Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         ------>ZmHOX2a(2)                                                       ====================HOX2a_HOX2a                                                      <------ZmHOX2a(2)                                                      =====================HOX2a_HOX2a                                                     <---------ARR11(3)                                                     --------->ARR14(2)             --------->HSFC1(2)                              --------->LBD16        <---------ARR14(2)             <---------HSFC1(2)                              ------>NtERF2         ===================================HOX2a_HOX2a                            <---------LBD16         <------ZmHOX2a(1)               --------->HSFB2a(1)                          --------->ARR14(2)   <------ZmHOX2a(2)                    <---------HSFB2a(1)                          <---------ARR14(2)   ============================HOX2a_HOX2a                   --------->ARR14(2)         --------->ARR14(2)                   <---------ARR14(2)                   <---------ARR11(3)         <---------ARR14(2)                ------>ZmHOX2a(2)                   <---------ARR14(2)    --------->GLK1(2)             <---------GLK1(2)    <---------ANAC58--------->CCA1(2)   --------->ARR14(2)          ===================HOX2a_HOX2a    <---------ANAC58<------ZmHOX2a(2)   <---------GLK1(2)--------->LBD16   <---------HSFB2a(2)  ----- -->LBD16          --------->ARR11(3)   <---------ARR14(2)      --------->ARR14(2) <-----------ARR10 ->ANAC46    <-----------RAV1(2) --------->GLK1(1)--------->LBD16   ------>ZmHOX2a(1)        <------- -LBD16     <------ZmHOX2a(2)<---------RAP2.6(2) <---------LBD16<---------ARR14(2) --------->ARR14(2)   tccatagcctgtggatcagaagatccaagttccggctctccagattccgatccaggatccgaagcaggtccttgattctcgatcggaacttcgctcgctg  1088400                          --------->STY1(1)                        <------NtERF2                      --------->DEAR3(1)                     <------NtERF2                    <-----------HVH21                    <---------ATERF1(1)                       --------->LBD16                   --------->O2                              --------->LBD16                   --------->RAP2.3(2)                       --------->ANAC46                   --------->DEAR3(1)                       <---------LBD16                   <---------O2                             --------->LBD16                  --------->ATERF1(1)                     ------>ZmHOX2a(2)                  --------->RAP2.3(1)                    --------->GLK1(1)                 ------>NtERF2                           <---------GLK1(1)              <---------ATERF1(1)                        <------ZmHOX2a(2)             --------->ARR14(2)                         --------->ARR14(2)           <---------ATERF1(1)                          --------->ARR11(3)           <---------DEAR3(2)  <---------GLK1(1)        <---------ARR11(3)        ------>MYB83------>NtERF2                       <---------ARR14(2)        ------>MYB46(1)------>NtERF2                    --------->AGP1      <-----------RAV1(2) <---------STY1(1)             <---------GLK1(2)   <---------ARR14(2)--------->ATERF1(1)               <---------At4g35610           <-------TEIL ---->At4g35610  --------->LBD16                       --------->At4g35610         --------->ARR14(2) --At4g35610 <---------ARR14(2)--------->GLK1(1)--------->AHL20(2)                 <---------ARR14(2)   atgaagaaccagccggttccgccgtcgcctagggtttccaaaattcaaaaaaaaatcagatccccggagaaacaagattaacccagattcaaaaatcgag  1088500                                                                     --------->YAB1                                                                     ------>ZmHOX2a(2)            <--                                                                   <---------ARR11(3)     --------->MYB59                                                             <------NtERF2 --------->TOE2(3)      ---                                             --------->HSFB2a(2)   --------->ARR11(3) <---------MYB46(3)                                   --------->ZAT18          --------->RAP2.6(2)     <---------ANAC58                                  --------->ANAC58        --------->At4g35610       <---------ANAC58                                  --------->ANAC58        <---------At4g35610       <---------ANAC46                            ---------->DOF2  <---------HSFB2a(2)<------NtERF2     ------>ZmHOX2a(2)      --------->YAB1     <------ZmHOX2a(1) <-------TEIL--------->At4g35610 --------->TOE1(3)   <-----   