Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                               --------->ATHB12                                            <---------YAB1                                          --------->YAB1                                         <---------YAB1                                       <---------ICU4                                       <--------HAHB4                                       --------->ATHB51                                       <---------AHL20(2)                                       --------->YAB1                                       -------->ATHB1                 <-----------GT1       -------->HAHB4              --------->YAB1          <---------ATHB51             <---------YAB1           --------->ICU4                                             <---            --------->AHL20(2)        <---------YAB1                                    <---------AHL20(2)            <---------AHL20(1)     --------->AHL20(2)                 --------->YAB1    --------->AHL20(2)           --------->YAB1          <---------AHL20(2)               --------->ANAC58   --------->AHL20(2)     ----------->GT1 ---------->DOF2--------->YAB1                  --------->ANAC58   <---------AHL20(2) --------DOF2<---------AHL20(2)  --------->TOE2(3)                  --------->ANAC46   <---------AHL20(1) -------DOF2--------->AHL20(1) <---------AHL20(2)          ----------->GT1             --------->AHL20(1)   ctttgggagataaatataataaccaaagagtatttcattaattattatgatttcgaaaccgaagtaaaacaagcatcacattgtcttaatttatttgtgc  940400                                                                                            ---------                                                            <---------AHL20(2)     --------->YAB1                              ----------->ARR10          ------->TEIL              ----------->GT1                  <-----------------AG                <---------ANAC55(2)    --------->ANAC55(2)                  ---------->DOF2--------->CCA1(2)    <---------ANAC46       <---------ANAC55(2)             --------------->AGL15               --------->ZAT6              --------->ANAC58 -------DOF2 <---------------AGL15           --------->AHL20(2)              --------->ANAC58       <   tatttgtgagaatttctcttaaaagttttggtaagatttgagtagaatttaaaactacgtatataatcgttttcgaatcaagtaattgtaaatatagtta  940500                                               <---------WOX13(1)                                             <---------ICU4                                      ----                                             --------->ATHB12                                   <----                                            <---------AHL20(2)                                  -----                                            --------->AHL20(2)                                 ------            --------->YAB1          <---------ATHB12          <---------TOE2(3)              <-------     --------->ICU4                 --------->ICU4<---------ANAC46                          ---------    <---------WOX13(1)     ----------->GT1--------->TOE2(3)   <---------TOE1(3)      <---------AHL20(2)  <------ZmHOX2a(1)    <---------ICU4<---------ICU4<----------DOF2              --------->AHL20(1) <---------YAB1    <-----------GT1--------->YAB1  <---------ANAC58              <---------AHL20(1) -->GT1    <---------YAB1 --------->YAB1 --------->YAB1   <----------DOF2       <---------ARR11(3) ---------TOE2(3) --------->AHL20(2)<---------YAB1<---------ANAC58--------->ALFIN1   --------->AHL20(2)   tttaggattgattatcaaaatttactaattagaaaataatcattcattaattgctttgagttttaagggtgtgtttatgcaatatttttaaatactaatt  940600                                                             <---------ANAC58                                                             <---------ANAC58                                                            --------->ATHB12                                                          <---------WOX13(1)                                                          <--------P                   <------------CBF                                                        <------MYB83                 --------->AHL20(2)                          <---------TOE2(3)             <------MYB46(1)             <---------AHL20(2)                        <---------AHL20(2)              <---------MYB46(3)          --------->AHL20(2)                       --------->AHL20(2)             <---------WOX13(1)--------->AHL20(1) ----->YAB1          <---------ARR11(3)             --------->ATHB12    <---------AHL20(1) -----AHL20(2)       --------->ARR11(3)             <--------ATHB1      <---------ARR11(3) ---->AHL20(2)     --------->ICU4                  --------->ICU4       --------->ARR11(3) --->AHL20(2)    ---------->DOF2                   <---------YAB1      <---------CCA1(2) --ICU4  --------->ARR11(3)     --------->ICU4   --------->YAB1     ------>ZmHOX2a(1)<---------AHL20(2) >ICU4   <---------ARR11(3)----------->GT1 <---------HSFB2a(2)<---------WOX13(1)<---------AHL20(2)   aataacatcgagattttagtaaagatttaatgtaatatttgaattttggaagaatgattggttgattgtcctaatatcttatttgattaaattgtatgtt  940700                              --------->At4g35610                              <---------At4g35610                            <---------PCF2                         --------->ALFIN1                        <-------PIF5                        ------->MYC2                        <-------MYC2                        ------->PIF5                        <-------MYC3                        --------->ANAC46                        --------->TOE1(2)                  --------->LBD16                        ------->MYC4                       ------>ZmHOX2a(1)                        <-------MYC4                       <---------LBD16                        ------->MYC3                      --------->TOE1(2)                       --------->O2                 <---------WOX13(1)                       --------->TGA1a             <------------CBF                           -------                       <---------TGA1a           <---------YAB1                        --------->LBD16       <------------CBF<<<<<<<<<<HY5             <---------AHL20(2)                   --------->HSFB2a(2)   <---------TOE2(3)   <---------O2    <---------ZAT6    ------>ZmHOX2a(2)            <---------HSFB2a(2)  --------->DAG2       <---------ANAC55(2)      --------->AHL20(1)            *TSS<----------DOF2 ================================bZIP_DOF       <---------AHL20(1)           <----------DOF2  ------- ---------->DOF2      ------------>OsbHLH66     --------->AHL20(2)       <---------At4g35610---------   tgataaaggaattgggaattaagacacgtgggagcttactagtggtagaatataattgatcctcggaaggaagtcagccctttcctttcccgatgaaagc  940800                                                       <------MYB83                                                       <------MYB46(1)       --------->ANAC55(2)                                                      --------->MYB46(2)     <---------ANAC55(2)    <                             --------->YAB1       <------MYB46(1)           <-------TEIL          <--     <---------AtMYB61    --------->WOX13(1)      <------MYB83          --------------->AtSPL3   <--- -->ANAC58          <---------HSFC1(2)            <---------MYB46(3)    <---------------AtSPL3   ---- -->ANAC58          --------->HSFC1(2) --------->ZAT6 --------->MYB59   <---------------AtSPL8<------ZmHOX2a(1) ->DOF2           <--------P<---------ATHB12    <---------MYB52(1)  --------->CCA1(2)----------->HVH21   cagagttttggtgtcccttggtagtttccaatcagacattaacacaaacagttggtttggtaattggaagagatgaagtacgtattggtgactggaggag  940900        <---------ANAC58   <---------ANAC46        <---------ANAC58<---------ANAC46          ---------->DOF2     --------->ZAT18   --------->SPL7     <------NtERF2     <---------ZAT18  --------->MYB52(1)  <---------DEAR3(1)  --------->ALFIN1   ----------->HVH21    --------->ALFIN1 <---------MYB46(3)  <---------SPL7     <---------ANAC58 ---------ANAC46    <-----------HVH21   <---------ANAC46                         <---------YAB1 -------MYB46(3)   <---------ANAC58     <---------ANAC58   <---------ZAT18      <---------AHL20(2) ------AtMYB61     <---------ANAC58<---------ARR14(2) <---------ANAC58          --------->AHL20(2) ----->ALFIN1 ---------->DOF2      --------->ARR14(2) <---------ANAC58<-----------GT1   tggtgagtgggcttggcaaaggcgttacggcgagtagtatcggcgtggtgcttaaagcttgtggccttggagttacctccattaaaattggtttggaatt  941000                                                                            --------->ZAT6                                                                           --------->ZAT14                                                                           <---------ZAT14                                                                     <---------ARR14(2)                                                                     --------->ARR14(2)                                                                 <-------TEIL                                                                <------ZmHOX2a(2)                                                               --------->ARR11(3)                                                               <---------ARR11(3)                                                               <---------ARR14(2)                                                               --------->AGP1                                                               --------->ARR14(2)                  XX                                                              --------->At4g35610                  <-                                                              <---------At4g35610   <---------ANAC46<                                                 --------->AHL20(2)  <---------ARR11(3)           ---                       <----------DOF2           <---------AHL20(2)  <-----------ARR10            <--           <-----------GT1                       --------->AHL20(1) <---------CCA1(2)<---------------AtSPL8   tctcatttccatttcacgtttgagcctttttttttgtgttgatgttccaaattttttgttatgcagatccatatctgaacactgatgctggtacaatgtc  941100                                                                                            <--------       <---------AtLEC2                                        --------------------->WRI1 <---------ANAC58 XXXXXXXXXXXXXXXXXXX>MIR853                     <---------ANAC58       <---------AtLEC2   <---------ANAC58 --------DAG2                       <---------ANAC46           <----------DOF2            <---------ANAC46 ----------DOF2                   <---------MYB46(3)          <---------ANAC58  <---------WOX13(1) ------------>AGL15              <---------AtMYB61            <---------ANAC58--------->ATHB12     -- -------------AGL15            --------->YAB1   <---------ANAC58   <----------DOF2  <---------WOX13(1)   cccttttgagcatggagaggtttttgtactcgatgatggtggagaggttttcttgttttcatttgctttctttgcattgctcattgatagatgcttgttg  941200                              --------------->AGL15      <---------HSFB2a(2)                             ------>ZmHOX2a(2)           --------->HSFB2a(2)                             <-----------------AG    <---------GLK1(1)                           --------->ARR11(3)        --------->GLK1(1)                           <---------ARR11(3)       --------->ARR11(3)                         <-------TEIL         --------->ANAC58            ---------->DOF2                        <--------P            --------->ANAC58          --------->MYB46(3)                     <---------TOE2(3)        --------->ANAC46      <---------MYB52(2)                     <---------TOE1(3)     --------->TOE1(2)      --------->ZAT6 -MYB46(3)   <---------MYB52(1)           <---------HSFC1(2)   ----------->HVH21          --------->MYB46(3) -------->DOF2  <---------ANAC46--------->ATHB12    <---------ARR11(3) -------->P  ----------->RAV1(1)   ctaaagaattatgctgttttgtgaaggttgatcttgatttgggaaactacgaaagatttctcgatgtgacactaaccaaagacaacaacataaccactgg  941300  Previous    Next  AGI:  At4g02120.1    Description:  CTP synthase, putative / UTP--ammonia ligase, putative. similar to CTP synthase, putative / UTP--ammonia ligase, putative [Arabidopsis thaliana] (TAIR:AT1G30820.1); similar to EMB2742 (EMBRYO DEFECTIVE 2742), CTP synthase [Arabidopsis thaliana] (TAIR:AT3G12670.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20320.2); similar to CTP synthase, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99559.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO40083.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83528.1); contains InterPro domain Glutamine amidotransferase, class I, active site (In Range:  from: 940778    to: 944291    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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