Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                             -------->ATHB1                           --------->ATHB51                           <---------ICU4                           -------->HAHB4                           <---------AHL20(2)                           --------->YAB1                           <--------HAHB4                          --------->ICU4                          <---------ATHB51                          <---------YAB1                        --------->YAB1                        <---------ICU4                       <---------AHL20(2)                       --------->AHL20(2)                      <---------YAB1                                          <------ZmHOX2a(1)                    --------->ATHB51                                  --------->At4g35610                    <--------HAHB4                                    <---------At4g35610           <                    <---------ICU4                                    <---------ZAT2                <                   --------->ICU4                                     --------->ZAT2                -                   <---------YAB1                                  --------->LBD16                  < ----------->GT1 --------->YAB1      <----------DOF2              --------->ANAC46                  - -------->DOF2<----------DOF2<---------YAB1   <-----------GT1    <---------LBD16 ----------->HVH21  -   agaaagtaaacacaaactttcattattaattattaatccctttgaataaaaccagtctctgtaaatctccgtagctgagaggagtgaccatggactcatg  749500                                          ----------->GT1                                         ------>ZmHOX2a(2)                                        <------ZmHOX2a(2)                                        <---               <---------At4g35610     --------->GLK1(2)                                         ----               --------->At4g35610     --------->ARR14(3)                                    <------NtERF2         --------->ATHB12              <---------AGP1                                       ---------       <---------WOX13(1)              <---------ARR14(3)                                   ---------     --------->ATHB12                  --------->ARR11(3)                                 <---------ANAC46    <---------YAB1                     <---------ARR14(2)                                 <---------ANAC58 ---------ARR11(3)              <---------ANAC46                                   ------>NtERF2 ---- ---------ARR14(2)              <---------ANAC58                                  --------->ANAC46 -------->ARR14(3)              <---------ANAC58   ---------->DOF2                --------->ANAC58 ---------ARR14(3)         <<<<<<<<<TBF1--------->CCA1(2)                         --------->ANAC58--- -------->ARR11(3)    <---------GLK1(1)--------->ARR14(2)              ----------->TGA1   <---------ANAC58 -------->ARR14(2)    --------->GLK1(1)<---------ARR11(3)  <-----------GT1        --------->RAP2.6(2)   aagatattgattgatttagcagagatttcttcttccttgaagatctgaaaaatcaaagttttttcaagttacaatgacgagaagacgccatggctggcaa  749600                                                                                                    <                                                                                                   --                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                             <---------AHL20(2)             <--------      <-----------GT1                                       --------->AHL20(2)   --------------->AGL15 --------->AtMYB61                                        <---------ARR11(3)     <---------------AGL15 ------MYB52(2)                                           --------->ARR11(3)     <---------DAG2   --- ----->DEAR3(1)                              --------->At4g35610                 <----------DOF2 <--- >ANAC58                            ------>MYB46(1)     <---------TOE2(3)     <-----------GT1-------- >ANAC58                            ------>MYB83  <---------YAB1            <---------ANAC58<-------- ----->MYB46(3)                    <---------ALFIN1     <---------TOE1(3)   <---------ANAC58<-------- ---->GAMYB<----------DOF2  --------->YAB1   <---------At4g35610     ---------->DOF2       <---------CCA1(2)   cgaccattacaccctttacaggtttcaaaatcagaacccacttcttcagcttatttttaagatttatttgtaaaagtttcttactttatttgcaaatctt  749700 ---------MYB52(1) ------->LBD16                                                                 --------->At4g35610 >ARR14(2)                ------------>CBF                                     <---------At4g35610 ---ARR10            --------->GLK1(2)                                        --------->ALFIN1 >ARR11(3)           <---------ARR14(2)                                      <---------ZAT14        < -ARR11(1)      ----------->GT1                                              <---------ZAT18        - ------>HSFB2a(2)   <---------GLK1(2)                                        --------->ZAT18     ---- ------LBD16   --------->ALFIN1            ------>ZmHOX2a(2)                 --------->ZAT14    <---- ->HSFB2a(1)  --------->REM1(2)       <--------P                  <---------At4g35610           ----- -ARR11(3)   <---------ANAC46        <-------GAMYB                --------->At4g35610           <---- -ARR14(2)   --------->ALFIN1 <---------DAG2      <----------DOF2 --------->ZAT2     ------>ZmHOX2a(2)   ccggtatttgtttctgtgtggagaatctctcaatttttgggttgatctatcgatttatgtgtttcatgagctgaatcagtgtgctgatctatatgtttcc  749800                                                   ----------->GT1                                                   <----------ID1                                           ----------------->AGL1                                           <---------ANAC46                                           <---------ANAC58                                           <---------ANAC58                                           <---------ANAC55(2)                    ---------->ID1             --------->HSFB2a(2)           --------->ANAC55(2)                   <-------------------       --------->MYB52(2)              <---------At4g35610                  <---------DAG2     <---------MYB52(1)      <---------STY1(2) <------------CBF             <----------DOF2 ---------REM1(1)            --------->STY1(2)--------->ATHB12        <---------ICU4 -------->ALFIN1        --------->ATHB12  <-------TEIL              <---------ARR14(3) ----->LBD16 <---------HSFB2a(2)  <---------ZAT6  ----------->GT1   <---------ARR11(3)              < -----HSFB2a(2)      <---------ANAC58  <---------ZAT2               --------->ARR11(3)        <------ ---------->AGL15    <---------ANAC58  --------->At4g35610          --------->ARR14(3)     <--------- -------RAV1(2)    --------->GLK1(2)   --------->ZAT2               --------->GLK1(2) ------>ZmHOX2a(1)   aggtgtagttagtttctagagtttcttgattagctagtgtaagctgcgtaattgggaaaaactacttcaaaatcttgactttttgttcctcttcttttga  749900                                                --------->At4g35610                                                <---------ZAT2             <------NtERF2                                       --------->ARR14(2)               --------->ATERF1(1) <---------MYB46(3)                    <---------ARR14(2)      --------->ZAT14 -----ANAC81                       <---------ZAT18----------->GT1       <------NtERF2      ------>ZmHOX2a(1) ---------TOE2(3)             <----------DOF2   <---------At4g35610<-----------RAV1(1)     <---------LBD16 ---YAB1                 <---------At5g28300  <---------PCF2   <---------ZAT14     --------->ANAC55(2) -DOF2                  <-----------GT1<---------GLK1(2)      <---------ZAT6  <----------DOF2   ttttggttactaaaacttaagatgtgttactgctttgtgcagattgtgggagctgttatatatagtgttctggtggcagccttttatgtattcctcgggt  750000                                                           ---------->DOF2                                                        --------->ANAC58                                                        --------->ANAC58    <---------LBD16                                   <--------P <---------ANAC58                <----------DOF2 <-----------RAV1(1) <---------ANAC58         <---------ZAT18      ------>ZmHOX2a(1)                    <-----------GT1   ttttcttggggaatcgaatagctgttatcgcgcttctttcggttttctcctctgtggtaagtaaagctcaagaagttgcatttgtttaacttctcttctt  750100                                                                                       --------->ZAT14                                                                                       --------->ZAT18                                                                                       <---------ZAT14                                                                                     <---------------AtSPL8                                                                                    <------MYB83<----                                                                                    <---------ANAC58                                                                                    <------MYB46(1)                                                                                    <---------ANAC46                    <-------MYC3                                                    <---------ANAC55(1)                    ------->MYC3       <---------RVE1(1)         <-------GAMYB      <---------ANAC58                    <-------MYC2      --------->ARR14(2)       <---------ANAC46    --------->MYB59                    ------->MYC2      <---------ARR11(3)    <---------ARR14(2)     --------->MYB111(1)     <---------ARR11(3)               --------->ARR11(3)    --------->ARR14(2)     <---------AtMYB61     --------->GLK1(2)--------->At4g35610                 <---------DEAR3(2)       --------->MYB46(2)     <---------ARR14(2)               <---------ARR14(2)  <---------MYB46(3)       --------->MYB52(2)     --------->ARR14(2)              <------ZmHOX2a(1)   <---------DEAR3(1)        --------->MYB55(2)     --------->ARR11(3)            <---------TOE2(3) <-----------RAV1(2)          <---------MYB55(1)    <---------GLK1(2) <---------At4g35610<---------AHL20(2)<-------GAMYB         <---------MYB52(1)   gtaacagaatcttgaagaaccatgtgctgagtttattgaggattttttttgtgtttcaggcggtttcggttatagttttattcgttaggtgtactgcgat  750200                                                                          <---------TOE2(3)            --------->ZAT6                                     --------->At4g35610     --------->ANAC58                                          <---------ZAT2     --------->ANAC58                                          <---------At4g35610    <---------LBD16                  <------ZmHOX2a(1)         --------->ZAT2    --------->LBD16                 ----------->GT1        <---------REM1(1)  <---------MYB46(3) ------>ZmHOX2a(2)         ---------->DOF2    ---------->DOF2 ------->TEIL<---------TOE1(3) -----WOX13(1)    <---------ZAT6 ---------->DOF2        --------->ICU4 --------->WRKY18(1)   <-------   tgatcccacggataagactagtgctaagaaaaagagaaaggataaatccaaaggggtcttgatgaagctgagagtcaaggttgttctgagtcaagttgtt  750300                                      --------->HSFC1(2)                                      --------->HSFB2a(1)                                      <---------HSFC1(2)                                   <---------ALFIN1                                   ==================================HOX2a_HOX2a   --------->At4g35610                                   <------ZmHOX2a(1)                          <---------ZAT14                                   ===================================HOX2a_HOX2a  <---------At4g35610                                 <---------TOE1(3)                --------->AtLEC2 --------->ZAT2                                 <---------TOE2(3)             ------>ZmHOX2a(2)   <---------ZAT2                           --------->ARR11(3)                  <-------TEIL   --------->ZAT14                      ----------->GT1 <---------HSFB2a(1)     <------ZmHOX2a(2) <---------ZAT14                     ----------->GT1 <---------KAN4(2)       --------->ARR14(2) <---------At4g35610          --------->LBD16  <---------ARR11(3)                <---------ARR14(2)--------->ALFIN1        <-----------RAV1(2)--------->GLK1(2)             <---------LBD16     --------->ALFIN1        <---------LBD16<------ZmHOX2a(1)          --------->ARR11(3)   --------->DAG2     --------->MYB46(3) --MYB46(3)<------ZmHOX2a(1) --------->TOE2(3)    <---------ARR11(3)  ---------->DOF2   <<<<<<<ZML2   gtgaggtttttcaggagattagagaggaaaatcttaaggaattttcttagaagaacttatctggatccatggaaaagcagtgtgcagctagaaccacttc  750400  Previous    Next  AGI:  At4g01730.1    Description:  zinc finger (DHHC type) family protein. similar to zinc finger (DHHC type) family protein [Arabidopsis thaliana] (TAIR:AT2G33640.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40224.1); contains InterPro domain Zinc finger, DHHC-type; (InterPro:IPR001594) Range:  from: 749922    to: 752034    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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