Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           --------->ATHB12                                         <---------ICU4                                        <---------YAB1                                      --------->YAB1                                 <---------YAB1                        --------->AHL20(2)                              ------>MYB83 <---------YAB1              <---------AHL20(2)                              ------>MYB46(1)                         --------->YAB1                <                       --------->ANAC58 --------->ICU4             --------->YAB1                  --                       --------->ANAC58<---------TOE2(3)        <----------DOF2                    <-                     ---------->DOF2<---------WOX13(1)    ----------->GT1--------->YAB1        <-----   agccattactcatcgtagagccagaaagcaccaatctcattgatgattactggctaagagaagtaacttttataaaaataacttatagagttgtgagaga  891800                                          --------->YAB1                                          <---------AHL20(2)                                          -------->ATHB1                                          -------->HAHB4                                          <--------HAHB4                                          <---------ICU4                                          --------->ATHB51                                      <---------AHL20(2)                                      --------->AHL20(1)                                      --------->AHL20(2)                                      <---------AHL20(1)         --------->AHL20(2)                                  --------->AHL20(2)             <---------AHL20(1)                                  <---------AHL20(2)             <---------AHL20(2)            --------->YAB1    --------->ICU4 --------->YAB1 --------->AHL20(2) ---------YAB1               <----------DOF2<---------YAB1  <---------AHL20(2) ------->ARR11(3)          ---------->ID1<---------YAB1  --------->ARR11(3) --------ARR11(3)      <---------ANAC58  <---------ATHB51<---------ARR11(3)                        -- ----At4g35610         <---------ANAC58  --------->ICU4<---------TOE2(3)                <----------DOF2   tgatatttgaagtttgataacttaagcttgtctttattaattaattattatagagttgagattttattttattttgacatcgagtttggactttgtatag  891900                  -------->ATHB1                  <---------ICU4                                                                   --                  --------->ATHB51                                                              <----                  --------->ATHB12                                                             ------                 --------->ICU4                                                               -------             <---------YAB1     <---------ANAC55(2)                                       --------->ANAC58          <---------AHL20(2)    ----------->GT1                                      --------->At4g35610          --------->AHL20(2)  <---------ATHB12                         <---------TOE2(3)  --------->ANAC58 --------->GT1   <---------ATHB51          ------->TEIL             <---------AHL20(2)  ---------->DOF2   gtgataaaacaatttatgaattattggggtcaataagtaaaaatgtatcatttcgaaaaatagtttcaaatttatggatttttgaacagctaaagccaat  892000                                                   --------->ZAT6                                                 --------->YAB1                                                <---------ATHB12     <---------DAG2                            ------>MYB46(1)     <----------DOF2                        --------->MYB46(3)   ------->TEIL                            ------->TEIL  <-----------GT1                       --------->MYB46(3) ------------->AtSPL8                   <---------MYB52(2) -----ATHB12                         --------->ZAT18 --------->ANAC46         --------->DAG2 --->GLK1(2)                --------->AHL20(2) ------>MYB83                  ---------->DOF2 -->WOX13(1)               <---------AHL20(2) --------->WOX13(1) <---------MYB59           --------->At4g35610   ctatgtacttttcaacgaataaaactgatttaaaataagtgaacgaaccaatcacactaaaccagtgcctaatctcataaaaagtaatccgactgctaaa  892100                                                                                               ------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                              -------                                                                                            ------>NtERF2                             <---------MYB52(1)                                             <--------                          ------>ZmHOX2a(2)                                                --------->DEAR3(1)                         <------ZmHOX2a(2)                                                 ----------                        --------->ARR14(2)                                             <---------HSFB2a(1)                        <---------ARR14(2)                                             --------->GLK1(1)                     --------->ANAC58                                                  --------->HSFB2a(1)                     <---------ANAC55(2)                                               <---------GLK1(1)                     --------->ANAC58                             <---------DAG2      --------->ARR14(2)                  --------->ARR14(2)                              <----------DOF2     <---------ARR14(2)                  <---------ARR14(2)                             <---------ANAC58     ------->TEIL             --------->ARR14(2)                                  <---------ANAC58    <---------GLK1(2)             <---------ARR14(2)                    ------>ZmHOX2a(2)               <---------ANAC55(2)      --------->LBD16--------->ANAC55(1)          <------ZmHOX2a(2)                --------->ANAC55(2)    <---------LBD16  --------->ANAC55(2)         --------->ARR14(2)         *TSS   <---------YAB1 <---------ARR14(2) <---------LBD16              <---------ARR14(2)   ------------>CBF--------->GLK1(2) --------->ARR14(2)--------->CCA1(2)   --------->ATHB12<---------GLK1(2)    <-----------GT1--------->ANAC46   ccgtattccggttcgaatcggatacggatccgtttcccagttgattagtcggatccagtttcttcttgctttttcaattcacattacgaatctccgacgc  892200                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                         --------->ATERF1(1)                                                                         <------NtERF2                                                                         --------->ZAT2                                                                         <---------ZAT2                     <---------CCA1(1)                                   <---------At4g35610                     <---------RVE1(1)                                   --------->At4g35610      --------->At4g35610                                               <---------ATERF1(1)      <---------At4g35610                                             --------->ATERF1(1)  --------->GLK1(2) <---------ARR11(3)                                <------NtERF2 >NtERF2            --------->ARR11(3)                           <---------ANAC46 -->DEAR3(1)  ----------->HVH21                                 <------NtERF2 -->ANAC58   <---------MYB52(1)            <-----------RAV1(2)  --------->ATERF1(1)      --------->DAG2 -->ANAC46  --------->LBD16       --------->HSFB2a(2)         --------->ETT(2)         ---------->DOF2 -->ANAC58 <---------HSFB2a(2)    <---------HSFB2a(2)         <---------DEAR3(1)    --------->ANAC58 -ATERF1(1)--------->HSFB2a(2)  <------NtERF2 <------ZmHOX2a(1)------>NtERF2        --------->ANAC58 ->HVH21  <---------LBD16     <---------DEAR3(1)    ----------->GT1  <---------ATERF1(1)---------->DOF2   caaaattctgcttccggtaacagatattttcgtcgtcgagaagaagcaggagtttagaaaaatggcgacggaggcagctccgatggacgaaaaggcgaag  892300                                      ------>ZmHOX2a(1)                                    ------>ZmHOX2a(2)                                    ===============================HOX2a_HOX2a                                   <------ZmHOX2a(2)                                   ================================HOX2a_HOX2a                                  <---------ARR11(3)                                  <---------GLK1(2)         ====================================HOX2a_HOX2a         ------>ZmHOX2a(2)        --------->ARR14(2)        =====================================HOX2a_HOX2a        <------ZmHOX2a(2)         <---------ARR14(2)                --------->ANAC58       >>>>>>>>>GATA-3           <---------ARR14(1)                 --------->ANAC46       >>>>>>>>>GATA-4          --------->LBD16                     --------->ANAC58       >>>>>>>>>GATA-2        <---------LBD16               ------>ZmHOX2a(1)       --------->ARR11(3)    ------->TEIL               --------->ARR14(2)       >>>>>>>>>GATA-1       --------->MYB52(1)         <---------ARR14(2)                         <-       <---------ARR11(3) --------->ANAC58             ----------------------->TaNAC69(2)   <--------       --------->AGP1     --------->ANAC46            <---------MYB46(3)            --------->TOE2(3)      --------->GLK1(1)   --------->ANAC58           --------->ALFIN1     <----------DOF2 ------->GAMYB   agaatgagagatctattgtcgagcttctacgcaccggatccttcaatctcgacgagtggttcctccatcaacgcctctttcgataacatcaacagcactt  892400                                                      <---------ARR14(2)                                                      --------->KAN4(2)                                                      --------->ARR14(2)                                                     <---------KAN4(1)                                                     <----------TaMYB80                                                     --------->KAN4(1)                                                     --------->HSFB2a(1)                                                     <---------HSFB2a(1)                       ------>ZmHOX2a(2)            <---------KAN4(2)                      <---------GLK1(1)             --------->ARR14(2)                     <---------AGP1                 ---------->TaMYB80                     <---------ARR11(3)            <---------GLK1(2)                     <---------CCA1(2)                     ------->TEIL          <---------ANAC58         ----------->RAV1(1)----------->GT1     <---------At4g35610                   <---------ANAC46      --------->TOE2(3)   <---------ANAC58 ---------DOF2       --------->ARR11(3)    <---------ANAC58   --------->ARR14(2)     <---------ANAC58 -ALFIN1   <---------ICU4     <--------P<---------MYB52(1)    <---------ARR14(2)     <---------ANAC46   cctttgatgctgatcagtacatggatctcatggttagtcttcgtttcttgtcagaatattcgtgaatcgtcaacacaagcgtcaatagcttgtatattgt  892500                                                                                                  <--                                                                                            ---------                                              --------->ARR11(3)                           ------>ZmHOX2a(2)                                   <-------TEIL                                            ==========                                  --------->ARR14(1)                                      <------ZmHOX2a(2)    --------->ATHB51             --------->ARR14(2)                                       --------->CCA1(2)    -------->ATHB1               <---------GLK1(2)            <--------P                  ===========    --------->ATHB12             --------->ARR11(1)           <---------MYB52(1)         --------->ARR14(2)   --------->AHL20(2)            <---------ARR14(2)         ----------->GT1              --------->AGP1   <---------ATHB51            ----------->ARR10------>ZmHOX2a(2)                        <---------ARR14(2)   <---------AHL20(2)    <---------ZAT14      <---------ARR11(3)--------->MYB52(2)     ----------->ARR10   --------->ICU4        --------->ZAT14  <----------DOF2   <---------MYB46(3)    <---------YAB1 <---   atcaaattattgagtatttcgattcactgaagttagattcggctctttgatcttggtctaagtggttagttcgaaatttagaatatgtttagatccgact  892600                                                                       <---------ANAC58                                                                       <---------ANAC58                                                                      <-------TEIL                                                                     --------->ARR11(3)                                                                   <---------HSFB2a(1)   <----------DOF2                                                 --------->HSFB2a(1) -------MYB52(1)         <---------ANAC58                          --------->HSFC1(2) -->HVH21                <---------ANAC58                          <---------HSFC1(2) ====================HOX2a_HOX2a                               <---------ZAT14 ====================HOX2a_HOX2a            <-----------HVH21  --------->ZAT14 ----GAMYB    <------ZmHOX2a(1)        <-----------GT1    <---------At5g28300   gttatcttttggagcaggaatatagttgctagttttgaattctacccttcggatgaagtttacagtgcaaggttcttgtagaggtctcttgatcaatgtg  892700  Previous    Next  AGI:  At4g02020.1    Description:  EZA1 (SWINGER); transcription factor. Identical to Probable Polycomb group protein EZA1 (EZA1) [Arabidopsis Thaliana] (GB:Q9ZSM8;GB:O04246); similar to CLF (CURLY LEAF), transcription factor [Arabidopsis thaliana] (TAIR:AT2G23380.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40117.1); similar to EZ1 [Solanum lycopersicum] (GB:ABU96077.1); similar to swinger [Arabidopsis lyrata subsp. lyrata] (GB:ABK41491.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 886600    to: 891955    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g02030.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G21170.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40112.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAR07074.1); similar to unknown protein [Oryza sativa (japonica cultivar-group)] (GB:AAP03421.1); contains domain PTHR15954 (PTHR15954) Range:  from: 892176    to: 897318    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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