Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->AtMYB61                                                                                 --------->DEAR3(1)                                                                                 <---------ETT(2)                                                                    --------->LBD16 --------->MYB46(3)                                                                   --------->HSFB2a(2)                                                                  <---------LBD16--------->ETT(2)                                                               <---------GLK1(1) --------->WRKY38(1)                                                      <---------ETT(1)           --------->WRKY12                                                      ----------->HVH21         --------->ATERF1(1)                                                     ------>ZmHOX2a(2)         <---------ATERF1(1)                                                    --------->ARR14(1)         <-----------HVH21 <------ZmHOX2a(1)                                  <------ZmHOX2a(2)         --------->DEAR3(1) --------TOE2(2)                                    --------->CCA1(2)      --------->ANAC58 --------TOE1(2)                ------>MYB46(1)    --------->ARR11(3)      --------->ANAC58 ---->O2           <----------DOF2                 <---------ARR11(3)      --------->ANAC46 -----TGA1a     --------->GLK1(2)                  --------->ARR11(1)  <------ZmHOX2a(2) ---->TGA1a<---------LBD16    --------->MYB46(3)   <---------ARR14(2) <---------ARR14(2) ---->ANAC58   <---------GLK1(2)------>MYB83 <----------DOF2   --------->GLK1(1)<------NtERF2 ---->ANAC58  <------ZmHOX2a(1)<---------ALFIN1    --------->ARR14(2) --------->ARR14(2)           <- -----O2 ------>ZmHOX2a(2)    <---------MYB55(2)  <---------GLK1(1)<---------HSFB2a(2)  <---------ALFIN1   gtaggaatcgatctcaggaatctttagcatcacccactgagtctcggcttgaagatccgaccctgatttcccgatccaagccgtcgaccaccacattttg  856600                                 --------->KAN4(2)                                --------->HSFC1(2)                                <---------HSFB2a(1)                                <---------HSFC1(2)                                --------->HSFB2a(1)                               ------->TEIL                               <---------ARR14(2)                                              <-----                               <-----------ARR10                                   <---------HSFB2a(2)                               <---------ARR11(1)                                  --------->HSFB2a(2)                               --------->ARR14(2)                      <----------DOF2 --------->GLK1(1)    ---------->DOF2           <---------ARR14(1)               ----------->GT1     --------->LBD16 --------->LBD16              <---------CCA1(2)          <------ZmHOX2a(2)     <---------ARR14(2) --------LBD16             <---------------------WRI1   <-----------HVH21      --------->ARR14(2)   aaccggaaaagactgagaaactctctgtcttcgaatcttcccaaggagtttgtgagacgatcagagggtgattctttggtgaatccgagaaaccctcctt  856700                                                                                 --------->ANAC55(2)                                                                                 <---------ANAC46                                                           <---------At4g35610   <---------ANAC55(2)                                    <------ZmHOX2a(1) <---------ANAC58           <---------ANAC58         <---------ANAC46 <---------ARR14(2)          <---------ANAC46           <---------ANAC55(1)         <---------ANAC58 --------->ARR14(2)     --------->CCA1(2)               <---------ANAC58         <---------ANAC58--------->ATHB12       --------->ARR14(2)        ---------->DOF2     <---------MYB52(1)  <------ZmHOX2a(1)      <---------ARR14(2)      ----------->HVH21 <------ZmHOX2a(1)    <-------GAMYB     <------ZmHOX2a(1)   --------->ATHB12 --------->At4g35610 <-----------GT1   ---- -----DOF2      <---------LBD16   --------->ALFIN1    <---------ANAC58<---------ANAC46  <---------TOE2(3)   tgtgagcgttggcttgaactcggaggaggattgggagaggagcatcagtggatatggagtgagatgagaatggtgtgaaagttacgttttgaggaacatc  856800                                            <------MYB46(1)                                            <------MYB83                                            ----------->GT1                                         <---------ARR14(2)             <---------ANAC58         <---------ANAC46                --------->ARR14(2)             <---------ANAC58    --------->ARR14(2)                   <---------MYB52(1)        --------->ARR14(2)     --------->DAG2    <---------ARR14(2)            <---------HSFB2a(1)              <---------ARR14(2)    ---------->DOF2   <------ZmHOX2a(1)              --------->HSFC1(2)              --------->ATHB12 <----------ID1 ------>DOF2                      <---------HSFC1(2)          <------NtERF2   --------->ATHB12   aaagaggattggagtagagtctttggcacagagagacccttcggataggttaaatgagtttggctgcaagattggcttagttattggaacaaaaagaggt  856900                                       <---------bZIP60(2)                                  <---------ANAC46                                  <---------ANAC58                                --------->GLK1(2)                               <---------GLK1(2)                 --------->ATHB12 <---------ANAC58                                                  <                 <---------MYB46(3)    <---------ANAC46                                             <               <---------MYB52(1)<-------TEIL                                                     <-- <---------ARR14(2)    ----------->HVH21 --------->ALFIN1     <------ZmHOX2a(1)                <----- --------->ARR14(2)<---------WOX13(1)<---------ZAT14    <---------ZAT14         <------ZmHOX2a(1) <--   ttggattcgattacatcgttgattgatgacagagattcgtgaagtggagccatgagagaacagaggaagtttgaaaaacagaggaaatgaaaacagagga  857000                                                                           <------ZmHOX2a(2)                                                                          <---------ARR14(2)                                                                          --------->ARR14(2)                                                                          <---------ARR11(3)        *TSS                                                              --------->ARR14(3)       <---------YAB1                                                     <---------ARR14(3)  <------MYB83                                                            <---------GLK1(2)  <------MYB46(1)                                                         --------->ARR11(3) --------->MYB111(2)                                                     <---------HSFB2a(1) --------->MYB55(2)                                                  ------->GAMYB --------->MYB46(2)               <---------AHL20(2)           <---------ICU4 <---------MYB46(3)               <-----------TBP              --------->YAB1    --------->LBD16 --------->MYB111(1)              --------->AHL20(2)          --------->ICU4  ------>ZmHOX2a(1) --------P                <----------DOF2                     <---------YAB1------>ZmHOX2a(2) ---------MYB55(1)       <---------ANAC58                  --------->AHL20(2)--------->TOE1(2) ----MYB46(1)            <---------ANAC58                ----------->GT1 --------->HSFB2a(1) -ZmHOX2a(1)        <----------DOF2                    ---------->DOF2  ----------->ARR10 ----MYB83      <----------DOF2 <-----------TBP   ----------->GT1 --------->MYB52(1) <-----------GT1   tggtaggtgatgaaaatgctttcttttgctttctatatatatacagagaaaatggataaaagtaattataacggaagatcctccgagtttccatacttca  857100                                 ------>MYB83                                 ------>MYB46(1)                               <---------MYB46(2)                                           <--------                               <---------MYB59                           <---------------------WRI1               <-----------GT1<---------ANAC55(2)              <---------ANAC58             <--------  <---------ANAC58            --------->ANAC55(2)            <-----------GT1               --------->ICU4  --------->ANAC55(2)    --------->ATHB12                <---------RVE1(1)    --------->ATHB12    ---  <---------ANAC55(2)    <---------ICU4                 --------->ARR11(3) --------->At4g35610   <---  <---------ANAC46   <---------AHL20(2)          --------->ICU4<---------ANAC58            --------->AHL20(2)  <---------ANAC58   --------->ATHB12   <----------DOF2 <---------ARR11(3) <---------At4g35610  <----   tatttcgtattatctaattacatttattgattacctaatcttctttgtgtattaatgagatttttacttgcatagggagatgatttcaatgtaataaata  857200                                                                                  ----------->GT1                                                                            --------->LBD16                                                                           <---------------AGL15                                                                           --------------->AGL15                                                                           <---------ANAC55(2)                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                           --------->ANAC55(2)                                                                           <---------HSFB2a(2)                                                                           --------->HSFB2a(2)                                                                           <---------ANAC58                                                                          <-----------------AGL1                                                                          <-----------------AGL2                                                                          ----------------->AGL1                                                                          <-----------------AG                                                                          ----------------->AGL2                                                                          ----------------->AG                                                                       ------>ZmHOX2a(2)                                                                      <---------HSFB2a(1)                                                                      --------->HSFB2a(1)                                                                      <------ZmHOX2a(2)                                                                     --------->ARR14(3)                     --------->ICU4                                  <-----------ARR10                   ----------->GT1                                   <---------ARR11(3)               <---------WOX13(1)                                    --------->ARR11(3)              >>>>>>>>>ARR2                                          --------->ARR14(2)        <---------AHL20(2)                                           <---------ARR14(2)     --------->AHL20(1)                          --------->ANAC46    <---------ARR14(3)     <---------AHL20(1)                          --------->ANAC58   <------ZmHOX2a(1) -AHL20(2)    >>>>>>>>>ARR1                      --------->ANAC58  <---------HSFC1(2) -ICU4--------->AHL20(2)--------->ICU4      --------------->AtSPL8 --------->HSFC1(2) -------->GT1--------->ATHB12           --------->ARR11(3)         --------->HSFB2a(1) ------ANAC55(2)  ---------->ID1        <---------ARR11(3)        <---------TOE1(2)--------->At5g28300 -----LBD16 <---------YAB1             <---------CCA1(2)   <---------YAB1 <-----------------AGL3   cggataatatatatatgattgtcgtaattagggaaactgatatatctttgtacgaaatactataatcgaaggatcttccgtaaatggtaaatacaaactt  857300                                                                                    ---------->DOF2                                                                          --------->ANAC58                          ---------->DOF2          <---------ANAC46       --------->ANAC58                      <---------------------WRI1 <------MYB83          <------ZmHOX2a(2)                     ------>NtERF2               <------MYB46(1)      --------->ARR11(3)    ------->TEIL    --------->DEAR3(1)  ---------->DOF2               <---------ARR11(3)  ---------->DOF2   tctatgaaactttcgagtttcgacgacgaaaagatggaagaaaaaagaagttggtgtatgatgttcttgcaagatcaagaaactactaaagaaaaagaaa  857400                                                                    <---------ANAC58                                                                  ------->TEIL                                                               --------->O2                                                               --------->TGA1a                                                               <---------O2                                                               --------->ANAC55(2)                                                               --------->ANAC55(1)           --------->YAB1                                      <---------ANAC55(2)          <---------YAB1                                       --------->ANAC58         --------->AHL20(2)                                    --------->ANAC58       <---------AtLEC2       --------->AHL20(1)            <---------TOE2(3)         <---------TGA1a    <---------ANAC58      --------->AHL20(2)         --------->YAB1                --------->ANAC46   <---------ANAC46      --------->YAB1          --------->YAB1          <---------YAB1<---------ANAC58 <-------TEIL   --------->YAB1          ----------->GT1            <---------AHL20(2)          <---------ANAC58   ctttagaataatattatagttttttgagtcagtaatattaagaaacaaaatgtcatattattcacacgtagcttattcatgtctacgtgcatgtaatgta  857500  Previous    Next  AGI:  At4g01970.1    Description:  ATSTS (ARABIDOPSIS THALIANA STACHYOSE SYNTHASE); galactinol-raffinose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds. similar to SIP1 (SEED IMBIBITION 1-LIKE), galactinol-sucrose galactosyltransferase/ hydrolase, hydrolyzing O-glycosyl compounds [Arabidopsis thaliana] (TAIR:AT5G40390.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40135.1); similar to stachyose synthase [Stachys affinis] (GB:CAC86963.1); similar to stachyose synthetase variant 1 [Cucumis sativus] (GB:ABV44498.1); contains InterPro domain Raffinose synthase (InterPro:IPR008811) Range:  from: 853922    to: 857008    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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