Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           --------->YAB1        <---------YAB1      <---------ICU4      --------->ATHB12      --------->ATHB51      -------->ATHB1                                                            --------->REM1(1)     <---------ATHB51                                               <---------TOE2(3)     --------->AHL20(2)                                          ------>ZmHOX2a(2)     <---------AHL20(2)                                         <------ZmHOX2a(2)     --------->ICU4                 <-------TEIL               <---------ARR11(3)                  -- --------->GT1           --------->YAB1        ----------->GT1 --------->ARR11(3)      <---------AHL20(2)   atggcaaattattagaattagtccgaataataaacaaattcgtctaaaattgtagaaaattttgggatctaagaatgagactacatcatttttttttatc  1032000                                                                                     <------ZmHOX2a(2)                                                                                     ================                                                                                 ------>ZmHOX2a(2)                                                                                 ====================                                                                               --------->ARR14(2)                                                                            <---------TOE2(3)                                                                          --------->ATHB51                    ------>MYB46(1)                                      <---------ATHB51                    ------>MYB83   <------MYB46(1)                       --------->ICU4    --------->CCA1(2)               <-----------GT1     <------MYB83             --------->At4g35610<---------ARR14(2)   <     --------->REM1(1)          <---------MYB52(1)      --------->ARR14(2)<---------ICU4  --------->ARR11(3) ------->MYB46(3) <---------MYB59 --------->MYB59       <---------ARR14(2)--------->YAB1  <---------ARR11(3)   aacaactacatcattttaaaccaaacttagaattgttaggtctcaaacttctaacaccgatttgctgcaaaaacaattatggatcggatcaagatataga  1032100                                                                                   --------->ANAC58                                                                                   --------->ANAC55(1)                                                                                   --------->ANAC55(2)                                                                                   <---------ANAC55(2)                                                                                   --------->ANAC46                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                               <------MYB83                ----------->GT1     <-----------GT1                           <------MYB46(1)           --------->YAB1  <---------GLK1(1)                 ---------->DOF2                     <---------ATHB12  --------->GLK1(1)               <---------HSFB2a(2)                  ------>MYB83--------->ANAC58 < ======HOX2a_HOX2a           <---------ICU4   <---------AtMYB61        ------>MYB46(1)        ------- ======HOX2a_HOX2a     <---------ANAC58       --------->MYB59       --------->MYB46(3)        <------ ------ZmHOX2a(1)      <---------ANAC58     <---------MYB52(1)    <-----------GT1 <---------LBD16 ---   gaggatttcacatttgacttctattgcttactcattccaaaagacggtttggtctagtttttgaaatttaaccaatcttgaaaatacggaatttgtaatg  1032200                                    --------->ARR11(3)                          <---------YAB1                         --------->AHL20(1)                                                <---------AHL20(2)                         <---------AHL20(1)                                               --------->AHL20(2)                         <---------AHL20(2)                                              <---------YAB1                         --------->AHL20(2)                                             --------->AHL20(2)                        <---------ICU4                                                 <--------HAHB4 ----------DOF2         --------->YAB1         <-------TEIL                            <---------ICU4 -------->AtSPL8       <---------YAB1 ------>ZmHOX2a(2)           --------->CCA1(2)   --------->ICU4 ---------AtSPL8       --------->ICU4--------->At4g35610   --------->YAB1        ------->TEIL <------ ---->TEIL    --------->ARR14(2)    <---------ARR11(3)    <---------YAB1      <---------YAB1 --------   tactttacaaaaattgtatatgctaattataattttgtgatctcaaatattcatgtttatatgataagataagagataacatgaatgcattattatataa  1032300                                                      <---------ALFIN1                                                    <---------ALFIN1                                                 --------->ARR14(2)                                                 --------->PCF2                                                 ------->TEIL                                                 <---------TCP15(1)                                                 <---------TCP20                                                 <---------ARR14(2)                 <------MYB83                                              --------->ANAC46                      <------MYB46(1)                                              --------->ANAC55(2)              <---------AHL20(2)                                              <---------ANAC55(2)             --------->AHL20(1)                                         <---------AHL20(2)                   <---------ARR11(3)                                        <---------AHL20(2)                    <---------AHL20(1)    - ---AHL20(2)                            --------->AHL20(2)            <---------ALFIN1              - ->AHL20(2)                             --------->AHL20(1)   <---------ALFIN1----------->TBP---------   