Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <---------AHL20(2)       --------->ICU4       <---------YAB1                                               ----------->GT1     <---------ICU4                                            --------->CCA1(2)    <---------ATHB51                                          <---------AHL20(2)             --------    --------->AHL20(2)                                        <---------AHL20(1)            <--------    <---------AHL20(2)                                        --------->AHL20(1)           --------->AHL20(2)    --------->ICU4                                         --------->AHL20(2)          <---------YAB1 <---------AHL20(2)                                  <---------ARR14(2)                <---------AHL20(2) --------->AHL20(2)                                  <---------ARR11(1)                --------->AHL20(2) -------->AHL20(2)                  <---------AHL20(2)     --------->YAB1          --------->AHL20(2) --->TOE2(3)   --------->AHL20(2)  --------->AHL20(2)--------->GLK1(2)             <---------AHL20(2) ----GT1   <---------ZAT6--------->AHL20(2)         <---------CCA1(2)       ----------->GT1<---------AHL20(2)   taataaataattagtgtttaattcaaattatatcaaattttatgggaattttgcaaatctataatatatgaggtcaaattgtaaattatataattaaaag  959600                                         <---------YAB1                                        <---------AHL20(1)                                        <---------AHL20(2)                                      <---------AHL20(2)                                      <---------YAB1                  <---------AHL20(2)           ----------->GT1          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         ---------->DOF2 --------->ARR11(3)                 ------>ZmHOX2a(1)    --------->CCA1(2)    <---------------AGL15<---------ARR11(3)                <---------MYB59      <---------ARR11(3)    --------------->AGL15--------->AHL20(1)            <---------GLK1(1) <---------TOE2(3) -->DOF2<---------AHL20(2)      <---------TOE2(3)      --------->GLK1(1)---------->DOF2 -AHL20(2)--------->DAG2 <---------AHL20(1)<---------AHL20(2)  --------->ZAT6   --------->ARR11(3)   gtattagtatataaagtaaaaatagaatatttttaagaatattattttttagagtagaaatcctaactctattttaaagtaagatataaaactatacatt  959700                                                          <---------AHL20(2)                                                          --------->AHL20(2)                                                         <---------AHL20(2)                                                         --------->AHL20(2)                          --------->MYB46(3)             --------->YAB1                 ------->TEIL                         <---------ICU4             <-------TEIL>>>>>>>>>>MYB80             --------->AHL20(2)            --------->ARR14(1)  ------>ZmHOX2a(1)    <---------AHL20(2)            --------->CCA1(2)  --------->TOE2(3)     <---------ATHB51           --------->ARR14(2)------>MYB83            --------->ICU4                 ----------->TBP           <---------ARR14(2)------>MYB46(1)     --------->AHL20(2)         --------->ANAC46           --------->ARR11(1)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <-------TEIL --------->ARR11(3)     --------->ANAC46         <---------AHL20(2)  --------->ANAC46--------->YAB1 <---------ARR11(3) <-----------GT1           ----------->GT1        <---------TOE1(2)          -----   tgagatgttcttagatacgaatttacaaaccatcctaaatatcaaaactagttaaataattaaaattttccaaggtacatgtcactataaaaacagccaa  959800                                                  --------->GLK1(2)                            ------                                        <--------HAHB4                    --------->YAB1<------MYB46(1)                                        --------->ATHB12                 <-------TEIL   <------MYB83<                        <---------MYB52(2)       --------->GLK1(1) --------->ARR14(2)  <---------MYB46(3)                 --------->ZAT14        --------->YAB1             <---------ARR14(2) <---------MYB55(1) <----------DOF2 <---------ZAT14       <---------YAB1       ---------->DOF2    ---------->DOF2------- ----->DOF2     <---------ZAT6     ----------->GT1<---------ARR14(2) <-------TEIL     <---------MYB52(1)   aagcttttctacatgctagtgtagaaactgacccaagaggtatcattaggggaatccaaattcaaaggggatacattcatcaaaagcagttggtgagcct  959900                                                 ------>ZmHOX2a(2)                                                --------->CCA1(2)                                               <---------ARR11(3)                                               --------->AGP1                                               --------->ARR11(3)             <---------ATHB12          --------->YAB1                    --------->YAB1                  --------->MYB52(1) --->DEAR3(1)                          ------------>CBF                   --------->MYB46(3) ---------MYB52(1)      <----------DOF2<-------TEIL                      -------->P      --------->ZAT14 -->ATERF1(1)--------->ATHB12    ---------->DOF2<------ZmHOX2a(2)       --------->WOX13(1) <---------ZAT18   ccgttttttctagcatcatcggtcttctttgcgataaaagatgcaatgagatctagagccgagatgggtcttatcaaccaatggtttccactggacactc  960000                        <---------ANAC58                        <---------ANAC58                        <---------ANAC46                   <------ZmHOX2a(1)                <-----------RAV1(2)                --------->YAB1              --------->ARR14(2)                                            --------->ZAT2              <---------ARR14(2)                 <----------DOF2            <---------ZAT2     <-----           <---------ANAC58             <-----------GT1                  <---------ALFIN1  <---------           <---------ANAC58            <---------ZAT14          <---------GLK1(1) <---------ZAT6  <--   ttgcaactccagagcgtatcaggatggcttgtttcgacgagtttacttctccttttgtaagtttagatttctgccccaagcttagtgtttgagcttttaa  960100         --------->ANAC58         --------->ANAC58     --------->ANAC46    <---------LBD16                  --------->ZAT18 ------GT1                    --------->At4g35610                                              <----- -DOF2--------->LBD16  --------->ANAC46           --------->YAB1               --------->AHL20(2) --------DOF2         --------------->AGL15   ----------->GT1  --------->GLK1(2)   <---------ICU4   ctttcatccgcagggaaaatgttacccaaaacagatgagtatgctatttggataataatctacaaattctattccatcgaattaaaaattccaaaatata  960200                                                    ------>ZmHOX2a(2)                                                   <------ZmHOX2a(2)                           --------->YAB1         --------->ARR14(2)                       --------->AHL20(2)         <---------ARR11(3)                       <---------AHL20(2)         <---------ARR14(2)                    <------ZmHOX2a(1)             <---------AGP1            <---------ANAC58                      --------->ARR11(3)     <---------DOF5.7(2)            <---------ANAC46                   ------>ZmHOX2a(1)       --------->DOF5.7(2)            <---------ANAC58            <-----------GT1     <---------MYB59                    ------  <----------DOF2  --------->ICU4  --------->YAB1 --------->AGP1     <---------ZAT6           <------ ------GT1  <---------AtLEC2      <---------YAB1 <---------CCA1(2)  <---------YAB1        <----------   ctctctttttttttgcatgtaaggattaattatactatcattttacatcctagatctagtgacttaacttattgttaacgagtagttttctgatattaaa  960300                                                  <---------AHL20(2)                                                  <---------YAB1                                               <----------DOF2                <---------AHL20(2)       <---------MYB52(1)                --------->YAB1                --------->AHL20(2)      --------->At4g35610             --------->YAB1                --------->ATHB51        <---------At4g35610       --------->At4g35610        --------->At4g35610             <-------GAMYB             <---------At4g35610        <---------At4g35610             >>>>>>>>>TAC1    <---------HSFB2a(2)      <-----------GT1  <---------ANAC46                  ------------>AtMYB77 --------->HSFB2a(2)     --------->AHL20(2) ---->DOF2      --------->ATHB12    ------>NtERF2 --------->AHL20(2)    <---------ICU4 ---AHL20(2)   <---------AHL20(2)  ----------->HVH21 <---------WOX13(1)--------->ICU4              <- -----AGL15    --------->ICU4 --------->MYB52(1) --------->AHL20(2)    <---------ATHB12           ---   agtaacttggagatgaaattatttgggcgagggaacggggacagttggccttttaattgctcgaagacagctaataatcaaaattaactatttcttacaa  960400                                                                                     --------->YAB1                                                                               <-----------GT1                                                                              <---------YAB1                                                                            --------->YAB1        ----------->GT1                                                     <---------ICU4     <---------MYB52(1)                                                    <---------YAB1   --------->MYB52(2)                                                   <---------AHL20(2)  <-------TEIL              ----------->GT1              ---------->DOF2--------->AHL20(2) --------->YAB1 --------MYB46(3)       --------->ATHB12     --------->YAB1            --------->AHL20(2) <---------YAB1 ------>ALFIN1         <---------YAB1       <---------YAB1     ----------->HVH21    <---------YAB1   gtggttcgtttagtaaaatactaatatgattagttatattgtcactatcatacaaaactaaaagtctgacatatttaattataactatcattttcataag  960500  Previous    Next  AGI:  At4g02180.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01910.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01760.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G01930.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146) Range:  from: 959964    to: 963517    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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