Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->MYB52(1)                                                                               --------->ANAC58                                                                             ---------->DOF2                                                                          <------NtERF2                          ----------->GT1                                ------>NtERF2  --------->ARR14(2)                     <---------HSFB2a(2)       --------->AHL20(2)        <---------DEAR3(2)                  <---------ARR14(2)  --------->LBD16                   <---------DEAR3(1)      <---------GLK1(2) ---------->DOF2--------->LBD16                 <------NtERF2    --------->GLK1(2) --------ATHB12   --------->ARR14(2) --------->HSFB2a(2)               --------->ATERF1(1) -->MYB83         --------->GLK1(2)  <---------LBD16                 --------->ETT(2)   ------->TEIL -->MYB46(1)     <---------GLK1(2)   <---------HSFB2a(2)          <-----------RAV1(1)   <---------ARR14(2) ----MYB59     ------->GAMYB        <---------LBD16            <----------DOF2 --------->ANAC58 -----   aatcaattgattctcaacagaatctcgaaagtaaaatttcccggagaaaataaacaaaatcggagcttttgtcgtcggcaaaagcaaacgaatctgaatc  972300                    <-------MYC3                    ------->MYC3                    <-------MYC2                                              <------------CBF     <-                    ------->MYC2                                            --------->AHL20(1)     <-                   <---------ANAC58                                         --------->ARR11(3)     <-                   <---------ANAC46                                      --------->AHL20(2) <--------                   <---------ANAC58                                      <---------AHL20(2) ---------                 <---------ANAC58                          <----------DOF2  <---------AHL20(1)     --          <---------YAB1                                 <-----------------AGL1             <--------       *TSS      <---------ANAC46          <------ZmHOX2a(1)           <-----------TBP      --------- ------>GT1      <---------ANAC58     <---------MYB52(2) ----------------->AGL1      <----------DOF2-   gcaaaatcgtttctcattagcgcgtgttacagacttagcaacgaaggagaagtatttgggcctttttaggcccatttatatattgggcttatagtccact  972400                                                                                 --------->At4g35610                                                                                 <---------At4g35610                                                                                ------>NtERF2                                                                                <<<<<<<<<AtERF-4                                                                                <<<<<<<<<AtERF-3                                                                                <---------RAP2.3(1)                                                                                <<<<<<<<<AtERF-1                                                                                <<<<<<<<<AtERF-5                                                                                <<<<<<<<<AtERF-2                                                                                <---------ERF1                                                                               <---------RAP2.6(2)                                                                               --------->ATERF1(2)                                                                               <---------RAP2.3(2)                                                                               <---------DEAR3(1)                                                                               <---------RAP2.3(3)                                                                               <---------ANAC46                                                                               <---------ATERF1(2)                                                                              <------NtERF2                                                   ---------->DOF2        <---------ANAC58                                                  <------NtERF2           <---------ANAC58 --------ANAC58                                 <---------ANAC46         <-------TEIL --------ANAC58                  <-------MYC3  <-----------------------TaNAC69(2)<------NtERF2 --------ANAC46                  ------->MYC3  <------NtERF2           <---------GLK1(2)      ------- -ZAT14                    --------->At4g35610 --------->RAP2.3(1)     --------->ARR11(1)   <-------- >ZAT14                    <---------ZAT18    <---------ATERF1(1)      <---------ARR14(2)   --------- --------------->AGL1      <---------At4g35610------>NtERF2            --------->ARR14(2)  ---------- -ZAT18              <---------ANAC46        <---------DEAR3(1)      ----------->ARR10    <---------WRKY38(1) >ZAT18----------->GT1 --------->ALFIN1      --------->ALFIN1      --------->LBD16   ---------->DOF2 -------->LBD16      --------->ALFIN1     <---------DEAR3(1)---------->DOF2   --------->RAP2.6(3)   tgcgcgatagggtcaatataagtgtgtggagcacacgttttaagacggtggcgcaaagacgaaaatgcccgtagattcgtggcggctaaaagtcaacaga  972500                --------->At5g28300                                                       --------->GLK1(1)     --------->MYB52(2)                             <------MYB83                          <---------GLK1(1)     <------MYB83  ---------->DOF2        <---------ANAC46                          <---------AtLEC2     <---------MYB46(3)                <---------MYB52(1)                     <---------ANAC46     <------MYB46(1)                   <--------P   <------MYB46(1)           <---------ANAC58    <---------AtMYB61                 <-----------HVH21--------->ATHB12       <---------ANAC58    ---    <---------DEAR3(1)             ----------------->AGL1                    <-------TEIL<---------ARR14(2) >GAMYB <---------MYB46(3)  <---------ZAT14    --------->MYB111(1)         --------->ARR11(1)     <-- -At4g35610   --------->LBD16      <-----------------AGL1                  <---------GLK1(2)      <-- >At4g35610  <---------ANAC46 --------->YAB1  <--------P          --------->At4g35610    --------->ARR14(2) ->RAV1(1)  <-----------RAV1(2) ----------->HVH21  --------->MYB59<---------At4g35610    <---------GLK1(2)   gggacgttggtggttcagggtaaaagaggctatagtgaccggttaggggtagtttggtcattggatttagctcaatagattcgtgtccatggattccctc  972600                                             --------->ALFIN1                                           <---------ANAC58                                    <----------DOF2                                    <---------DAG2                                                 --   <------NtERF2                   <---------DAG2         <----------DOF2                   <--------  ------>NtERF2               <---------ANAC58          <---------TOE1(2)                   <-------- <---------ETT(2)             <---------ANAC58      ------>ZmHOX2a(1)                      <---------ATHB12 --------->ETT(2)           --------->ARR11(3)  <---------ARR14(2)                 <---------At4g35610 ------>O2              ---------->DOF2    <---------ANAC46                        --------->At4g35610 ---------RAV1(1)      <---------AHL20(2)  <---------ANAC58                   ----------->HVH21   <-- -------O2 ---------->DOF2  <---------ARR11(3)  --------->ARR14(2)     ---------->DOF2     --------->AHL20(2)   atgtcgccagagaaaaagaccacatttaaaggtcttgcctttttggtgtgtttcctcgcactttcaggctgaacaaagtactgacagatgctaataaata  972700                        -------->HAHB4                        --------->YAB1                        -------->ATHB1                        --------->ATHB51                        <---------ICU4                        <--------HAHB4                        <---------AHL20(2)                       --------->ICU4                         --------->YAB1                       <---------ATHB51                    >>>>>>>>>GATA-2                       <---------YAB1                      <---------ARR14(2)         ---------->TaMYB80                                >>>>>>>>>GATA-3                      <----         <---------KAN4(2)<---------YAB1                   >>>>>>>>>GATA-4                   <-------         <---------ARR14(2)                         <---------ANAC46                 <---------MYB46(3)         --------->ARR14(2)                         <---------ANAC58                 <-----------RAV1(1)    <------ZmHOX2a(1)--------->YAB1                 <---------ANAC58              <---------ARR14(2) ------->ANAC46     --------->AHL20(2)             <-------TEIL     --------->YAB1--------->ARR11(3) -ICU4 *TSS         <---------AHL20(2) <-----------GT1     --------->ARR14(2)     --------->ARR14(2) -AHL20(2) --------->KAN4(2)       --------->ARR11(3)      >>>>>>>>>GATA-1        <---------ARR11(3) -------LBD16     <----------DOF2  <---------ARR11(3) <---------ANAC46          ----------->ARR10   cacggaggaagaatatgctcctttaattattatctgagatttttcaattcaagttcgtgtggattcagaatcaaaatggaagaagatttgttgggcattt  