Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <-----------HVH21 ----->MYB83 ----->MYB46(1) ------>AtMYB61 ------>MYB46(3) -------MYB111(1)                                                           <---------TOE1(2) -------MYB52(2)                                                  <-------TEIL -------MYB111(2)                            <---------O2      --------->HSFB2a(1) -------MYB46(2)                             --------->O2      <---------HSFB2a(1)                 -- -------MYB55(2)                           <---------ALFIN1    --------->KAN4(1)            <-------- ----->ANAC58                   --------->ALFIN1    --------->ANAC58        <---------TOE2(3)   <---- ----->ANAC58                <---------DEAR3(1)     --------->ANAC58        <---------TOE2(2)   <---- -->At4g35610      --------->ZAT6  <---------MYB46(3)         <---------KAN4(2)             <--------   ccaaacccatcagaggctcaaacactagaagacggtgttgttgttccacttggcaaaccagtggaacgttcatgctccaaggtttttgtttttgtcttgc  1053800   ------->GAMYB ------->REM1(1) -ANAC58              --------->ZAT6                    <----------DOF2 -----ANAC58    <---------ARR11(3)                   <-----------GT1                  --------->ARR11(3) -----ANAC58    --------->GLK1(2)               --------->AHL20(2)       <---------------AtSPL8 -ANAC58        <-----------ARR10             <----------DOF2<-----------RAV1(2)      --------->AHL20(1)   ttcaacacacattcacaaaatctaactctctcaaatttcataaactgactttatataacttttgcaggggatgttgttgtacaacgaatatatagtctac  1053900                       --------->ANAC55(2)                    <---------MYB52(1)                  <---------ANAC58                   xxxxxxxxxxxxxxxx>smallRNA(i)                  <---------ANAC58               --------->ANAC58          <---------ATHB12      --------->ANAC46 --------->ANAC46 <---------------AtSPL8<---------ANAC55(2)       --------->ANAC58         <----------DOF2          -- --------->ALFIN1<-------TEIL------>ZmHOX2a(2) ---------->DOF2    ------->TEIL          --------->AHL20(2)   aatgtggaacaaatcaagatgcgttatgtgatccaagtcaaattcaactacaagcactaaaacttatgtatattagcttttgaacatcaactaattatcc  1054000                                                                                    --------->ANAC58                                                                            ---------->DOF2                                                                        --------->ANAC58                                                               <---------ARR14(2)   --------->ANAC58                                                               --------->ARR14(2)--------->LBD16                                                              <---------CCA1(2) --------->RAP2.6(2) <                                                       --------->ZAT14  --------->ANAC58          <--                                                       <---------ZAT18 --------->SPL7            ----                                                       <-------TEIL    --------->ZAT18      <--------                                                   --------->ANAC58<---------------AtSPL3  --------->ANAC58          <---------AHL20(2)       --------->REM1(1)   <---------ZAT14 <---------ZAT18 --------->AtMYB61         <----------DOF2         ------>ZmHOX2a(1) --------->ANAC58<---------------AtSPL8  --------->ANAC46 -------->DOF2        <----------DOF2            <---------AtLEC2  --------------->AtSPL8  --------->ANAC58   aaaaatcagcgttttattgtatttctttcaaactccttcatctctgattttgcacggttcactcgtatattggtacgctaaaccgcaaaccatacccaat  1054100                                                                                                  ---                                                                                            ---------                                                                                          --------->GLK1(2)             <------MYB83                                                                 --------->ARR11(3)             <------MYB46(1)                                                              <---------ARR11(3)    --------->LBD16         --------->GLK1(2)                                        --------->ANAC58  <---------LBD16   <---------WOX13(1)                                               --------->ANAC46 -----------GT1    <------------CBF                                               --------->TOE1(2) -------AHL20(2)  --------->ATHB12                    <---------YAB1---------->DOF2  --------->ANAC58 ----->AHL20(2)  <---------YAB1<---------YAB1      --------->AHL20(2)             --------->TOE2(2)*TSS -MYB59  --------->MYB52(2) --------->ICU4         <---------AHL20(2)         <-----------GT1--------   tttatccggtttagttggtatgattgagaaattcttattctctgaaactcgattttattagtatttaagcgaaagagaagaaaccctacgaaaatctcaa  1054200                                                        --------->GLK1(2)                                                        --------->ARR14(2)                                                        <-----------ARR10                                                        <---------ARR11(3)          ----------->GT1                               <---------ARR14(2)                       ----        --------->RAP2.6(3)                             --------->ARR11(3)                       <---       --------->MYB52(1)           <------NtERF2  ----------->GT1                             ------ ------>YAB1                  --------->At4g35610----------->GT1                               ------ >TOE2(3)<----------ID1 ---------->DOF2        ---------->DOF2                               -------- ---->CBF--------->ANAC46--------->DAG2     <----------ARF1      --------->HSFB2a(2)        <------ZmHOX2a(1)   tcggaaactaaacggcaaaaaaaaaaaaaagcagaggcagccatgggagaaaagagaaaatctacttcgaaaaccctagctaagaacaagaagaggaaag  1054300                                                 ------>ZmHOX2a(1) ------>ZmHOX2a(1)                               ====================================HOX2a_HOX2a ----->ARR11(3)                                  <----------DOF2   ----------->TGA1 ------ARR11(3)                            <---------HSFC1(2)    <---------At4g35610 --->DAG2                                  --------->HSFC1(2)    --------->At4g35610 ----->ARR10         ------>ZmHOX2a(1)--------->YAB1      ----------->TGA1 -->DOF2 <---------MYB59             <---------ATHB12     ----------->HVH21   <------ZmHOX2a(2)   gtcctcatttgcctaattcaatcctgaagactattgccaatgagaaacgtcctttgaactctgacgaagatgacgatgagatcgattccgacgatgaaaa  1054400                                                                                                   --                                                                                                  <--                                                                                                  ---                                                                                                 <---                                                                                              -------                                  <------ZmHOX2a(1)                                          --------                            ----------->RAV1(2)                            --------->TOE1(2)<--------                        <---------ANAC58                            <------NtERF2           ---------                        --------->ALFIN1                      <---------At5g28300      --------->At4g35610                        <---------ANAC58                    ----------->HVH21          --------->ZAT2   cgtcgatttgtatgagtatgaagaaggtgtgcctgaggaagagtctaagaaaaacaatcgctatgaccgcgtcgataactacgactacgagcttcccgag  1054500 ------->GLK1(1)                   --------->LBD16 -------ARR14(2)                   ------>NtERF2                                          --------->ARR11(3) ------>ARR14(2)                  --------->ANAC58                                        --------->ARR14(2) ---ZmHOX2a(1)                    --------->ANAC46                                --------->GLK1(2) -->LBD16                         --------->ANAC58                             --------->ARR11(3) ->LBD16              <---------ZAT14     <---------ANAC46            --------->YAB1      <---------GLK1(2) -HSFB2a(2)           --------->ZAT14<---------ALFIN1                <---------ZAT6       <---------ARR14(2) >HSFB2a(2)    <----------DOF2   <---------LBD16                <----------DOF2<---------ARR11(3)   gatttcgaggttttattctttctcttcactaattctccgccactgtgtgaaattgcaagttttgaactttagtgataagaagataatctacagattttgg  1054600                                                                                      <------MYB83                                   --------->ANAC58                                   <------MYB46(1)                                   --------->ANAC58                                 <---------WOX13(1)                                   --------->ANAC46                               --------->ATHB12                                 <-----------GT1                                <---------WOX13(1)                             --------->GLK1(2)                                --------->ATHB12           <---------TOE2(3)<---------ARR14(2)                               <---------AHL20(2)           <---------TOE1(3)--------->ARR14(2)        <---------ARR14(2)    <---------WOX13(1)  --------->At4g35610       <---------GLK1(2)    ----------->GT1         <---------YAB1  <---------At4g35610   <---------LBD16  --------->YAB1                  <---------AHL20(2)      ----   ttttagctcaattagggtttttgctatcgggattcttacgctataacaaattggtgaatccaaaattgagagtttttaattgattgattggtaatgagat  1054700  Previous    Next  AGI:  At4g02390.1    Description:  APP (ARABIDOPSIS POLY(ADP-RIBOSE) POLYMERASE); NAD+ ADP-ribosyltransferase. Identical to Poly [ADP-ribose] polymerase 2 (PARP2) [Arabidopsis Thaliana] (GB:Q11207;GB:O81294); similar to poly (ADP-ribose) polymerase, putative / NAD(+) ADP-ribosyltransferase, putative / poly(ADP-ribose) synthetase, putative [Arabidopsis thaliana] (TAIR:AT2G31320.1); similar to Poly [ADP-ribose] polymerase 2-A (PARP-2-A) (ADPRT 2-A) (NAD(+) ADP-ribosyltransferase 2-A) (Poly[ADP-ribose] synthetase 2-A) (GB:Q5Z8Q9); similar to Poly [ADP-ribose] polymerase 2 (PARP-2) (ADPRT 2) (NAD(+) ADP-ribosyltransferase 2) (Poly[ADP-ribose] synthetase 2) (GB:O50017); similar to Range:  from: 1049957    to: 1054065    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g02400.1    Description:  similar to U3 ribonucleoprotein (Utp) family protein [Arabidopsis thaliana] (TAIR:AT5G08600.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40032.1); contains InterPro domain Small-subunit processome, Utp14; (InterPro:IPR006709) Range:  from: 1054199    to: 1057998    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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