taccatagaagatagaatgtatacagtctcaaaataacaaaatttaatacggacccacatcccaaacctctcccactctatatatttggtctctataaaa  1032400             <---------DAG2             <----------DOF2       --------->TOE1(3)       --------->TOE2(3) --------->ANAC46                                                                                 --- ----->MYB83 *TSS                                                                                 --- ----->MYB46(1)         --------->YAB1          --------->TOE2(3)                                 --- -->TBP<---------MYB59<---------ARR11(3)  ----------->GT1<-----------GT1                         ----   cccactaaacctaaacttttccaaaatcataccaaaaaaacatttagtaacatcaaaatttacaaaaaacaaaaaaacatgctatctctcaaactcttcc  1032500            <---------CCA1(2)                                                                 <------ZmHOX2a(2)   --------->ZAT6                       --------->HSFB2a(2)                                  -------- ------>ANAC46                      <---------ANAC58                        ------->MYC3     <------- ------>TOE1(1)                     <---------ANAC58                        <-------MYC3 --------->ANAC46 ------>TOE2(1)                <---------ICU4                          -------->P       ------->GAMYB -->ZmHOX2a(1)<---------CCA1(2)--------->ATHB12                      --------->MYB46(3)<---------ALFIN1   tcgtaacactcttcttatctcttcaaacactcttcattgcttctcaaactcttcttccttcaaactcttcatcaaccatatgcaaaacaacacccgatcc  1032600                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                                --------->ANAC46                                                                              <---------DOF5.7(2)   -                                                                    --------->LBD16         ---------                                            --------->HSFB2a(2)    --------->ANAC58        <---------ARR14(2)                                            <---------HSFB2a(2)    --------->ANAC58        --------->ARR14(2)                                          <-------TEIL  <------NtERF2         --------->MYB52(1)    -                                        <---------SPL7  <---------At4g35610   ---------->DOF2       -          <---------ATHB12            <------NtERF2    --------->RAP2.6(2)  --------->DOF5.7(2)     - --------->GLK1(2)         <---------ARR11(3)   <---------ARR14(2) --------->ANAC46      --------->LBD16 ->ARR14(2)                --------->ARR11(3)   --------->ARR14(2)<---------LBD16       <---------ANAC46 --ARR14(2)    --------->ZAT14       ------>NtERF2 <---------RAP2.6(2)---------->DOF2  <---------LBD16   aaaattctgcaaatcagtgttcccacaaacatctcaaggcgacgttcgcgaatacggccgcttctccctccgcaaatcgctaacgcaatcgcggaaattc  1032700              --------->ARR14(2)                            <---------GLK1(1)        ----------->HVH21        --------->ZAT14            <---------At4g35610        --------->ANAC58     --------->ATHB12            --------->ZAT18       <---------MYB52(1)              --------->ANAC58   ----------->RAV1(1)           <---------ZAT18      <-------GAMYB                 <---------STY1(2)   ------->TEIL            ----------->RAV1(1)       <---------MYB46(3)             --------->STY1(2)  --------->ANAC46      --------->ANAC46           ------>NtERF2                   ------>MYB83 -------->ANAC58        --------->ANAC58           --------->LBD16           --------->DOF5.7(2) >GLK1(1)     <---------ARR14(2) <---------ZAT14  --------->ANAC46           <---------MYB52(1) -------->ANAC46  --------->TOE1(3)            --------->ARR14(2)           <-------GAMYB -------->ANAC55(1)     --------->ANAC58       <---------ARR14(2)           <---------RAP2.6(3)------ -------->ANAC58  --------->TOE2(3)        --------->TOE2(3)--------->At4g35610    ------>MYB46(1)---   acacgcaccattgacagatacctcaaacgcaacaatgcactattatctcaatccgccgttggagctctccaagactgccgttacctagcaagcctcacaa  1032800                                                                                                  <--                                                                                                 ----                                                                                                <----                                  <-----------GT1                           --------->GLK1(1)  <-----                                  --------->ZAT6                         --------->ANAC58      <-----                           --------->WRKY18(1)                           --------->ANAC58      ------                          --------->At5g28300                           <------NtERF2          ------                    <---------HSFB2a(2)                                ------>NtERF2          -------       --------->YAB1    ----------->GT1                             --------->DEAR3(2)      <------- ----->RAV1(1)      --------->HSFB2a(2)--------->REM1(1)         ---------->DOF2    <---------ALFIN1< ---->GAMYB     <---------SPL7  <---------ARR11(3)      ---------->ID1--------->DEAR3(1)--------->ZAT14   cagactatctcataacatcgttcgagacggtcaatatcactacatcatccaaaacgttgtcgttttccaaagccgacgaaatccaaacacttctctccgc  1032900  Previous    Next  AGI:  At4g02330.1    Description:  ATPMEPCRB; pectinesterase. similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT1G02810.1); similar to pectinesterase family protein [Arabidopsis thaliana] (TAIR:AT2G47550.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40042.1); similar to papillar cell-specific pectin methylesterase-like protein [Brassica napus] (GB:AAK84428.1); contains InterPro domain Pectin lyase fold (InterPro:IPR012334); contains InterPro domain Pectinesterase, catalytic; (InterPro:IPR000070); contains InterPro domain Pectin lyase fold/virulence factor (InterPro:IPR011050); contains InterPro domain Pectinesterase inhibitor; (InterPro:I Range:  from: 1032413    to: 1035037    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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