agaaggaatcaaaaactggaattgggaggaaaaagaacgcacaggttcgagagaagaagcagcggcatcgatcttaaccttagatcgcttgttaggcctt  1088600                                                                 --------->O2                                                                 <---------O2      --------->ANAC58                                                            <---------O2     <---------ARR11(1)                                                            --------->O2     --------->ARR14(2)                                                            --------->REM1(1)<---------ARR11(3)               --------->LBD16                  --------->At4g35610          <-----------ARR10             <-----------RAV1(2)    <---------GLK1(2)       <---------ANAC55(2)    --------->ANAC46 -------HSFB2a(2)        >>>>>>>>>TBF1          <---------At4g35610         <---------CCA1(2)     <-- ------>HSFB2a(2)     >>>>>>>>>TBF1 <---------ARR14(2)      --------->ANAC55(2)    --------->ANAC58 -----DOF2 <-----------HVH21        --------->ARR14(2)     <-------TEIL   --------->YAB1     <-------   tgagaagaagatgcttcaggggaagaagaagaagcacagaaacgcttggaagcggaagagctacgtctcgtctcaaccatatctcacgaccctctctttt  1088700                                                --------->HSFB2a(2)                                                <---------HSFB2a(2)                                                <---------------AGL15                                                --------------->AGL15                                               ----------------->AGL2                                               ----------------->AGL1          >>>>>>>>>WRKY18              <---------MYB52(1)     ------>NtERF2                <---------ARR14(2)    --------->ANAC46       ---------->DOF2<------MYB83                                        <------ZmHOX2a(1)   <---------LBD16       ------>ZmHOX2a(2)<------MYB46(1)                               <------ZmHOX2a(1) --------DOF2      <----------DOF2--------->ARR14(2)     ---------->DOF2             --------->CCA1(2) ---DOF2  <---------WRKY18(1)   ----------->ARR10--------->LBD16                  <---------ZAT6   ctttctccgccttgacttcgcctttgatccaaagaagagccgcttggtttcccgatagagaaagagagagaagacaagagattagagataggagaaggat  1088800                                                     <---------YAB1                                                   <---------ICU4                                                   --------->YAB1                                                   --------->ATHB12                                                   -------->HAHB4         --------->AHL20(2)                                                  <---------ATHB12        <---------AHL20(2)                                            <---------ANAC55(2)       <---------AHL20(2)                                        --------->ARR11(3)            --------->AHL20(2)                                       <---------GLK1(1)       <------MYB83                                       --------->GLK1(1)       <------MYB46(1)--------->AHL20(2)                                      <---------ARR11(3)       ----------->GT1<---------AHL20(2)  <--                    --------->GLK1(1) --------->ARR11(3)      <---------AtMYB61          --------->TOE1(2)             ---------->DOF2 --------->GLK1(2)*TSS--------->ICU4 ------------>CBF --------->YAB1  <--   agagcgagagagagagaaagagaaatcgaagaatcagagagatatcatgtaaatgattactgggatggtcaatttataaattaaacataaacctgcaaaa  1088900                                            --------------->AtSPL8                                            --------------->AtSPL3   <---------AHL20(2)                 <------------CBF          <---------At5g28300    --------->AHL20(1)               <---------AHL20(2)         <-----------GT1         <---------AHL20(1)         <---------AHL20(2)           --------->AHL20(1)         --------->AHL20(2)         --------->AHL20(2)           --------->AHL20(2)   <-----------HVH21        --------->AHL20(2)            <---------AHL20(2)<---------ANAC58     <---------AHL20(2)              <---------AHL20(2) --------->ANAC55(2)    <---------WRKY18(1)    <---------AHL20(2)               --------->AHL20(2) <---------ANAC58  --------->ARR11(3) -------DAG2   <---------YAB1    --------->AHL20(2)    <---------LBD16    <-----------GT1 --------DOF2<---------ICU4  <---------ANAC46         <-----------GT1--------->AHL20(2)   cttttttttatttaatttttattgtctctctgcgtttaaattaattactgtacattttacgggtcaaatatataaataacttgaccatcgatattccata  1089000                                                                    <---------AHL20(2)                      --------->RVE1(1)                            --------->AHL20(1)                    --------->YAB1                                 <---------AHL20(1)                   <---------YAB1                                  <---------ARR11(3)              --------->ZAT6    --------->AHL20(2)                 --------->ARR11(3)     <---------AHL20(1)         <---------AHL20(2)            <---------WOX13(1)     ----------->GT1     --------->AHL20(2)<---------ARR14(2)                   --------->ATHB12     <---------TOE2(3)  <     <---------AHL20(2)--------->ARR14(2)                  <---------YAB1       <-----------GT1 <----   tttttaaaaaatttgaacactataatatccgaatttaaatccacatatttatgtgtgtattttgattgatatatttgcatattaacaatgtaaattgact  1089100                     --------->AHL20(2)             --------->YAB1             <---------AHL20(2)             <--------HAHB4             <---------ICU4             -------->ATHB1             --------->ATHB51             -------->HAHB4            <---------YAB1            --------->ICU4         <---------YAB1         <---------AHL20(2)         --------->AHL20(2)        <---------AHL20(2)        --------->AHL20(2)                                                                <---------LBD16       --------->YAB1--------->AHL20(1)                                           ----------->GT1    <---------AHL20(1)                                                       <---------WRKY38(1)    <---------AHL20(2)   --------->AHL20(2)       ------>ZmHOX2a(2)   <xxxxxxxxxxxxxxxxsmallRNA(s)    <--------ATHB1   <---------AHL20(2)          <------ZmHOX2a(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    --------->AHL20(2)   --------->YAB1         --------->ARR11(3)   --------->ANAC58   --------->GLK1(2)    <---------ICU4  --------->AHL20(2)          <---------ARR11(3)   --------->ANAC46 --------->HSFB2a(1)    --------->YAB1  <---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)<---------DOF5.7(2)   --------->ICU4--------->AHL20(2)  --------->ANAC58        <---------ATHB12<---------WRKY12   <---------YAB1<---------AHL20(2)  --------->ANAC58      --------->WOX13(1)<---------WRKY45 --------->YAB1 --------->AHL20(2)   --------->ANAC46    <---------YAB1     --------->DOF5.7(2) ---------YAB1 <---------YAB1       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <-----------HVH21        < ------DOF2 <---------ATHB51       --------->ANAC46    --------->YAB1--------->ANAC58 <---------HSFB2a(1)   ttataataattttaattattaaaaaaattataaacacacacgacaatttagatcccataatcaatgaatacacgcttcgtcaacgagaaaattctggatt  1089200                                                                                               <-----                                                                                               ------                                                                                            ---------                                                                                         --------->ANAC58                                                                                         --------->ANAC46                                                  <---------MYB52(1)                     <xxxxxxxxxxx                                                  --------->DOF5.7(2)                    --------->ANAC58                                                 <-------GAMYB                          <---------TOE2(3)                                        --------->YAB1            --------->DAG2       <-----------GT1                                    <---------AHL20(2)           ---------->DOF2       --------->MYB52(1)                               ------>ZmHOX2a(2)--------->ANAC55(2)           <-------MYC3  <--------        <----------DOF2      --------->ARR11(3) <---------ANAC55(2)           ------->MYC3  ------->TEIL ---------ICU4         <----------DOF2  ----------->GT1    --------->WOX13(1)--------->ANAC46  ------   aaacattgtacttttgtttttatgtctttgtgatctatataatggtaattccgttatctataaatcaaaaagtacttacacgttggaattaacgcatccg  1089300  Previous    Next  AGI:  At4g02480.1    Description:  AAA-type ATPase family protein. similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT1G02890.2); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT1G02890.1); similar to AAA-type ATPase family protein [Arabidopsis thaliana] (TAIR:AT4G24860.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68283.1); similar to hypothetical protein OsJ_033404 [Oryza sativa (japonica cultivar-group)] (GB:EAZ19195.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO39989.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain AAA+ ATPase, core; (Inte Range:  from: 1081759    to: 1088846    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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