Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------ICU4                                                                                   --------------->AtSPL8                                                                                 <---------AHL20(1)                                                                                 <---------AHL20(2)                                                                                --------->YAB1                                                                               <---------YAB1                                                                              --------->AHL20(2)                                                                              --------->AHL20(1)                                                                              <---------AHL20(2)                                                                             --------->YAB1                                                                             <---------ICU4                                                                            <---------YAB1                              <---------TOE2(3)                             --------->ICU4                             <-----------GT1                              --------->YAB1            -                           <---------YAB1                                 <---------ICU4           --                         --------->YAB1               <---------TOE2(3)  --------->ICU4        ------                        <---------YAB1               <-----------GT1     <---------ATHB51 <----------DOF2                       --------->AHL20(2)          <---------YAB1        --------->AHL20(2)   <------                       --------->AHL20(1)        --------->YAB1          <---------AHL20(2)  --------                      <---------ICU4            <---------YAB1       --------->AHL20(2)  <---------DAG2                     --------->ICU4            --------->AHL20(2)  --------->TOE2(3)     ------------ -->ANAC55(2)     <---------YAB1               --------->AHL20(1)  <----------DOF2--------->ICU4  --- -->AGL15      <---------AHL20(2)             <---------ICU4       --------->TOE1(3)  <-----------GT1   aacatatagttttgtattttataaatattataaacgtttttctcttaaatattataaacgttttataaactttaaataattataatatttacctttttaa  792900                          <---------ICU4                     <---------AHL20(2)                 <---------ICU4                 <--------HAHB4                 --------->ATHB12         --------->AHL20(2)         <---------AHL20(2)        --------->TOE2(3) --------->YAB1        --------->YAB1   --------->ICU4      <---------AHL20(2) <---------ATHB51                                 <---------TOE2(3)     --------->YAB1  --------->AHL20(2)                             ---------->ID1 ---------->GT1 <---------YAB1                                     <-------GAMYB ------->DAG2   --------->ICU4 <---------YAB1                <---------TOE2(3) --->YAB1<---------YAB1  --------->AHL20(2)                  <---------TOE1(3) --------->AHL20(2) ---AHL20(2)  --------->YAB1   <---------ANAC46             ---------->DOF2    <---------AHL20(2)   < ->AHL20(2)   <---------ICU4   <---------ANAC55(2)         <---------AHL20(2) --------->AHL20(2)  --- --->AGL15 --------->YAB1<---------AHL20(2)    <---------TOE2(3)  <---------MYB46(3)             <--- ------->DOF2--------->ICU4 --------->ICU4  <---------AHL20(2)    --------->MYB52(2)  <---------AtLEC2   taaagtataatattaataatcatttaaataattatgtatagctaattttaagggatttgatttaaagtttgttgtttagattaaatttgaatgaataatg  793000                                                 ---------->DOF2                                           <---------TOE2(3)                                          ---------->DOF2                                         --------->AHL20(2)                                         <---------AHL20(2)                                      <---------ICU4          <---------AHL20(2)         <---------AHL20(2)         --------->AHL20(2)          --------->AHL20(2)     --------->AHL20(2)              --------->ICU4                                       <xxxxxxxxxx     --------->AHL20(1)              <---------ATHB51                                  <-----------HVH21     <---------AHL20(1)           <---------AHL20(2)                                 xxxxxxxxxxxxxxxx ---------WOX13(1)               <---------AHL20(2)                                 <---------ANAC55(2) ------>ATHB12       --------->AHL20(2) <---------YAB1                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ------YAB1   ---------->DOF2    --------->AHL20(2)     <---------AHL20(2)  ----------->GT1       <--   tgattgatatattaaataaagaattaaaaatcaaattaaataattaaagaaaaaagaattaatgccaatggtataccattgtaaataagtgtcaagtaga  793100                   ----------->GT1                                           --------->ANAC58    ----               <---------ICU4                                           <---------ANAC55(1)      ----               -------->HAHB4                            <---------MYB59<---------ANAC55(2)     <----              --------->ICU4                             --------->TOE2(3)   --------->ANAC58 -------              <---------YAB1                             --------->TOE1(3) --------->REM1(2) <-------            --------->YAB1                         >>>>>>>>>RAP2.2      <---------ANAC58   --------->YAB1  <---------AHL20(2)                               --------->TOE2(3)    <---------ANAC58  --------->ZAT6 xxxxxxxxxxxxxsmallRNA(si3)  ------->TEIL        ------>MYB46(1)        <---------ANAC46 ------------ xxxxxxx>smallRNA(si3)    ----------->GT1        ------>MYB83       <---------ANAC58    --------->MYB52(1) ----ZmHOX2a(1)--------->ATHB12                 --------->WOX13(1)  <---------ANAC58  <---------MYB52(2)   ggatttatttgctaaaatgattagaaaaatgtatatatagataccattaccaatctaaacctaaacacttacttgcgtgaagccatgaactaacaataat  793200      ------->MYC3    <-------MYC3                   <---------TGA1a                                                  -    ------->MYC3                   <---------ANAC58                                             ----- ----->YAB1                        --------->ANAC55(2)       *TSS                             <------ ---->HAHB4                        <---------ANAC58 <---------ZAT18                         --------- -----YAB1                         <---------ANAC55(2)  <---------ALFIN1                   <---------ATHB12 -->YAB1    ----------->TGA1       <---------O2  <---------ANAC58                         ------>MYB83 --ATHB51   ----------->HVH21      --------->O2  <---------ANAC58                         ------>MYB46(1) >CBF <-------MYC3                 --------->TGA1a  --------->ZAT18                      --------->WOX13(1)   aatacacatgtggtctgacgataaatctgattttcatacgtggcatactatgtgtgccccattctataaacaaattgctaatccaaaacaccaatcacac  793300                                       <------MYB46(1)                                       ----------->GT1                                       <------MYB83                                      --------->MYB59                                      --------->MYB46(2)                                      <---------MYB46(3)                                     <---------MYB55(1)                           <---------ANAC58                           <---------ANAC46                     <----------DOF2      ------>ZmHOX2a(1)                           <---------ANAC58    <---------ARR11(3)                   <---------MYB59 ----->ZmHOX2a(1)    <----------DOF2<---------MYB52(1)  <---------AHL20(2)       --------->GLK1(2) ---->ANAC46    <----------DOF2   <---------ANAC58      <---------YAB1          <---------GLK1(2) ---ALFIN1   <-----------GT1      <---------ANAC58     --------->AHL20(2) <-------TEIL        <------MYB83 >YAB1  <---------MYB52(1)---------->ID1       --------->ARR11(3)        --------->CCA1(2)    <------MYB46(1)   tcctctctctgtttttttcttttcttttggcgttttccgtttggtaaaagatttcatttttattagcttttcaagattcagagattcctaatttgttggt  793400                                         ----------------->AGL1                                 --------->LBD16                             <---------ATERF1(1)                                 ------>NtERF2                              --------->ANAC46                             --------->ARR14(2)                             --------->DEAR3(1)                             <---------ARR14(2)<---------LBD16              <---------ALFIN1                           <-------MYC3 ------>MYB46(1)                ------>ZmHOX2a(1)                           ------->MYC3 -------->P                  ------>ZmHOX2a(1)                        <---------ALFIN1------>MYB83               <---------ALFIN1                    --------->MYB46(3)  --------->ANAC46      ------>ZmHOX2a(1)--------->DEAR3(1)                  --------->ANAC46    --------->AtMYB61      <---------ALFIN1------>NtERF2                 <---------ZAT18 <---------ATERF1(1) --------->HSFB2a(1)  ------>ZmHOX2a(1)               <---------At4g35610  ------>NtERF2   ---------->TaMYB80<---------ALFIN1               --------->At4g35610 --------->DEAR3(1)<---------HSFB2a(1)  <---------ATERF1(1)            <---------At4g35610 --------->ANAC46 --------->LBD16 ------>ZmHOX2a(1)   --------->YAB1            --------->At4g35610<---------LBD16--------->MYB52(1)<---------ALFIN1------>NtERF2          --------->YAB1------->GAMYB <---------ALFIN1<---------ARR14(2) <---------ALFIN1         <---------ATHB12 --------->O2<---------MYB111(2)    <xxxxxxxxxxxxxxxxsmallRNA(se3)     --------->MYB46(3)--------->MYB46(3)<-----------------AGL1 <xxxxxxxxxxxxxxxxsmallRNA(se3)    <--   aaatggaaccactcatcagcccacaaccacgtttccgcctccaacccataccggaaaatccctcctcctcctcctcctccgcctccatcacaatccctcg  793500                                                                            --------->LBD16                                                                          --------------->AtSPL3                                                              --------->ARR11(3)                                                              <---------ARR11(3)                                                          <---------ICU4--------->GLK1(2)                                                       <---------ICU4   ------------------>SPL14                                                       --------->YAB1 <---------KAN4(1)         <---------ALFIN1                           --------->YAB1--------->TOE1(1) <----------ID1   --------->TOE2(3)                                --------->REM1(1) --------->HSFB2a(1) --------DOF2              <---------GLK1(1)      ------>ZmHOX2a(1)   --------->MYB46(3)---------->DOF2   ctctatctcaaacacttccttcttccatgaaatctcccaagaacgtcttctccttcatcatcaagacctcgaacaatccgtacaagacgacaaagaagac  793600                                                                        <---------ZAT2                                                            --------->TOE2(1)                                                            --------->TOE1(1)                                                           --------------->AtSPL3                                                           <---------------AtSPL3  <---------ICU4                                                          ------>ZmHOX2a(2)        --------->YAB1                                                         <------ZmHOX2a(2)        --------->ICU4                                                        <---------ARR14(2)        <---------ATHB12                                                        --------->ARR14(2)  <---------TOE2(3)                           <---------DAG2         <---------ZAT14       <---------At4g35610                           <----------DOF2        --------->ZAT14       --------->ZAT2              --------->ANAC58                   <-----------HVH21--------->At4g35610  ---------->DOF2              --------->ANAC58                  --------->ANAC46  <---------At4g35610<---------YAB1              --------->ANAC46                  --------->bZIP60(2)  <-----------------AGL1          <-----------RAV1(2)                 <---------ALFIN1 --------->SPL7--------->YAB1   caagactcagactcagacgaaacaaatcgctttttatctcagacaagaccacttcaccgatctcgtacagctccagctatggtaatcatcaaagacttaa  793700          --------->LBD16         <---------HSFB2a(2)         --------->HSFB2a(2)                           --------->ANAC58                          ----   ------>MYB46(1)                                     --------->ANAC58                    <---------ANAC58   ------>MYB83                                      ---------->DOF2                       <---------ANAC58 <---------MYB59                              --------->YAB1    <---------ANAC58     --------->TOE1(3) --------->AtMYB61      --------->AtMYB61  --------->TOE2(3)    <---------ANAC58     --------->TOE2(3)   gaaccaaacctccagaaaccaaaaaaccatcaccagtctctaaatccataatcagacaagcgattttcttgctaatcgtctacttaaccttaggcgtttc  793800  Previous    Next  AGI:  At4g01840.1    Description:  KCO5 (Ca2+ activated outward rectifying K+ channel 5); outward rectifier potassium channel. Identical to Probable calcium-activated outward-rectifying potassium channel 5, chloroplast precursor (KCO5) [Arabidopsis Thaliana] (GB:Q9S6Z8); similar to KCO6 (CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6), outward rectifier potassium channel [Arabidopsis thaliana] (TAIR:AT4G18160.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67132.1); contains InterPro domain Potassium channel, two pore-domain; (InterPro:IPR003280); contains InterPro domain Ion transport 2 (InterPro:IPR013099) Range:  from: 793261    to: 795139    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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