---------AHL20(2)             <---------AHL20(2) -------ARR11(3)               <---------ICU4     <---------YAB1----------------->AG      <---------AHL20(2)   gatttttcgatcagaggaaagaactgatattaatctttaggattaggttgttttaattacgttcttgccaaatttgatttgattttatggaattaattgt  1092600                                         --------->YAB1                                       <---------WOX13(1)                                      <------------CBF                            <---------ANAC58                                              --------->MYB52(1)                            <---------ANAC58     <------MYB83                            <---------ATHB51                            --------->ANAC55(2)  <------MYB46(1)                         <---------AHL20(2)     --------->ALFIN1       <---------ANAC46    --------->MYB111(1)                  --------->AHL20(1) ------->DOF2  <---------AHL20(2)    --------->ATHB12                                <---------AHL20(2) -->YAB1       --------->AHL20(2)   <---------YAB1      ---------->DOF2          *TSS--------->AHL20(2) ----CBF     <-----------TBP<---------ANAC55(2) --------->MYB59                 --------->AHL20(2)  -   aaaagacttggggctatttatatgaaagtttcgtgattttcattgataagtaggtcgtcaaagaaatagagaagaagcccaaaaaaataaaataatggac  1092700                                                                                                    -                                                                                                   <-                                                                                                   <-                                                                                                  <--                                                                                                 <---                                                                                              <------                                                                                             <-------TEIL                                                                  <------NtERF2             ---------                                                                 --------->LBD16            ---------                                                                 <------NtERF2              ---------                                                               <---------LBD16             <---------ARR14(2)                                                             <---------SPL7                --------->ARR11(1)                                                            ------>ZmHOX2a(2)              <---------GLK1(2)                                                           --------->RAP2.6(3)             --------->ARR14(2)                                                           <------ZmHOX2a(2)              <---------GLK1(1)                                                          <---------ARR14(2)              <---------HSFB2a(1)                                                  <---------GLK1(1)                       --------->HSFB2a(1)                                                  --------->GLK1(1)                       --------->GLK1(1)                                    <---------At4g35610   --------->ARR14(2)             ----------->ARR10          --------->GLK1(2)      <-------TEIL    --------->ARR11(3)                   ------>ZmHOX2a(2)   --------->At4g35610 <----------DOF2           <---------ARR11(3)                 <---------ARR14(2) --------->DOF2   <---------At4g35610            <---------ARR14(2)  ---------->DOF2--------->ARR14(2)   gaagaagcagagaatttgagagcagcttttggcgattcatcggatgatgaagatatcgcagatcggccgggaaaagaaaccatagggatcggagattcgg  1092800 -------->ALFIN1 -----NtERF2 --------SPL7 -------DEAR3(2)                                                                              ------- ------DEAR3(1)                                                                    --------->LBD16 ---DEAR3(1)      ----------->GT1                                                  ------>NtERF2 >CCA1(2)        <------ZmHOX2a(1)                                                --------->ANAC46 >GLK1(2)      <---------ANAC46                                                  <---------LBD16 >ARR14(1)  --------->ALFIN1                   <----------DOF2             <-----------GT1  ---------   cggtatgggagagagtggaggagataaatggtttatggctctatagaaactttctctctattgctcatcagtctcatttactctccgccattctaaacgg  1092900                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                  <--                                                                                               <-----                                                                                               <-----                                                                                               <-----               <---------MYB46(3)                                                              ------               --------->MYB52(2)                                                    --------->At4g35610               <------MYB83              <----------DOF2                  --------->AHL20(2)   <-----               <------MYB46(1)          <---------ANAC58         --------------->AtSPL8       -------              <---------TOE2(2)         <---------ANAC58         <---------------AtSPL8    <---------HSFB2a(1)  <---------MYB52(1)      --------->TOE2(3)  ---------->ID1  <---------TOE2(3)       <---------At4g35610 -->ANAC46    <---------TOE1(2)    <-----------RAV1(1)      ---------->DOF2   <---------ICU4  <------ >MYB52(1)   <---------MYB52(1) <-----------RAV1(1)     --------->ZAT6    <---------AHL20(2) <-------   tacccttggctcttcgttggtttctaattcttaaatgttgttgctttgtcgaattgtttcactaaagtttgtacatttaaaaatttctgcagaaggttgg  1093000 -------GAMYB ------->MYB52(2) --------MYB46(3) -----TEIL -MYB46(1)                                                                                        <-- ----DEAR3(2)                                                       <------NtERF2          <---------ANAC58 -MYB83                                 <---------ANAC58       --------->ALFIN1            <---------ANAC58 --->MYB55(2)                  --------->TOE1(3)            --------->ARR11(3)       <----------DOF2 ----MYB46(3)            <---------HSFB2a(2)           --------->LBD16            --------->ARR11(3) -->MYB59      <-----------GT1 --------->TOE2(3)      --------->HSFB2a(2)         <---------ARR11(3) ---AtMYB61    <<<<<<<<<GT-1<<<<<<<ZML2 <---------ANAC58    <---------ARR11(3)   <---------GLK1(1)--- -P     --------->GLK1(2)--------->HSFB2a(2)          <---------HSFB2a(2)  <----------DOF2<---------At4g35610   ttcgttgaagaatctattaaccaggtactagaaccctaaatttcgtttctcttcttccccaagatgtggaggcaatgctttagaaatcttttagcttatc  1093100            <----------DOF2         --------->ARR11(3)         <---------ARR11(3)        --------->RVE1(1)        <---------RVE1(1)        <---------CCA1(1)        --------->CCA1(1)        --------->GLK1(1)        <---------GLK1(1)                                                  -------->HAHB4       --------->ARR11(3)                                                  <---------ICU4       <---------ARR11(3)                                                  <---------AHL20(2)  <---------ANAC58                                                        --------->ICU4  <---------ANAC46                    ----------->GT1             <-----------RAV1(1)  <---------ANAC58            ---------->ARF1          --------->GLK1(1)  <---------YAB1 --------DOF2                 ---------->ID1     --------->MYB52(1)  ----------->GT1     --------->YAB1 --->ZmHOX2a(1)  <----------DOF2  <---------ALFIN1     <---------GLK1(1)  <---------ATHB51   ctttgcttagatatcttttcttttctcttcttgtccccaactgttataaactactggatttcaaacctctgtggtaattattcgattgcattaataagag  1093200  Previous    Next  AGI:  At4g02482.1    Description:  chloroplast outer envelope GTP-binding protein, putative. similar to TOC159 (PLASMID PROTEIN IMPORT 2) [Arabidopsis thaliana] (TAIR:AT4G02510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39987.1) Range:  from: 1092002    to: 1092484    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g02485.1    Description:  oxidoreductase, 2OG-Fe(II) oxygenase family protein. similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G31600.3); similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G31600.2); similar to oxidoreductase, 2OG-Fe(II) oxygenase family protein [Arabidopsis thaliana] (TAIR:AT1G31600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39985.1); contains InterPro domain 2OG-Fe(II) oxygenase (InterPro:IPR005123) Range:  from: 1092681    to: 1094597    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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