Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------LBD16                                                           <---------ARR14(2)                                                           --------->ARR14(2)                                                        <---------ANAC58                                                        <---------RAP2.6(2)                   ------>NtERF2                        <---------RAP2.3(2)                         -                  ----------->HVH21                     <---------ANAC58                            -                  --------->DEAR3(1)                    <---------ANAC46                            <            <---------GLK1(2)                          <---------LBD16                            ---      <---------YAB1                                <-------GAMYB                                <---   ------->GAMYB  <---------ETT(1)                 <---------MYB46(3)                           -----   ----------->HVH21                               ------>ZmHOX2a(2)                           ------  <---------MYB52(2)                           ----------->HVH21                              <------  <------------AtMYB77                       --------->ANAC55(2)         <---------ANAC58     ------- <---------At4g35610                    ----------->HVH21<---------RAP2.3(1) <XXXXXXXXXXXXXXXXXXXXXMIR393A/B --------->At4g35610         <---------ANAC46<---------At4g35610         <---------ANAC58     ------- ----DOF2 <---------ATHB12 <---------ANAC46<-----------RAV1(2)<---------ANAC46               <-------   tgcaactgaccattgattctccgaccatgatgtgtgtttgtattgacaggtgatcgttgcggcttcggagagatgtcttgatgtgattccattggagcca  897100  ------>ZmHOX2a(2) <------ZmHOX2a(2) -------->ARR11(3) -------->ARR14(2) ---------ARR14(2) ------>DEAR3(1) ---NtERF2 ->NtERF2 --->DEAR3(1) ---ABI4(2)                                                  <---------GLK1(2) -->ATERF1(1)       --------->ANAC46                  ----------->RAV1(1)      --------->YAB1 -->MYB46(3)        --------->ANAC58        --------->At4g35610               <---------YAB1 --ATERF1(1)        --------->ANAC58  ---------->DOF2--------->MYB46(3)---------->DOF2     ----------   ccgatcttggacaaactcatacaagctaaactcgctaaatcaaaggagcacaacaacaacacagtttcttcttaaaagttttcataactcaaacaaagta  897200                    <-----------GT1                <---------AHL20(2)               <---------AHL20(1)                                                                   -               --------->AHL20(2)                  --------->YAB1                                <---               <---------AHL20(2)           <---------ZAT6                                       ----               --------->AHL20(1)        <---------MYB52(1)                                 <--------    <---------YAB1 <-----------GT1<---------YAB1--------->WOX13(1) <-----------GT1          <--------   <---------ARR11(3)    <----------DOF2--------->LBD16         --------------->AtSPL8      --------- >DOF2  <-----------GT1<---------At4g35610  ----------->GT1     <---------------AtSPL8----------->GT1   tacatgatttttgccaatttatttccgcttcttgttatcatccgtagtgtaaatcaaaaccattgaattgtactctctagcattgaaccagtaaaatcta  897300   <---------ARR14(2)   --------->ARR14(2)  <---------MYB52(1)                                                                 --------->TOE2(3) --------->At5g28300                                                         ----------->GT1 ---------->GT1                                                              <---------ANAC55(2) ------ALFIN1                                           --------->AtLEC2   --------->CCA1(2) ----->ANAC46                                           --------->ANAC58  --------->ARR11(1) -ARR11(3)                   --------->ARR11(3)         --------->ANAC58  <---------ARR11(3) ---ARR10        <----------DOF2        <---------AHL20(2)            ---------->DOF2--------->TOE1(3) >ARR11(3)  <----------DOF2  <---------ARR11(3)         --------->ANAC46  --------->ARR11(3)   caccgtaacttcttctttacttttgtgaacaaatctttgaatttttttttttagcaacatgcaatttgacttaaaagatatgtaaaaccctaaaactaaa  897400                                                                             --------->ANAC55(2)                                                                             <---------TGA1a                                                                             <---------O2                                                                             --------->O2                                                                     --------->ANAC58                                                                     --------->ANAC58                                                             --------->YAB1  --------->TGA1a                                                            <-------TEIL    <---------LBD16                                                        --------->ARR11(3) --------->MYB52(1)      --                --------->ZAT6          ----------->GT1 <---------AHL20(1) <---------ALFIN1        <-              <-----------GT1         --------->ZAT18   <---------ARR11(3)----------->HVH21       <--           <---------ICU4          <---------ANAC58     --------->AHL20(1)<------NtERF2           ---          ------>ZmHOX2a(1)        <---------ANAC58  --------->AHL20(2)  <-----------HVH21 <---------AHL20(2)         <---------MYB59 --------->TOE2(3)       ----------->GT1    <---------At5g28300   --------->YAB1 --------->TOE2(3)       --------->TOE1(3)  --------->AHL20(2)   <-----------HVH21        --------->AHL20(2)   ctacataaattcctaattacactaaaaccctaaaattgagtgccgaaaaaatagaaaaaatattcatagtcacggcctcacgggtctctctattatataa  897500                                                       --------->ANAC58                                                       --------->ANAC58                                                       --------->ANAC46                    <---------ARR11(3)         *TSS  ---------->DOF2 ------->GLK1(1)    --------->ARR11(3)         --------->DAG2 --------GLK1(1)   --------->RVE1(1)          ---------->DOF2 -------ARR11(3)   --------->CCA1(1)       --------->YAB1 ------>ARR11(3) --------->AHL20(2)       <---------ATHB12                                 --------->MYB46(3)   gaactccttgagacttaaaaaaaatctcacattccctctctctaatcaaaaagctaaaagcaatggccactgcgatgtcttactcttctcaaaaccatcg  897600                                                                             --------->ANAC58                                                                             --------->ANAC58                                                                         --------->ANAC46                                                                         --------->ANAC58                                                                         --------->ANAC58                  --------->MYB46(3)                                    <------NtERF2            --------->TOE1(3)                                          <---------ATERF1(1)            --------->TOE2(3)                                          ------>NtERF2         ------>MYB46(1)                                              <---------DEAR3(1)      <------         ------>MYB83                                                 --------->At1g77200    <-------       --------->MYB46(3)                                             --------->DEAR3(1)   <-------GAMYB       <---------MYB52(2)                                             ----------->HVH21 --------->SPL7       <---------MYB46(2)                       <---------ALFIN1     --------->DEAR3(2)--------->MYB52(1)       <---------MYB55(2)                      --------->LBD16     --------->ANAC46    <---------ALFIN1       --------->AtMYB61                       ------>NtERF2 <---------At4g35610       --------->STY1(1)       <---------MYB111(1)                    --------->ANAC46    ------>ZmHOX2a(1)    <---------STY1(1)       <---------MYB111(2)  --------->TOE1(3) --------->RAP2.6(2)<---------ALFIN1     <---------SPL7      --------->ANAC58     --------->ZAT6<----------DOF2   --------->MYB46(3)--------->ANAC46--------      --------->ANAC58 --------->At5g28300   <---------LBD16 --------->At4g35610---------->DOF2   attcgagcaccaaaccctaatccaccgtaaccctaagcctcgtctttgccgcaactcttcaacagctcctcgccgacgcaagcaaagccctacggttgtt  897700                   <---------ARR11(1)                   --------->ARR11(3)                   <---------ARR11(3)                   --------->ARR14(2)             <---------ARR14(2)             --------->GLK1(2)         --------->RAP2.3(1)         <------NtERF2         --------->ATERF1(1)        ------>NtERF2        <---------ORA47(2)        <---------ATERF1(1)        <---------RAP2.3(1)        <---------ERF1                                 --------->At5g28300       <---------ATERF1(2)                             <-----------HVH21       <---------DEAR3(1)                     ------>ZmHOX2a(1)       --------->DEAR3(1)                    --------->TOE2(3)       --------->ATERF1(2)                 <------ZmHOX2a(2)       <---------RAP2.3(2)                <---------ARR14(2)      <---------ABI4(1)                   --------->ARR14(2)      --------->ATERF1(1)                 --------->AGP1     <---------RAP2.3(1)                  --------->ARR14(3)     <---------ATERF1(1)                  <---------GLK1(2)     ------>NtERF2 <---------ARR14(2)     --------->ARR11(3)     --------->LBD16                      <---------ARR11(3)    <---------DEAR3(1)                    <---------ARR14(3)                         --------->ANAC58   <---------LBD16<---------CCA1(2)     ----------->ARR10                            --------->ANAC58 -GAMYB<---------RAP2.3(3)         --------->ANAC58  <---------DEAR3(1)         <----------ID1   ---- --MYB46(3)  --------->ARR14(2)    --------->ANAC58 <---------LBD16           --------->YAB1 -------- --->GT1<---------DEAR4(2)    <----------ID1------>ZmHOX2a(2)            <---------------------WRI1   aaatctccggcggcgaatccaaatcttgtaatggaacaagtcaagatcctcaaacgcggtgagacattgagcgcgtttaataagaacaaggaaaacatta  897800                                                       <---------ARR14(2)                    <-------                                                <---------YAB1                            --------->GLK1(2)       --------->CCA1(2)               <---------ARR11(3)                                <---------GLK1(2)  ------>NtERF2                        --------->ARR11(3)                                --------->ARR11(3) ----------->HVH21                 ---------->DOF2     --------->ARR14(2)                <---------ARR11(3) --------->DEAR3(1)              <---------YAB1------>ZmHOX2a(2)                        <---------RVE1(1) ----->At4g35610              ----------->GT1 <---------At4g35610              ----------->HVH21 ->TOE2(3)                    <---------YAB1 <---------AGP1                  ----------->RAV1(2)   gctccgacgatacaagacgacctgttttgaagatgataaaagatgttgatctgattgtatcggctactaatagaattggacctgaaccagagattttgat  897900                                                                 <---------ZAT2                                                           --------->DEAR3(1)                                                          --------->RAP2.3(1)                                                          <------NtERF2                                                          --------->ATERF1(1)                                                         ------>NtERF2                                                         --------->ABI4(1)                                                         <---------ATERF1(1)                                                        <---------ATERF1(2)                                                        --------->ANAC46                                                        --------->RAP2.6(2)                                                        --------->RAP2.3(3)                                                        --------->DEAR3(1)                                                       --------->RAP2.3(1)                                                       --------->DEAR4(2)                                                       --------->ORA47(2)                     <---------ZAT14 <---------At4g35610--------->RAP2.3(2)      ------>ZmHOX2a(2)            <------NtERF2       --------->ERF1     <------ZmHOX2a(2)            --------->LBD16      --------->ATERF1(1)    --------->ARR14(2)           --------->DEAR3(1)   <---------RAP2.3(1)    <---------ARR14(2)   <-----------ARR10<---------WOX13(1)------>NtERF2 --YAB1     <----------DOF2     <---------LBD16   <----------DOF2--------->ZAT2             <--------   gaaacagatcggagctttgggattgcagagcttcgccggagctaattgctctctttcgccgcctccaagctgtgttccaattccatgtttcttagggacg  898000  Previous    Next  AGI:  At4g02030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40112.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAR07074.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP03421.1); contains domain PTHR15954 (PTHR15954) Range:  from: 892176    to: 897318    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g02040.1    Description:  similar to unknown [Populus trichocarpa] (GB:ABK93361.1) Range:  from: 897547    to: 898370    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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