Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ------>ZmHOX2a(2)                                                                ----------->RAV1(2)                                                           --------->HSFC1(1)                                              <----------DOF2 <<<<<<<ZML2                                   <---------ARR14(2)      <---------HSFB2a(2)        <---------GLK1(2)          --------->ARR14(2)      <---------HSFC1(1)                     <--        --------->ARR14(2)      <---------TOE2(3)          --------->HSFB2a(2)         ------->TEIL        <---------ARR14(2)      <---------TOE2(2)      <---------GLK1(1)            <---------ATHB12 ----DOF2       <---------AHL20(2)<------ZmHOX2a(1)    --------->GLK1(1)  <------ZmHOX2a(1)  <-------   tttagtctcagatttgttttaattttctatgacttaggatttgtaagtcttttttggatttctagaacctgatcgaggaaatttcaatgaatatagtgta  735400                                                   <---------HSFB2a(2)                                                 <---------LBD16                                      <------MYB83 --------->HSFB2a(2)                                      <------MYB46(1)                                     --------->MYB46(2)                               --------------->AGL15                                               <-                              <-----------------AGL1                                         <-------                              ----------------->AGL1        --------------------->WRI1     <---------MYB46(3)                              ----------------->AG<---------LBD16                    --------->LBD16                            <-----------GT1    <---------ANAC58                     --------->ANAC46    --------->MYB52(2)<---------MYB52(1)       <---------ANAC58                     --------->HSFB2a(2) -------WOX13(1)      <----------DOF2--------->MYB59     <---------ZAT14            <---------HSFB2a(2) --ZAT6          ---------->ID1<---------------AGL15    <---------ZAT6             <---------LBD16 <-   attggtttgtttggattttgttccctttgtttaccttgtttggtatttggcttcgggagtgttcttgtactcatcggcttatgtctccggaagtggtttg  735500      <------NtERF2     --------->LBD16     ------>NtERF2    <---------ATERF1(2)    <---------RAP2.3(2)    <---------RAP2.6(2)    <---------DEAR3(1)                                                                    --------->WOX13(1)    <---------RAP2.3(3)                      ------>ZmHOX2a(1)                   <---------ATHB12    --------->ATERF1(2)                  --------->ARR14(2)               --------->HSFC1(2)   --------->RAP2.6(3)                   --------->GLK1(2)                <---------At4g35610   <---------LBD16                       <---------ARR14(2)               --------->HSFB2a(1) --------ANAC58                          <---------ARR11(3)               <---------HSFC1(2)        - --ANAC46                            --------->YAB1               --------->AHL20(2)    <---------ATHB12 --------ANAC58               ------>ZmHOX2a(1)           ----------->GT1------->TEIL --------->WOX13(1)   tacttgccggctcttgtatttcaacttgaatcctatcgatgaaaatcctattgacaaaaaatgaaaaaaaaaatgaagcttccatcatccatcattcagt  735600                         <---------ANAC58                  <----------DOF2                         <---------ANAC58   --------->ANAC46                         <---------ANAC46   --------->ANAC58                        <-----------------AGL1            <---------DAG2                    --------->ANAC55(2)     --------->ANAC58      --------->ANAC58  <-----------------AGL2         <---------ZAT18 <---------WRKY12      --------->ANAC58  ----------------->AGL1--------->ZAT18          <---------WRKY38(1) <---------At4g35610<---------ANAC58 --------->ANAC58--------->At4g35610        <------------CBF --------->At4g35610<---------ANAC58 --------->ANAC58<---------At4g35610        <-------GAMYB <------NtERF2 --------->ZAT6   <----------ID1<---------ZAT18        <-----------HVH21 ---------->RAV1(1) <---------ANAC55(2)   --------->MYB52(1)        ----------->GT1            ------   ggcagcataagcatttaagactacgtgccgtttaaggccaagacaaacggcactcagttcccttttgaaatggtcaaatggcgattgagttgttttcctc  735700                            ---------->DOF2                 <------ZmHOX2a(2)                    <---------TOE2(3)           ------>ZmHOX2a(2)                   ---------->DOF2          ----------->HVH21                  <---------AHL20(2)  --------->GLK1(1)    <---------ARR11(3)             --------->At4g35610                  --------->AHL20(2)  <---------GLK1(1)---------->DOF2                    <---------At4g35610               --------->WOX13(1) XXXXXXXXXXXXXXXXXXXX>MIR1886.2                       ---------->DOF2 >ZmHOX2a(1) ------------>CBF     ----------->GT1    *TSS  --------->ARR11(3)   --------->ARR14(2)   tctctctctcattttttcaattaaagaagggaaagaggggaaatctctgatcggagagaaagatcgaatcgaagaatggcagaattcgttgaagctgata  