972800                                                                              <-----------GT1                                                                    <-------TEIL                                                                   <------ZmHOX2a(2)                                                                  <---------ARR11(3)                                                                  --------->ARR11(3)                                                                  <---------ARR14(2)                                          --------->ANAC58        --------->ARR14(2)                                          --------->ANAC58    ---------->DOF2 ---------->ID1 -------RAV1(1)                  --------->ARR11(3)        <---------ZAT6 <----------DOF2 ---DOF2                         <---------ARR11(3)    <--------P --------->AGP1               <-----   gtgggtttgattcgtcgaagaaatatcgattagaagaacttgccaagtatcagtcgggttagtgtaaagatccattctttttcccaattgcatttagctt  972900                           ----------->GT1                           <---------MYB46(3)                         <-------PIF5                         <---------MYB52(1)                        <---------ZAT2                                                          <----              <----------DOF2   <---------AHL20(2)                     --------->ARR11(3)       <----    <---------TOE1(3)   <---------At4g35610                          <---------TOE1(3)       <-------    <---------TOE2(3) <-----------RAV1(2)                     ---------->ID1                --------- -----DOF2 <---------YAB1------->PIF5  <----------DOF2   <----------DOF2           --------->AHL20(2)   tgttttagggtttatgctttatatgcaggtggttttaatttctttatcaaatttcaattcttttggcccttaaggtctagtgagtttaaattttgtcact  973000                    <---------AHL20(2) ------DOF2       --------->ANAC55(2)                         <-------TEIL -----DAG2        <---------ANAC55(2)     ----------->GT1 <---------TOE1(3)                       <-- ----GT1 <---------DAG2<---------WOX13(1)<---------AtMYB61<---------TOE2(3)          <---------YAB1 ->ID1   <----------DOF2     ---------->DOF2              --------->MYB59            --------->ICU4   ttatgggtaaactttatgttatgtaattgataaaagttttgtgatggtgaaatttttgtttaggttcatgtattgagtttgaagatgatgatgaaatggc  973100                                 <---------YAB1                               <---------ICU4                               --------->YAB1                              --------->ICU4                              <---------YAB1                                         ------>NtERF2                           <---------YAB1                                         ------>NtERF2                <---------MYB52(1)--------->ATHB12                               --------->ANAC58      <---------YAB1     <---------At4g35610                                     --------->ANAC58     <-----------GT1     --------->At4g35610                                     --------->ANAC46 -------At4g35610      <-----------RAV1(2)          <-----------GT1<------ZmHOX2a(1) ----------->RAV1(1)   agtggattatccatgcccgttttgctcagatgattatgatttagttgaattgtgtcaccatatcgatgaggagcatcaactagacgccaacaatggggta  973200  Previous    Next  AGI:  At4g02195.1    Description:  SYP42 (SYNTAXIN OF PLANTS 41); SNAP receptor. Identical to Syntaxin-42 (SYP42) [Arabidopsis Thaliana] (GB:Q9SWH4;GB:O04258;GB:Q9SBD4); similar to SYP41 (SYNTAXIN OF PLANTS 41), SNAP receptor [Arabidopsis thaliana] (TAIR:AT5G26980.1); similar to SYP41 (SYNTAXIN OF PLANTS 41), SNAP receptor [Arabidopsis thaliana] (TAIR:AT5G26980.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40067.1); contains InterPro domain Target SNARE coiled-coil region (InterPro:IPR000727); contains InterPro domain Syntaxin, N-terminal; (InterPro:IPR006011); contains InterPro domain Syntaxin/epimorphin, conserved site; (InterPro:IPR006012); contains InterP Range:  from: 970007    to: 972307    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g02200.1    Description:  drought-responsive family protein. Identical to Protein DEHYDRATION-INDUCED 19 homolog 5 (DI19-5) [Arabidopsis Thaliana] (GB:O04259;GB:Q7G0Q3); similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G02750.1); similar to fiber protein Fb2 [Gossypium barbadense] (GB:AAN77145.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Drought induced 19 (InterPro:IPR008598) Range:  from: 972707    to: 974692    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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