Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        <------ZmHOX2a(2)        --------->YAB1                                          <---------ZAT14       <------ZmHOX2a(2)                                        --------->ZAT14      <---------ARR11(3)              --------->YAB1            --------->ZAT18 <---------ZAT18                     <---------ATHB12 --------------->AGL15              --------->ATHB12 --------->ZAT14        ==============================================MADS_MADS        <---------ARR11(3) <---------ZAT14        --------------->AGL15         <---------------AGL15        --------->YAB1  --   cagtacacgatcatatactactactactacatttatcaaatcatatactactactactacatagagtacacgatcgatgcgaaaatcaaaatcatttgca  797900                                --------->ZAT14                                <---------ZAT14                              --------->ANAC46                           <---------ZAT14                           <---------REM1(2)                        --------->At4g35610                      ------>ZmHOX2a(2)                     --------->CCA1(2)                     <------ZmHOX2a(2)                    <---------AGP1                    --------->AGP1                    <---------ARR11(3)                    <---------ARR14(3)                    --------->ARR14(3)                    <-------TEIL                             <-                    --------->ARR11(3)             <------ZmHOX2a(2)                               --                    --------->ARR14(2)            <---------TCP20                             -------                    <---------ARR14(2)            --------->ARR14(2)                          -------                   <---------CCA1(2)              <---------ARR14(2)                          -------             ---------->DOF2<---------ALFIN1 --------->MYB52(1)                               ------- ----------->GT1  ----------->ARR10          <-----------GT1                               <--------- -------->DOF2  <---------At4g35610  ----------->GT1------>ZmHOX2a(2)               <----------------   aaaaagataaacctattaagcagatctgctacacagcactggaaaattaacggatccacatacgttttaaatctgtataaatcacaaacgatataaccta  798000                                                 --------->YAB1                                                <---------YAB1                                               --------->AHL20(2)                                               <---------AHL20(2)                                               --------->AHL20(1)                                              <---------ICU4                                              --------->YAB1                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)           <-------TEIL        <-----------ARR10              --------->AGP1            <---------HSFC1(2)        --------->GLK1(2)              <---------AGP1            <---------HSFB2a(1) --------ARR11(3)                      <---------ARR14(2)        --------->HSFC1(2) ------->ARR11(3)                      <-----------ARR10         --------->HSFB2a(1) -->TOE2(2)                            --------->ARR14(2) <---------ANAC58 -->TOE2(3)                            <---------ARR11(3) <---------ANAC58        --------->ARR14(2) -->TOE1(3)                            --------->ARR11(3) <---------ANAC46        <---------ARR14(2) -->TOE1(2)                 --------->ANAC46 <---------YAB1     <---------------AtSPL8 --GT1 <---------GLK1(2)  <---------ALFIN1   --------->ICU4 <------NtERF2  <---------YAB1 -----WRI1           --------->YAB1   <---------CCA1(2)  <-----------------------TaNAC69(2)   agaacttgagaatctcatttcaatagtcacacactatcgcagatctaattataataacaggcgtagaaggttcgaatattatcaaatctgaatcgaaacc  798100                                                                                                    -                                                                                                    <                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                                 <---                                        --------->LBD16                                        ------               <---------ANAC58        --------->ANAC46                                        ------               <---------ANAC58        <---------ANAC55(2)                                    -------      --------->ARR11(3)     <----------ID1                                                 <--------      <---------ARR11(3)   <-----------GT1 ---------->DOF2         <---------ATHB12         ---------   catagaaaaatctcatttcgtttcagatttaacaacaaaacccgtaaaagcatcgcctaaaaactcgaaatcaataagacggagaagaagagcgaaacct  798200           --------->CCA1(2)           <------ZmHOX2a(2)          --------->ARR11(3)          <---------ARR11(3)          --------->ARR14(2)          <---------ARR14(2)         <---------GLK1(1)  <---------MYB46(3) ----->NtERF2 ------NtERF2 --------RAP2.3(1) ---->NtERF2 ------->LBD16 -------DEAR3(1)                       <---------ARR11(3) ------LBD16                           --------->GLK1(2) --->TOE1(2)           ---------->DOF2 --------->ARR14(2) --->TOE2(2)------>ZmHOX2a(2)    --------->ANAC58 ---->RAV1(2) <---------LBD16    --------->ANAC58                         ------>NtERF2            <- -ARR14(2)--------->AGP1       ---------->DOF2                        <---------ANAC46 ----------->HVH21 >ARR14(2)<---------AGP1    --------->TOE2(3)                      ----------->HVH21  *TSS         --   gcggcgattagagatctggggagcctaaagcctcaaagcaaaatctgaacagcgagcgaagaaggaaacgagacggggacgatttgtggatgacaaggga  798300                                            <------ZmHOX2a(2)                                           <---------ARR14(2)                                           --------->ARR14(2)                                           <---------ARR11(3)                                           --------->AGP1                                           <---------ARR11(1)                                           <---------AGP1                                          <---------CCA1(2)                                          <---------ARR14(1)                                         --------->LBD16                                       <---------LBD16                                      --------->MYB52(1)                                    <---------ZAT14       <---------AHL20(2)           --------->ETT(2)     <-----------TBP         --------->WRKY12------>ZmHOX2a(2)           <---------ICU4  <-----------------AGL3     --------->WRKY38(1)                    ------------>CBF <---------At4g35610----------->HVH21<---------ALFIN1      <----------DOF2 --------ZAT18   <---------AHL20(2) <---------ETT(2)      <---------ANAC58                          - ------->ZAT18  --------->AHL20(2)  --------->ZAT14       <---------ANAC58               <----------DOF2   gtgagctatttatagggattaaatgacactgttgactgtccaccggatctataggtttttgcttttggacttcaattcttacttccatcggcttattcgg  798400                                                                                         <---------ANAC55(2)                                                                                      ----------->HVH21                                                                                     <-----------TGA1                                                                                     <-----------HVH21                                                                                    --------->ANAC58                                                                                    --------->bZIP60(2)                                                                                    <---------bZIP60(1)                                                                                    --------->TGA1a                                                                                    <---------ANAC55(2)                                                                                    --------->ANAC55(1)                                                                                    --------->ANAC46                                                                                    --------->O2                                                                                    --------->ANAC55(2)               <---------DAG2                                                       --------->bZIP60(1)               <----------DOF2                                                      --------->ANAC58              <---------ANAC58                --------->ANAC46                      <---------O2              <---------ANAC58               <-----------------AG                  <-----------STF1        <---------AHL20(2)              --------->YAB1                   --------->AHL20(1)        --------->AHL20(2)              --------->AHL20(2)               <---------AHL20(1)       <---------AHL20(2)          <---------MYB52(1)               <---------ATHB12<---------TGA1a    --------->AHL20(2)            --------->TOE2(3)      ----------->GT1 <---------AHL20(2)    <---------AHL20(2)           ----------->GT1       =======================================bZIP_DOF -------->REM1(1)     <---------ZAT6   <---------YAB1  ---------->DOF2   --------->AHL20(2)   -------   ctacatttatttatttgctttttagtgtttttaatgcgttaattataaacacaattggaaagtgaatcaaatcaatttattatctcacgtcacatgaact  798500                                                                                          <---------YAB1                                                                                         --------->KAN4(2)                                            <---------YAB1                              --------->KAN4(1)              --------->WRKY18(1)       --------->ARR11(3)                              <---------KAN4(1)             <-----------HVH21          <---------GLK1(2)                              <---------KAN4(2)            <------MYB46(1)             <---------ARR14(2)                 ------->TEIL<---------YAB1            <------MYB83                --------->ARR14(2)              <---------ANAC55(2)       --- --------->ARR11(3)                <-----------GT1                      --------->ANAC55(2)  <------- >TEIL     --------->MYB59  <---------AHL20(2)                   ----------->GT1     <------ZmHOX2a(1)   taacatattgtatttggtcatggctctgattttttttttacagattttgataccaagtatacttgtgtcgaaatatgtatttttgaaggattattctttg  798600                                                            <<<<<<<ZML2                   <----------                       --------->YAB1                    <---------HSFB2a(2)         <---------DAG2     --------->TOE2(3)<---------YAB1                  <-----------GT1          <---------ZAT6   ----- ------>ZAT6   <----------DOF2                     <---------ICU4   <----------DOF2  <----------DOF2 ---DOF2   --------->YAB1            --------->AHL20(2)  --------->HSFB2a(2) ----------->GT1    -----   tcactaatctaaatcatcttttttatgatggtctgaaaattaactaataccaatttttactagaacaattctttagaaatagtgatactttttcacaata  798700                                                                                   --------->AHL20(1)                                                                                   <---------AHL20(2)                                                                                  <---------AHL20(2)                                                                              --------->AHL20(1)                                                                              <---------AHL20(2)                                                                              --------->AHL20(2)    -                                                                        --------->AHL20(2)         <-                                                                        <---------AHL20(2)         <-                                                <-----------GT1     ------>MYB83  --------->AHL20(2)- -GT1                                       --------->AHL20(2)      ------>MYB46(1)--------->AHL20(2) ---->YAB1         --------->YAB1    <---------TOE2(3)         <----------ID1<---------AHL20(2)  ---- ---->AHL20(2)    <---------ATHB12   <---------TOE1(3)   <---------TOE2(3)   --------->AHL20(2)------   atatagtaatgtctctctctatcatttcaattgacatttaaggtttttatatacaagttaagaaaacaccaaatttaaattaaattaaattgtttcaacc  798800  Previous    Next  AGI:  At4g01850.1    Description:  MAT2/SAM-2 (S-adenosylmethionine synthetase 2); methionine adenosyltransferase. Identical to S-adenosylmethionine synthetase 2 (SAM2) [Arabidopsis Thaliana] (GB:P17562;GB:Q42263); similar to SAM1 (S-adenosylmethionine synthetase 1), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT1G02500.2); similar to MTO3 (S-adenosylmethionine synthase 3), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT3G17390.1); similar to SAM1 (S-adenosylmethionine synthetase 1), methionine adenosyltransferase [Arabidopsis thaliana] (TAIR:AT1G02500.1); similar to S-adenosylmethionine synthetase [Brassica juncea] (GB:AAK71235.1); similar to S Range:  from: 796097    to: 798286    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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