Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->ARR11(3)              --------->ARR11(3)                 --------->GLK1(2)             --------->ANAC58       --------->AHL20(2)                      --------->ANAC58<<<<<<<ZML2 --------------->AGL15      <---------ATHB12                 <---------HSFC1(2)   <---------HSFB2a(2)         <-------TEIL    --------->WOX13(1)           ---------->DOF2 <---------ARR11(3)       ------>ZmHOX2a(2) ---TOE1(2)      <---------ARR11(3)    --------->HSFC1(2)   --------->HSFB2a(2)  --------->YAB1   tttttgcaatcaaatacaaaatctatgaccaaaaacaaagaaacatcgcaagaacttcaaatctagaacaaatcgatctccaattagaaattcatatgaa  953300                                              ---------->DOF2                                      --            <---------WOX13(1)                --------->MYB52(1)     ---------->DOF2             ----       <------ZmHOX2a(2)            ----------->GT1      --------->YAB1                   --------->At4g35610      <---------ARR11(3)           --------->YAB1        ----------->GT1                  <---------At4g35610      --------->ARR11(3)      --------->AHL20(2)--------->DAG2   ---------->DOF2         --------->MYB52(2)   acagagacgatctaattgatcaaatcggaacataaaatcagaaaaaactaaaggtggaatcgtaaacaaaagaaagaatcacatacttggttcgctgaag  953400          <---------ANAC58          <---------ANAC46          <---------ANAC58     ------>ZmHOX2a(1)   ------>ZmHOX2a(2)  <------ZmHOX2a(2)  --------->GLK1(2) --------->ARR14(2)                                                                                 - <---------ARR11(3)                                                       ------>ZmHOX2a(1)       --- <---------GLK1(2)                            <---------ANAC55(2)         ===========================HOX2a_HOX2a <---------ARR14(3)    --------->At4g35610    --------->ANAC58         <-----------GT1            --- <---------ARR14(2)    <---------At4g35610    --------->ANAC58        <-----------GT1         ------>ZmHOX2a(2) --------->ARR11(3)  <---------MYB52(1)       ----------->GT1      --------->ARR14(2)         ======= --------->ARR14(3) <-------GAMYB --------->ANAC58            --------->HSFB2a(2)           <-------- --------->ARR10---------->ID1    --------->ANAC58            <---------HSFB2a(2)         <XXXXXXXXXX ------>DOF2<---------MYB52(1)  ---------->DOF2   <---------CCA1(2)<---------ARR14(2)     ------>ZmHOX2a(1)   aaagatcctgttccgtttgtcccgttgctgagccaaaagccatagaagacgtaaatctcttcttctgcaaattttcctctctcttgttcttcctgatctc  953500                           --------------------->WRI1                       ------>NtERF2                       --------->ORA47(1)                       <---------RAP2.6(3)                      --------->RAP2.6(2)                      --------->RAP2.3(2)                      --------->DEAR3(1)                     --------->RAP2.3(1)                             <---------ALFIN1                     --------->ORA47(2)                              --------->DEAR3(1)                     --------->ATERF1(1)                            <---------ZAT2                    ------>NtERF2--------->ANAC46                   --------->ZAT2                    --------->LBD16                          <---------ANAC58                   --------->ANAC46                          <---------ANAC58                   --------->DEAR3(1)                     <---------ARR14(2)                  --------->ATERF1(1) --------->MYB46(3)  --------->ARR14(2) ------>GAMYB    ------>NtERF2  <---------LBD16           --------->GLK1(2) ------>ANAC58   <---------ATERF1(1)  --------->DEAR3(1) <---------GLK1(2) ------>ANAC58  --------->DEAR3(1)--------->LBD16   <-----------GT1------->TEIL       <---------AGP1 ================HOX2a_HOX2a   ------>ZmHOX2a(1)<----------DOF2   <---------ALFIN1   <------MYB46(1) -ARR11(3)------>ZmHOX2a(1)------>ZmHOX2a(1)<---------MYB52(1)<-----------HVH21      <------MYB83 XXXXXXXXXXMIR168A/B<---------ATERF1(1)    <---------At4g35610--------->LBD16   --------->ANAC46   --   aaccaagttatcctctcgcctccgccgtccttcctccgcatcgaccgctactttgtaccgattccgtcgcacctccgtcttcgcgctaggtctgagagac  953600                                                --------->AHL20(2)                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                      --------->MYB52(1)  --------->ANAC55(1)                                     ------->GAMYB        --------->ANAC58   ------>NtERF2                    --------->MYB46(3)    --------->ANAC46   <---------At4g35610             <---------TOE2(3)      --------->ANAC58   --------->At4g35610            --------->MYB52(1)<---------AHL20(2)  --------->DEAR3(1)              <---------DOF5.7(2) <-----------GT1                     *TSS --------->RAP2.3(1)              <-----------GT1   --------->AHL20(2)            <---------ZAT6 ------->DEAR3(1)             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                ----------->GT1   atcgccgctaaaatcgaatcgaaatcggaagagaattaacgatcggaagattatttaaacacgccaagttcgattaatgagagagtgataagggttttgg  953700                                        --------->ATERF1(1)                                       --------->ANAC58                                       --------->ANAC58                                       <---------ATERF1(1)                                          <                               ------->TEIL                                                       ---                             --------->ZAT18                                                      <--                             <---------ZAT18                                                   ------                          <---------ANAC58                                                   <-------                <---------AHL20(2)   <------ZmHOX2a(1)                                      ---------              <-----------TBP<---------ZAT14        <------ZmHOX2a(1)                      <--------HAHB4      <---------ANAC58    <---------ANAC58         <---------At4g35610   <------------CBF  --------->YAB1      <---------ANAC58    <---------ANAC46       <-----------RAV1(2)------------>CBF      <---------YAB1   agtttgatgcgagtgtatttatacaagagcgtgtacttaggaggccacgattcaggagacttgttgttaatccaatattgcccctaagttttatcattaa  953800                                                                                            <--------                                                                                          <---------ICU4       ------>MYB83                                                                       -------->HAHB4      --------->ANAC46                                                                   --------->ICU4     --------->TOE1(2)                                                                   <---------ATHB51    --------->HSFC1(2)                                           <---------TOE2(3)     <---------ICU4    ----------->RAV1(2)                                    <---------DAG2             ---------------    <---------HSFC1(2)                                     --------------->AGL15      <--------------    --------->HSFB2a(1)                                    <---------------AGL15      --------->ICU4    <---------HSFB2a(1)                                   ----------------->AGL1     <---------------   ------->TEIL                                           <-----------------AGL2     <--------------- ------->GAMYB                                            <-----------------AG --------->DREB2C(2) ---------MYB52(2)        <----------DOF2                 <-----------------AGL1     ================ ------>MYB52(1)        ---------->ID1     --------->TOE2(3)     --------->MYB59 ------>MYB83 ---------GT1      <---------AHL20(2)      --------->YAB1 <-----------------AGL3 ------>MYB46(1) --->YAB1    --------->YAB1                --------->TOE1(3)<----------DOF2    --------->DEAR3(1) --YAB1------>MYB46(1) <-----------GT1   ------->TEIL     =========================================== >TOE2(3)   <---------ATHB12            <---------CCA1(2)------>NtERF2        --------->DEAR3(2)   taacgaacctgccactcatattttttttcttttttgaaatttgaatcttaacgtctctctgcctttttaggtatgtatacaccgactactaattatggat  953900                                                                                           --------->ATHB51                   --------->ANAC46                                                        <---------ICU4                   --------->ANAC58                                                       --------->AHL20(2)                   --------->ANAC58            --------->RAP2.6(2)                        <---------AHL20(2)      <----------DOF2   <---------ARR14(2)   --------->ZAT2                               --------->ICU4     --------->TOE2(3)  --------->ARR14(2)   --------->At4g35610                          <---------ATHB51 -TOE2(3)          --------->AtLEC2          <---------At4g35610                       <---------AHL20(1) >AGL15          <---------ALFIN1           ----------->RAV1(1)                        --------->AHL20(1) -AGL15         <---------REM1(2)         <---------At4g35610                          --------->AHL20(2) --AGL3       <-----------GT1             --------->At4g35610                          <---------AHL20(2) --AGL2<---------MYB52(1)          <----------DOF2     <---------------AGL15---------->DOF2-------->ATHB1 ======================================================================MADS_MADS      <---------AHL20(2) =MADS_MADS <-----------GT1   <----------DOF2<---------ZAT2            <----------DOF2--------->AHL20(2)   ttgttttcctttattttctccacgcaaatattcttttctttttctgcagcagcaatactctaatttgaagaggctttttaaagcccaaataaattattac  954000                                                               --------->ARR11(3)                                                 ---------->DOF2<------ZmHOX2a(2)                                                <---------AHL20(2)                                               --------->AHL20(2)                             <------                                     <---------ZAT14           <---------ARR11(3)          <---------ARR11(3)                                     --------->ZAT14   --------->At5g28300                 --------->ARR11(3)                                   --------------->AtSPL8  ---------->DOF2              --------->YAB1                            <-----------GT1    <---------AHL20(2)                      <---------YAB1                     ----------->GT1 <---------ZAT18  ----------->GT1               --------->ICU4                   --------->MYB52(1)--------->ZAT18 ----------->GT1        --------->At4g35610     <   ataggccaaacttggctaaaacaacgtaatttacaagactgtactctaattaaaaggggtaaaaagatcaatgtgagcaactgagcattatgagaacttt  954100                                                                                                   <x                                                                                                   xx                                                      <---------ANAC46                          xxxxx                                                      <---------ANAC58                         <-----                                                      <---------ANAC58                         xxxxxx                                               --------->TOE2(3)                             xxxxxxxx            <-----------GT1                  -------->P    <---------GLK1(1)                 xxxxxxxx ----DOF2 <----------DOF2------->TEIL      --------->MYB46(3)                               <xxxxxxxx ---------ICU4<---------YAB1    ---------->DOF2--------->YAB1   <----------DOF2          --------->ATHB12   actaattagatgctttactattcaatgcatcttggaaagacgagaacaaccatattgcttgaattcctttcaaatgagagaacaactaaattgatttctt  954200  Previous    Next  AGI:  At4g02150.1    Description:  ATIMPALPHA3/MOS6 (IMPORTIN ALPHA 3); protein transporter. Identical to Importin subunit alpha-2 (KAP2) [Arabidopsis Thaliana] (GB:O04294;GB:O04255;GB:Q94F55); similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.1); similar to importin alpha-2 subunit, putative [Arabidopsis thaliana] (TAIR:AT1G02690.2); similar to AT-IMP (Arabidopsis thaliana importin alpha), protein transporter [Arabidopsis thaliana] (TAIR:AT3G06720.2); similar to unknown [Populus trichocarpa] (GB:ABK93106.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44871.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75951.1); Range:  from: 950611    to: 953690    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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