735800                      ------>ZmHOX2a(2)                   <------ZmHOX2a(1)               <---------ANAC46      <------ZmHOX2a(1)          --------->ATHB51    ------>MYB83          <---------ICU4      ------>MYB46(1)          --------->YAB1    --------------->AGL15         <---------ATHB12  ----------------->AGL1                                     --------->TOE1(3)         --------->ICU4    ----------------->AGL2                                     --------->TOE2(3)    --------->ANAC58<---------ARR14(2)                                         --------->At4g35610    --------->ANAC58--------->ARR14(2)       ---------->DOF2           --------->ARR11(3)---------->DOF2  --------->At4g35610 ======================HOX2a_HOX2a     ----------->GT1    <---------At4g35610<--   acgcagaagcaataatcgcgaggatcgaaaccaaatcgaggaagattgaaagcctactcaaacagtaatatcagaccttggagctaaaccctaaagtctt  735900                                                                                           --------->LBD16                                                                                        ------>NtERF2                                                                                       --------->DEAR3(1)                                                                                   <-------TEIL                                                                                <---------HSFC1(2)                                                                                --------->HSFB2a(1)                                         <---------------AtSPL8    --------->MYB52(1)<---------ATERF1(1)                                       <---------ZAT14       <----------DOF2    --------->HSFC1(2)                              <---------AHL20(2)           --------->HSFC1(2)  <---------TOE2(3) --------DOF2                <----------DOF2 <-------TEIL  <---------HSFC1(2)  <---------TOE1(3)   cttttgtttttggtttaatcccttatcggtgttttaatgtgtgcaggtacaaacatgtagaagctttgaaaacggctcttgaaggttcgcctccgaaaac  736000                                                                                         <------NtERF2                                                                                         <---------At4g35610                                                                                       <---------DEAR3(1)                              --------->LBD16                                         --------->ATERF1(1)                --------->ARR11(3)                                                <---------ZAT14                <---------ARR11(3)     <----------DOF2                            --------->ZAT14            <---------AtLEC2 --------->ANAC46             <-----------GT1        ------->GAMYB      <---------TOE2(3)      --------->HSFB2a(2)        <---------WOX13(1)     <---------At4g35610      ------->TEIL       <----------DOF2<------------------------ANAC81        --------->At4g35610  -   tcgcgatgaacgttgcaaggtctctctctttccgaaaccatctttttttttttttttgatttactgagccaaaaaaaactcaactgcagtcggctaattg  736100                                       --------->ANAC55(2)                                       --------->ANAC46                                      <---------LBD16                                      <---------------------WRI1                                <---------ARR11(3)               <----------DOF2  --------->ARR11(3)      --------->ZAT14           <---------ARR14(2)      <---------ZAT14           --------->ARR14(2)      --------->ZAT18          <------ZmHOX2a(1)      <---------ZAT18        <---------TOE1(3)                          --------->ANAC46 -------->MYB52(2)           <---------TOE2(3)                        <-----------GT1        --------   gatagttgtgcacagagctttaatggccattaaggatattgacggaatgctcaatgctcttgatgtcgaatattacgacattctcatgaagtaagtgcaa  736200                                                                           --------->ZAT14                                                                           <---------ZAT14                               ----------->GT1                 <-----------RAV1(2) <------MYB83             <---------ANAC58                    ------>ZmHOX2a(1) <------MYB46(1)          <---------ANAC58                --------->ARR14(2)   <----------DOF2   <--- ->ZAT18           <----------DOF2                ---------->DOF2          <---------ZAT18       <---   agttggttttttttttttttgctgtaatgcgttttgtaatatgtatgaattggaaagctctatcctcaggctgtctgtgctctttgatagaatgtttttg  736300  Previous    Next  AGI:  At4g01710.1    Description:  CRK (CROOKED). similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G65274.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73657.1); contains InterPro domain ARP2/3 complex 16 kDa subunit (p16-Arc); (InterPro:IPR006789) Range:  from: 735753    to: 736604    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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